Gaseous Object Detection

Object detection, a fundamental and challenging problem in computer vision, has experienced rapid development due to the effectiveness of deep learning. The current objects to be detected are mostly rigid solid substances with apparent and distinct visual characteristics. In this paper, we endeavor on a scarcely explored task named Gaseous Object Detection (GOD), which is undertaken to explore whether the object detection techniques can be extended from solid substances to gaseous substances. Nevertheless, the gas exhibits significantly different visual characteristics: 1) saliency deficiency, 2) arbitrary and ever-changing shapes, 3) lack of distinct boundaries. To facilitate the study on this challenging task, we construct a GOD-Video dataset comprising 600 videos (141,017 frames) that cover various attributes with multiple types of gases. A comprehensive benchmark is established based on this dataset, allowing for a rigorous evaluation of frame-level and video-level detectors. Deduced from the Gaussian dispersion model, the physics-inspired Voxel Shift Field (VSF) is designed to model geometric irregularities and ever-changing shapes in potential 3D space. By integrating VSF into Faster RCNN, the VSF RCNN serves as a simple but strong baseline for gaseous object detection. Our work aims to attract further research into this valuable albeit challenging area.

ProjectTest: A Project-level LLM Unit Test Generation Benchmark and Impact of Error Fixing Mechanisms

Unit test generation has become a promising and important use case of LLMs. However, existing evaluation benchmarks for assessing LLM unit test generation capabilities focus on function- or class-level code rather than more practical and challenging project-level codebases. To address such limitation, we propose ProjectTest, a project-level benchmark for unit test generation covering Python, Java, and JavaScript. ProjectTest features 20 moderate-sized and high-quality projects per language. We evaluate nine frontier LLMs on ProjectTest and the results show that all frontier LLMs tested exhibit moderate performance on ProjectTest on Python and Java, highlighting the difficulty of ProjectTest. We also conduct a thorough error analysis, which shows that even frontier LLMs, such as Claude-3.5-Sonnet, have significant simple errors, including compilation and cascade errors. Motivated by this observation, we further evaluate all frontier LLMs under manual error-fixing and self-error-fixing scenarios to assess their potential when equipped with error-fixing mechanisms.

ProjectTest: A Project-level Unit Test Generation Benchmark and Impact of Error Fixing Mechanisms

Unit test generation has become a promising and important use case of LLMs. However, existing evaluation benchmarks for assessing LLM unit test generation capabilities focus on function- or class-level code rather than more practical and challenging project-level codebases. To address such limitation, we propose ProjectTest, a project-level benchmark for unit test generation covering Python, Java, and JavaScript. ProjectTest features 20 moderate-sized and high-quality projects per language. We evaluate nine frontier LLMs on ProjectTest and the results show that all frontier LLMs tested exhibit moderate performance on ProjectTest on Python and Java, highlighting the difficulty of ProjectTest. We also conduct a thorough error analysis, which shows that even frontier LLMs, such as Claude-3.5-Sonnet, have significant simple errors, including compilation and cascade errors. Motivated by this observation, we further evaluate all frontier LLMs under manual error-fixing and self-error-fixing scenarios to assess their potential when equipped with error-fixing mechanisms.

Panacea: Mitigating Harmful Fine-tuning for Large Language Models via Post-fine-tuning Perturbation

Harmful fine-tuning attack introduces significant security risks to the fine-tuning services. Mainstream defenses aim to vaccinate the model such that the later harmful fine-tuning attack is less effective. However, our evaluation results show that such defenses are fragile -- with a few fine-tuning steps, the model still can learn the harmful knowledge. To this end, we do further experiment and find that an embarrassingly simple solution -- adding purely random perturbations to the fine-tuned model, can recover the model from harmful behavior, though it leads to a degradation in the model's fine-tuning performance. To address the degradation of fine-tuning performance, we further propose Panacea, which optimizes an adaptive perturbation that will be applied to the model after fine-tuning. Panacea maintains model's safety alignment performance without compromising downstream fine-tuning performance. Comprehensive experiments are conducted on different harmful ratios, fine-tuning tasks and mainstream LLMs, where the average harmful scores are reduced by up-to 21.5%, while maintaining fine-tuning performance. As a by-product, we analyze the optimized perturbation and show that different layers in various LLMs have distinct safety coefficients. Source code available at https://github.com/w-yibo/Panacea

Mulberry: Empowering MLLM with o1-like Reasoning and Reflection via Collective Monte Carlo Tree Search

In this work, we aim to develop an MLLM that understands and solves questions by learning to create each intermediate step of the reasoning involved till the final answer. To this end, we propose Collective Monte Carlo Tree Search (CoMCTS), a new learning-to-reason method for MLLMs, which introduces the concept of collective learning into ``tree search'' for effective and efficient reasoning-path searching and learning. The core idea of CoMCTS is to leverage collective knowledge from multiple models to collaboratively conjecture, search and identify effective reasoning paths toward correct answers via four iterative operations including Expansion, Simulation and Error Positioning, Backpropagation, and Selection. Using CoMCTS, we construct Mulberry-260k, a multimodal dataset with a tree of rich, explicit and well-defined reasoning nodes for each question. With Mulberry-260k, we perform collective SFT to train our model, Mulberry, a series of MLLMs with o1-like step-by-step Reasoning and Reflection capabilities. Extensive experiments demonstrate the superiority of our proposed methods on various benchmarks. Code will be available at https://github.com/HJYao00/Mulberry

MiceBoneChallenge: Micro-CT public dataset and six solutions for automatic growth plate detection in micro-CT mice bone scans

