TokenSelect: Efficient Long-Context Inference and Length Extrapolation for LLMs via Dynamic Token-Level KV Cache Selection

With the development of large language models (LLMs), the ability to handle longer contexts has become a key capability for Web applications such as cross-document understanding and LLM-powered search systems. However, this progress faces two major challenges: performance degradation due to sequence lengths out-of-distribution, and excessively long inference times caused by the quadratic computational complexity of attention. These issues hinder the application of LLMs in long-context scenarios. In this paper, we propose Dynamic Token-Level KV Cache Selection (TokenSelect), a model-agnostic, training-free method for efficient and accurate long-context inference. TokenSelect builds upon the observation of non-contiguous attention sparsity, using Query-Key dot products to measure per-head KV Cache criticality at token-level. By per-head soft voting mechanism, TokenSelect selectively involves a small number of critical KV cache tokens in the attention calculation without sacrificing accuracy. To further accelerate TokenSelect, we designed the Selection Cache based on observations of consecutive Query similarity and implemented efficient dot product kernel, significantly reducing the overhead of token selection. A comprehensive evaluation of TokenSelect demonstrates up to 23.84x speedup in attention computation and up to 2.28x acceleration in end-to-end latency, while providing superior performance compared to state-of-the-art long-context inference methods.

IRS-Enhanced Secure Semantic Communication Networks: Cross-Layer and Context-Awared Resource Allocation

Learning-task oriented semantic communication is pivotal in optimizing transmission efficiency by extracting and conveying essential semantics tailored to specific tasks, such as image reconstruction and classification. Nevertheless, the challenge of eavesdropping poses a formidable threat to semantic privacy due to the open nature of wireless communications. In this paper, intelligent reflective surface (IRS)-enhanced secure semantic communication (IRS-SSC) is proposed to guarantee the physical layer security from a task-oriented semantic perspective. Specifically, a multi-layer codebook is exploited to discretize continuous semantic features and describe semantics with different numbers of bits, thereby meeting the need for hierarchical semantic representation and further enhancing the transmission efficiency. Novel semantic security metrics, i.e., secure semantic rate (S-SR) and secure semantic spectrum efficiency (S-SSE), are defined to map the task-oriented security requirements at the application layer into the physical layer. To achieve artificial intelligence (AI)-native secure communication, we propose a noise disturbance enhanced hybrid deep reinforcement learning (NdeHDRL)-based resource allocation scheme. This scheme dynamically maximizes the S-SSE by jointly optimizing the bits for semantic representations, reflective coefficients of the IRS, and the subchannel assignment. Moreover, we propose a novel semantic context awared state space (SCA-SS) to fusion the high-dimensional semantic space and the observable system state space, which enables the agent to perceive semantic context and solves the dimensional catastrophe problem. Simulation results demonstrate the efficiency of our proposed schemes in both enhancing the security performance and the S-SSE compared to several benchmark schemes.

Bridge-IF: Learning Inverse Protein Folding with Markov Bridges

Inverse protein folding is a fundamental task in computational protein design, which aims to design protein sequences that fold into the desired backbone structures. While the development of machine learning algorithms for this task has seen significant success, the prevailing approaches, which predominantly employ a discriminative formulation, frequently encounter the error accumulation issue and often fail to capture the extensive variety of plausible sequences. To fill these gaps, we propose Bridge-IF, a generative diffusion bridge model for inverse folding, which is designed to learn the probabilistic dependency between the distributions of backbone structures and protein sequences. Specifically, we harness an expressive structure encoder to propose a discrete, informative prior derived from structures, and establish a Markov bridge to connect this prior with native sequences. During the inference stage, Bridge-IF progressively refines the prior sequence, culminating in a more plausible design. Moreover, we introduce a reparameterization perspective on Markov bridge models, from which we derive a simplified loss function that facilitates more effective training. We also modulate protein language models (PLMs) with structural conditions to precisely approximate the Markov bridge process, thereby significantly enhancing generation performance while maintaining parameter-efficient training. Extensive experiments on well-established benchmarks demonstrate that Bridge-IF predominantly surpasses existing baselines in sequence recovery and excels in the design of plausible proteins with high foldability. The code is available at https://github.com/violet-sto/Bridge-IF.

Enhancing binary classification: A new stacking method via leveraging computational geometry

Stacking, a potent ensemble learning method, leverages a meta-model to harness the strengths of multiple base models, thereby enhancing prediction accuracy. Traditional stacking techniques typically utilize established learning models, such as logistic regression, as the meta-model. This paper introduces a novel approach that integrates computational geometry techniques, specifically solving the maximum weighted rectangle problem, to develop a new meta-model for binary classification. Our method is evaluated on multiple open datasets, with statistical analysis showing its stability and demonstrating improvements in accuracy compared to current state-of-the-art stacking methods with out-of-fold predictions. This new stacking method also boasts two significant advantages: enhanced interpretability and the elimination of hyperparameter tuning for the meta-model, thus increasing its practicality. These merits make our method highly applicable not only in stacking ensemble learning but also in various real-world applications, such as hospital health evaluation scoring and bank credit scoring systems, offering a fresh evaluation perspective.

Multi-diseases detection with memristive system on chip

This study presents the first implementation of multilayer neural networks on a memristor/CMOS integrated system on chip (SoC) to simultaneously detect multiple diseases. To overcome limitations in medical data, generative AI techniques are used to enhance the dataset, improving the classifier's robustness and diversity. The system achieves notable performance with low latency, high accuracy (91.82%), and energy efficiency, facilitated by end-to-end execution on a memristor-based SoC with ten 256x256 crossbar arrays and an integrated on-chip processor. This research showcases the transformative potential of memristive in-memory computing hardware in accelerating machine learning applications for medical diagnostics.

