Abstract:Visual document retrieval aims to retrieve a set of document pages relevant to a query from visually rich collections. Existing methods often employ Vision-Language Models (VLMs) to encode queries and visual pages into a shared embedding space, which is then optimized via contrastive training. However, during visual document representation, localized evidence is usually scattered across complex document layouts, making it difficult for retrieval models to capture crucial cues for effective embedding learning. In this paper, we propose Reasoning-Guided Alignment (ReAlign), a method that enhances visual document retrieval by leveraging the reasoning capability of VLMs to provide fine-grained visual document descriptions as supervision signals for training. Specifically, ReAlign employs a superior VLM to identify query-related regions on a page and then generates a query-aware description grounding the cropped visual regions. The retriever is then trained using these region-focused descriptions to align the semantics between queries and visual documents by encouraging the document ranking distribution induced by the region-focused descriptions to match that induced by the original query. Experiments on diverse visually rich document retrieval benchmarks demonstrate that ReAlign consistently improves visual document retrieval performance on both in-domain and out-of-domain datasets, achieving up to 2% relative improvements. Moreover, the advantages of ReAlign generalize across different VLM backbones by guiding models to better focus their attention on critical visual cues for document representation. All code and datasets are available at https://github.com/NEUIR/ReAlign.
Abstract:Table structure recognition (TSR) holds widespread practical importance by parsing tabular images into structured representations, yet encounters significant challenges when processing complex layouts involving merged or empty cells. Traditional visual-centric models rely exclusively on visual information while lacking crucial semantic support, thereby impeding accurate structural recognition in complex scenarios. Vision-language models leverage contextual semantics to enhance comprehension; however, these approaches underemphasize the modeling of visual structural information. To address these limitations, this paper introduces InstructTable, an instruction-guided multi-stage training TSR framework. Meticulously designed table instruction pre-training directs attention toward fine-grained structural patterns, enhancing comprehension of complex tables. Complementary TSR fine-tuning preserves robust visual information modeling, maintaining high-precision table parsing across diverse scenarios. Furthermore, we introduce Table Mix Expand (TME), an innovative template-free method for synthesizing large-scale authentic tabular data. Leveraging TME, we construct the Balanced Complex Dense Synthetic Tables (BCDSTab) benchmark, comprising 900 complex table images synthesized through our method to serve as a rigorous benchmark. Extensive experiments on multiple public datasets (FinTabNet, PubTabNet, MUSTARD) and BCDSTab demonstrate that InstructTable achieves state-of-the-art performance in TSR tasks. Ablation studies further confirm the positive impact of the proposed tabular-data-specific instructions and synthetic data.
Abstract:Recent advances in multimodal agents have improved computer-use interaction and tool-usage, yet most existing systems remain reactive, optimizing actions in isolation without reasoning about future states or long-term goals. This limits planning coherence and prevents agents from reliably solving high-level, multi-step tasks. We introduce TraceR1, a two-stage reinforcement learning framework that explicitly trains anticipatory reasoning by forecasting short-horizon trajectories before execution. The first stage performs trajectory-level reinforcement learning with rewards that enforce global consistency across predicted action sequences. The second stage applies grounded reinforcement fine-tuning, using execution feedback from frozen tool agents to refine step-level accuracy and executability. TraceR1 is evaluated across seven benchmarks, covering online computer-use, offline computer-use benchmarks, and multimodal tool-use reasoning tasks, where it achieves substantial improvements in planning stability, execution robustness, and generalization over reactive and single-stage baselines. These results show that anticipatory trajectory reasoning is a key principle for building multimodal agents that can reason, plan, and act effectively in complex real-world environments.
Abstract:Mechanistic modeling provides a biophysically grounded framework for studying the spread of pathological tau protein in tauopathies like Alzheimer's disease. Existing approaches typically model tau propagation as a diffusive process on the brain's structural connectome, reproducing macroscopic patterns but neglecting microscale cellular transport and reaction mechanisms. The Network Transport Model (NTM) was introduced to fill this gap, explaining how region-level progression of tau emerges from microscale biophysical processes. However, the NTM faces a common challenge for complex models defined by large systems of partial differential equations: the inability to perform parameter inference and mechanistic discovery due to high computational burden and slow model simulations. To overcome this barrier, we propose Tau-BNO, a Brain Neural Operator surrogate framework for rapidly approximating NTM dynamics that captures both intra-regional reaction kinetics and inter-regional network transport. Tau-BNO combines a function operator that encodes kinetic parameters with a query operator that preserves initial state information, while approximating anisotropic transport through a spectral kernel that retains directionality. Empirical evaluations demonstrate high predictive accuracy ($R^2\approx$ 0.98) across diverse biophysical regimes and an 89\% performance improvement over state-of-the-art sequence models like Transformers and Mamba, which lack inherent structural priors. By reducing simulation time from hours to seconds, we show that the surrogate model is capable of producing new insights and generating new hypotheses. This framework is readily extensible to a broader class of connectome-based biophysical models, showcasing the transformative value of deep learning surrogates to accelerate analysis of large-scale, computationally intensive dynamical systems.
Abstract:Post-training quantization (PTQ) is widely used to compress large language models without retraining. However, many existing weight-only methods rely on heuristic objectives and greedy rounding, thus leading to noticeable degradation under low-bit quantization. In this work, we introduce OJBKQ (Objective-Joint Babai-Klein Quantization with K-Best Sampling), a layer-wise PTQ method that formulates weight quantization as a joint optimization problem over activations and weights. This formulation results in a multiple-right-hand-side box-constrained integer least squares (BILS) problem in each layer, which is NP-hard. For each column of the weight matrix, we apply an extended Babai nearest-plane algorithm and an extended version of Klein's randomized Babai algorithm to find the minimum-residual Babai-Klein point, a sub-optimal solution to the BILS problem. Experimental results on large language models show that OJBKQ achieves lower perplexity at 3-4 bits compared to existing PTQ approaches, while maintaining comparable computational cost.