Detecting and quantifying bone changes in micro-CT scans of rodents is a common task in preclinical drug development studies. However, this task is manual, time-consuming and subject to inter- and intra-observer variability. In 2024, Anonymous Company organized an internal challenge to develop models for automatic bone quantification. We prepared and annotated a high-quality dataset of 3D $\mu$CT bone scans from $83$ mice. The challenge attracted over $80$ AI scientists from around the globe who formed $23$ teams. The participants were tasked with developing a solution to identify the plane where the bone growth happens, which is essential for fully automatic segmentation of trabecular bone. As a result, six computer vision solutions were developed that can accurately identify the location of the growth plate plane. The solutions achieved the mean absolute error of $1.91\pm0.87$ planes from the ground truth on the test set, an accuracy level acceptable for practical use by a radiologist. The annotated 3D scans dataset along with the six solutions and source code, is being made public, providing researchers with opportunities to develop and benchmark their own approaches. The code, trained models, and the data will be shared.

Knowledge Graph Based Agent for Complex, Knowledge-Intensive QA in Medicine

Biomedical knowledge is uniquely complex and structured, requiring distinct reasoning strategies compared to other scientific disciplines like physics or chemistry. Biomedical scientists do not rely on a single approach to reasoning; instead, they use various strategies, including rule-based, prototype-based, and case-based reasoning. This diversity calls for flexible approaches that accommodate multiple reasoning strategies while leveraging in-domain knowledge. We introduce KGARevion, a knowledge graph (KG) based agent designed to address the complexity of knowledge-intensive medical queries. Upon receiving a query, KGARevion generates relevant triplets by using the knowledge base of the LLM. These triplets are then verified against a grounded KG to filter out erroneous information and ensure that only accurate, relevant data contribute to the final answer. Unlike RAG-based models, this multi-step process ensures robustness in reasoning while adapting to different models of medical reasoning. Evaluations on four gold-standard medical QA datasets show that KGARevion improves accuracy by over 5.2%, outperforming 15 models in handling complex medical questions. To test its capabilities, we curated three new medical QA datasets with varying levels of semantic complexity, where KGARevion achieved a 10.4% improvement in accuracy.

Joint RGB-Spectral Decomposition Model Guided Image Enhancement in Mobile Photography

The integration of miniaturized spectrometers into mobile devices offers new avenues for image quality enhancement and facilitates novel downstream tasks. However, the broader application of spectral sensors in mobile photography is hindered by the inherent complexity of spectral images and the constraints of spectral imaging capabilities. To overcome these challenges, we propose a joint RGB-Spectral decomposition model guided enhancement framework, which consists of two steps: joint decomposition and prior-guided enhancement. Firstly, we leverage the complementarity between RGB and Low-resolution Multi-Spectral Images (Lr-MSI) to predict shading, reflectance, and material semantic priors. Subsequently, these priors are seamlessly integrated into the established HDRNet to promote dynamic range enhancement, color mapping, and grid expert learning, respectively. Additionally, we construct a high-quality Mobile-Spec dataset to support our research, and our experiments validate the effectiveness of Lr-MSI in the tone enhancement task. This work aims to establish a solid foundation for advancing spectral vision in mobile photography. The code is available at \url{https://github.com/CalayZhou/JDM-HDRNet}.

Deep Temporal Sequence Classification and Mathematical Modeling for Cell Tracking in Dense 3D Microscopy Videos of Bacterial Biofilms

Automatic cell tracking in dense environments is plagued by inaccurate correspondences and misidentification of parent-offspring relationships. In this paper, we introduce a novel cell tracking algorithm named DenseTrack, which integrates deep learning with mathematical model-based strategies to effectively establish correspondences between consecutive frames and detect cell division events in crowded scenarios. We formulate the cell tracking problem as a deep learning-based temporal sequence classification task followed by solving a constrained one-to-one matching optimization problem exploiting the classifier's confidence scores. Additionally, we present an eigendecomposition-based cell division detection strategy that leverages knowledge of cellular geometry. The performance of the proposed approach has been evaluated by tracking densely packed cells in 3D time-lapse image sequences of bacterial biofilm development. The experimental results on simulated as well as experimental fluorescence image sequences suggest that the proposed tracking method achieves superior performance in terms of both qualitative and quantitative evaluation measures compared to recent state-of-the-art cell tracking approaches.

LLMs Assist NLP Researchers: Critique Paper (Meta-)Reviewing

This work is motivated by two key trends. On one hand, large language models (LLMs) have shown remarkable versatility in various generative tasks such as writing, drawing, and question answering, significantly reducing the time required for many routine tasks. On the other hand, researchers, whose work is not only time-consuming but also highly expertise-demanding, face increasing challenges as they have to spend more time reading, writing, and reviewing papers. This raises the question: how can LLMs potentially assist researchers in alleviating their heavy workload? This study focuses on the topic of LLMs assist NLP Researchers, particularly examining the effectiveness of LLM in assisting paper (meta-)reviewing and its recognizability. To address this, we constructed the ReviewCritique dataset, which includes two types of information: (i) NLP papers (initial submissions rather than camera-ready) with both human-written and LLM-generated reviews, and (ii) each review comes with "deficiency" labels and corresponding explanations for individual segments, annotated by experts. Using ReviewCritique, this study explores two threads of research questions: (i) "LLMs as Reviewers", how do reviews generated by LLMs compare with those written by humans in terms of quality and distinguishability? (ii) "LLMs as Metareviewers", how effectively can LLMs identify potential issues, such as Deficient or unprofessional review segments, within individual paper reviews? To our knowledge, this is the first work to provide such a comprehensive analysis.