Measuring Spiritual Values and Bias of Large Language Models

Large language models (LLMs) have become integral tool for users from various backgrounds. LLMs, trained on vast corpora, reflect the linguistic and cultural nuances embedded in their pre-training data. However, the values and perspectives inherent in this data can influence the behavior of LLMs, leading to potential biases. As a result, the use of LLMs in contexts involving spiritual or moral values necessitates careful consideration of these underlying biases. Our work starts with verification of our hypothesis by testing the spiritual values of popular LLMs. Experimental results show that LLMs' spiritual values are quite diverse, as opposed to the stereotype of atheists or secularists. We then investigate how different spiritual values affect LLMs in social-fairness scenarios e.g., hate speech identification). Our findings reveal that different spiritual values indeed lead to different sensitivity to different hate target groups. Furthermore, we propose to continue pre-training LLMs on spiritual texts, and empirical results demonstrate the effectiveness of this approach in mitigating spiritual bias.

Honest AI: Fine-Tuning "Small" Language Models to Say "I Don't Know", and Reducing Hallucination in RAG

Hallucination is a key roadblock for applications of Large Language Models (LLMs), particularly for enterprise applications that are sensitive to information accuracy. To address this issue, two general approaches have been explored: Retrieval-Augmented Generation (RAG) to supply LLMs with updated information as context, and fine-tuning the LLMs with new information and desired output styles. In this paper, we propose Honest AI: a novel strategy to fine-tune "small" language models to say "I don't know" to reduce hallucination, along with several alternative RAG approaches. The solution ranked 1st in Task 2 for the false premise question. The alternative approaches include using RAG with search engine and knowledge graph results, fine-tuning base LLMs with new information and combinations of both approaches. Although all approaches improve the performance of the LLMs, RAG alone does not significantly improve the performance and fine-tuning is needed for better results. Finally, the hybrid approach achieved the highest score in the CRAG benchmark. In addition, our approach emphasizes the use of relatively small models with fewer than 10 billion parameters, promoting resource efficiency.

LoTLIP: Improving Language-Image Pre-training for Long Text Understanding

Understanding long text is of great demands in practice but beyond the reach of most language-image pre-training (LIP) models. In this work, we empirically confirm that the key reason causing such an issue is that the training images are usually paired with short captions, leaving certain tokens easily overshadowed by salient tokens. Towards this problem, our initial attempt is to relabel the data with long captions, however, directly learning with which may lead to performance degradation in understanding short text (e.g., in the image classification task). Then, after incorporating corner tokens to aggregate diverse textual information, we manage to help the model catch up to its original level of short text understanding yet greatly enhance its capability of long text understanding. We further look into whether the model can continuously benefit from longer captions and notice a clear trade-off between the performance and the efficiency. Finally, we validate the effectiveness of our approach using a self-constructed large-scale dataset, which consists of 100M long caption oriented text-image pairs. It is noteworthy that, on the task of long-text image retrieval, we beat the competitor using long captions with 11.1% improvement (i.e., from 72.62% to 83.72%). We will release the code, the model, and the new dataset to facilitate the reproducibility and further research. The project page is available at https://wuw2019.github.io/lotlip.

Structure-Enhanced Protein Instruction Tuning: Towards General-Purpose Protein Understanding

Proteins, as essential biomolecules, play a central role in biological processes, including metabolic reactions and DNA replication. Accurate prediction of their properties and functions is crucial in biological applications. Recent development of protein language models (pLMs) with supervised fine tuning provides a promising solution to this problem. However, the fine-tuned model is tailored for particular downstream prediction task, and achieving general-purpose protein understanding remains a challenge. In this paper, we introduce Structure-Enhanced Protein Instruction Tuning (SEPIT) framework to bridge this gap. Our approach integrates a noval structure-aware module into pLMs to inform them with structural knowledge, and then connects these enhanced pLMs to large language models (LLMs) to generate understanding of proteins. In this framework, we propose a novel two-stage instruction tuning pipeline that first establishes a basic understanding of proteins through caption-based instructions and then refines this understanding using a mixture of experts (MoEs) to learn more complex properties and functional information with the same amount of activated parameters. Moreover, we construct the largest and most comprehensive protein instruction dataset to date, which allows us to train and evaluate the general-purpose protein understanding model. Extensive experimental results on open-ended generation and closed-set answer tasks demonstrate the superior performance of SEPIT over both closed-source general LLMs and open-source LLMs trained with protein knowledge.

Efficient Long-range Language Modeling with Self-supervised Causal Retrieval

Recently, retrieval-based language models (RLMs) have received much attention. However, most of them leverage a pre-trained retriever with fixed parameters, which may not adapt well to causal language models. In this work, we propose Grouped Cross-Attention, a novel module enabling joint pre-training of the retriever and causal LM, and apply it to long-context modeling. For a given input sequence, we split it into chunks and use the current chunk to retrieve past chunks for subsequent text generation. Our innovation allows the retriever to learn how to retrieve past chunks that better minimize the auto-regressive loss of subsequent tokens in an end-to-end manner. By integrating top-$k$ retrieval, our model can be pre-trained efficiently from scratch with context lengths up to 64K tokens. Our experiments show our model, compared with long-range LM baselines, can achieve lower perplexity with comparable or lower pre-training and inference costs.