Abstract:Key Information Extraction (KIE) from real-world documents remains challenging due to substantial variations in layout structures, visual quality, and task-specific information requirements. Recent Large Multimodal Models (LMMs) have shown promising potential for performing end-to-end KIE directly from document images. To enable a comprehensive and systematic evaluation across realistic and diverse application scenarios, we introduce UNIKIE-BENCH, a unified benchmark designed to rigorously evaluate the KIE capabilities of LMMs. UNIKIE-BENCH consists of two complementary tracks: a constrained-category KIE track with scenario-predefined schemas that reflect practical application needs, and an open-category KIE track that extracts any key information that is explicitly present in the document. Experiments on 15 state-of-the-art LMMs reveal substantial performance degradation under diverse schema definitions, long-tail key fields, and complex layouts, along with pronounced performance disparities across different document types and scenarios. These findings underscore persistent challenges in grounding accuracy and layout-aware reasoning for LMM-based KIE. All codes and datasets are available at https://github.com/NEUIR/UNIKIE-BENCH.
Abstract:Frontier models have demonstrated remarkable capabilities in understanding and reasoning with natural-language text, but they still exhibit major competency gaps in multimodal understanding and reasoning especially in high-value verticals such as biomedicine. Medical imaging report generation is a prominent example. Supervised fine-tuning can substantially improve performance, but they are prone to overfitting to superficial boilerplate patterns. In this paper, we introduce Universal Report Generation (UniRG) as a general framework for medical imaging report generation. By leveraging reinforcement learning as a unifying mechanism to directly optimize for evaluation metrics designed for end applications, UniRG can significantly improve upon supervised fine-tuning and attain durable generalization across diverse institutions and clinical practices. We trained UniRG-CXR on publicly available chest X-ray (CXR) data and conducted a thorough evaluation in CXR report generation with rigorous evaluation scenarios. On the authoritative ReXrank benchmark, UniRG-CXR sets new overall SOTA, outperforming prior state of the art by a wide margin.
Abstract:Model editing updates a pre-trained LLM with new facts or rules without re-training, while preserving unrelated behavior. In real deployment, edits arrive as long streams, and existing editors often face a plasticity-stability dilemma: locate-then-edit "hard writes" can accumulate interference over time, while null-space-style "hard preservation" preserves only what is explicitly constrained, so past edits can be overwritten and unconstrained behaviors may deviate, degrading general capabilities in the many-edits regime. We propose RLSEdit, a recursive least-squares editor for long sequential editing. RLSEdit formulates editing as an online quadratic optimization with soft constraints, minimizing a cumulative key-value fitting objective with two regularizers that control for both deviation from the pre-trained weights and from a designated anchor mapping. The resulting update admits an efficient online recursion via the Woodbury identity, with per-edit cost independent of history length and scaling only with the current edit size. We further provide deviation bounds and an asymptotic characterization of the adherence-preservation trade-off in the many-edits regime. Experiments on multiple model families demonstrate stable scaling to 10K edits, outperforming strong baselines in both edit success and holistic stability -- crucially retaining early edits, and preserving general capabilities on GLUE and held-out reasoning/code benchmarks.
Abstract:Equipping Large Language Models (LLMs) with external tools enables them to solve complex real-world problems. However, the robustness of existing methods remains a critical challenge when confronting novel or evolving tools. Existing trajectory-centric paradigms primarily rely on memorizing static solution paths during training, which limits the ability of LLMs to generalize tool usage to newly introduced or previously unseen tools. In this paper, we propose ToolMaster, a framework that shifts tool use from imitating golden tool-calling trajectories to actively learning tool usage through interaction with the environment. To optimize LLMs for tool planning and invocation, ToolMaster adopts a trial-and-execution paradigm, which trains LLMs to first imitate teacher-generated trajectories containing explicit tool trials and self-correction, followed by reinforcement learning to coordinate the trial and execution phases jointly. This process enables agents to autonomously explore correct tool usage by actively interacting with environments and forming experiential knowledge that benefits tool execution. Experimental results demonstrate that ToolMaster significantly outperforms existing baselines in terms of generalization and robustness across unseen or unfamiliar tools. All code and data are available at https://github.com/NEUIR/ToolMaster.
Abstract:Large Language Models (LLMs) have demonstrated remarkable reasoning capabilities, particularly in solving complex mathematical problems. Recent studies show that distilling long reasoning trajectories can effectively enhance the reasoning performance of small-scale student models. However, teacher-generated reasoning trajectories are often excessively long and structurally complex, making them difficult for student models to learn. This mismatch leads to a gap between the provided supervision signal and the learning capacity of the student model. To address this challenge, we propose Prefix-ALIGNment distillation (P-ALIGN), a framework that fully exploits teacher CoTs for distillation through adaptive prefix alignment. Specifically, P-ALIGN adaptively truncates teacher-generated reasoning trajectories by determining whether the remaining suffix is concise and sufficient to guide the student model. Then, P-ALIGN leverages the teacher-generated prefix to supervise the student model, encouraging effective prefix alignment. Experiments on multiple mathematical reasoning benchmarks demonstrate that P-ALIGN outperforms all baselines by over 3%. Further analysis indicates that the prefixes constructed by P-ALIGN provide more effective supervision signals, while avoiding the negative impact of redundant and uncertain reasoning components. All code is available at https://github.com/NEUIR/P-ALIGN.