Towards a Comprehensive Benchmark for Pathological Lymph Node Metastasis in Breast Cancer Sections

Advances in optical microscopy scanning have significantly contributed to computational pathology (CPath) by converting traditional histopathological slides into whole slide images (WSIs). This development enables comprehensive digital reviews by pathologists and accelerates AI-driven diagnostic support for WSI analysis. Recent advances in foundational pathology models have increased the need for benchmarking tasks. The Camelyon series is one of the most widely used open-source datasets in computational pathology. However, the quality, accessibility, and clinical relevance of the labels have not been comprehensively evaluated. In this study, we reprocessed 1,399 WSIs and labels from the Camelyon-16 and Camelyon-17 datasets, removing low-quality slides, correcting erroneous labels, and providing expert pixel annotations for tumor regions in the previously unreleased test set. Based on the sizes of re-annotated tumor regions, we upgraded the binary cancer screening task to a four-class task: negative, micro-metastasis, macro-metastasis, and Isolated Tumor Cells (ITC). We reevaluated pre-trained pathology feature extractors and multiple instance learning (MIL) methods using the cleaned dataset, providing a benchmark that advances AI development in histopathology.

Independent Feature Enhanced Crossmodal Fusion for Match-Mismatch Classification of Speech Stimulus and EEG Response

It is crucial for auditory attention decoding to classify matched and mismatched speech stimuli with corresponding EEG responses by exploring their relationship. However, existing methods often adopt two independent networks to encode speech stimulus and EEG response, which neglect the relationship between these signals from the two modalities. In this paper, we propose an independent feature enhanced crossmodal fusion model (IFE-CF) for match-mismatch classification, which leverages the fusion feature of the speech stimulus and the EEG response to achieve auditory EEG decoding. Specifically, our IFE-CF contains a crossmodal encoder to encode the speech stimulus and the EEG response with a two-branch structure connected via crossmodal attention mechanism in the encoding process, a multi-channel fusion module to fuse features of two modalities by aggregating the interaction feature obtained from the crossmodal encoder and the independent feature obtained from the speech stimulus and EEG response, and a predictor to give the matching result. In addition, the causal mask is introduced to consider the time delay of the speech-EEG pair in the crossmodal encoder, which further enhances the feature representation for match-mismatch classification. Experiments demonstrate our method's effectiveness with better classification accuracy, as compared with the baseline of the Auditory EEG Decoding Challenge 2023.

2D-TPE: Two-Dimensional Positional Encoding Enhances Table Understanding for Large Language Models

Tables are ubiquitous across various domains for concisely representing structured information. Empowering large language models (LLMs) to reason over tabular data represents an actively explored direction. However, since typical LLMs only support one-dimensional~(1D) inputs, existing methods often flatten the two-dimensional~(2D) table structure into a sequence of tokens, which can severely disrupt the spatial relationships and result in an inevitable loss of vital contextual information. In this paper, we first empirically demonstrate the detrimental impact of such flattening operations on the performance of LLMs in capturing the spatial information of tables through two elaborate proxy tasks. Subsequently, we introduce a simple yet effective positional encoding method, termed ``2D-TPE'' (Two-Dimensional Table Positional Encoding), to address this challenge. 2D-TPE enables each attention head to dynamically select a permutation order of tokens within the context for attending to them, where each permutation represents a distinct traversal mode for the table, such as column-wise or row-wise traversal. 2D-TPE effectively mitigates the risk of losing essential spatial information while preserving computational efficiency, thus better preserving the table structure. Extensive experiments across five benchmarks demonstrate that 2D-TPE outperforms strong baselines, underscoring the importance of preserving the table structure for accurate table comprehension. Comprehensive analysis further reveals the substantially better scalability of 2D-TPE to large tables than baselines.

Detection of Sleep Apnea-Hypopnea Events Using Millimeter-wave Radar and Pulse Oximeter

Obstructive Sleep Apnea-Hypopnea Syndrome (OSAHS) is a sleep-related breathing disorder associated with significant morbidity and mortality worldwide. The gold standard for OSAHS diagnosis, polysomnography (PSG), faces challenges in popularization due to its high cost and complexity. Recently, radar has shown potential in detecting sleep apnea-hypopnea events (SAE) with the advantages of low cost and non-contact monitoring. However, existing studies, especially those using deep learning, employ segment-based classification approach for SAE detection, making the task of event quantity estimation difficult. Additionally, radar-based SAE detection is susceptible to interference from body movements and the environment. Oxygen saturation (SpO2) can offer valuable information about OSAHS, but it also has certain limitations and cannot be used alone for diagnosis. In this study, we propose a method using millimeter-wave radar and pulse oximeter to detect SAE, called ROSA. It fuses information from both sensors, and directly predicts the temporal localization of SAE. Experimental results demonstrate a high degree of consistency (ICC=0.9864) between AHI from ROSA and PSG. This study presents an effective method with low-load device for the diagnosis of OSAHS.

Mixture-of-Modules: Reinventing Transformers as Dynamic Assemblies of Modules

Is it always necessary to compute tokens from shallow to deep layers in Transformers? The continued success of vanilla Transformers and their variants suggests an undoubted "yes". In this work, however, we attempt to break the depth-ordered convention by proposing a novel architecture dubbed mixture-of-modules (MoM), which is motivated by an intuition that any layer, regardless of its position, can be used to compute a token as long as it possesses the needed processing capabilities. The construction of MoM starts from a finite set of modules defined by multi-head attention and feed-forward networks, each distinguished by its unique parameterization. Two routers then iteratively select attention modules and feed-forward modules from the set to process a token. The selection dynamically expands the computation graph in the forward pass of the token, culminating in an assembly of modules. We show that MoM provides not only a unified framework for Transformers and their numerous variants but also a flexible and learnable approach for reducing redundancy in Transformer parameterization. We pre-train various MoMs using OpenWebText. Empirical results demonstrate that MoMs, of different parameter counts, consistently outperform vanilla transformers on both GLUE and XSUM benchmarks. More interestingly, with a fixed parameter budget, MoM-large enables an over 38% increase in depth for computation graphs compared to GPT-2-large, resulting in absolute gains of 1.4 on GLUE and 1 on XSUM. On the other hand, MoM-large also enables an over 60% reduction in depth while involving more modules per layer, yielding a 16% reduction in TFLOPs and a 43% decrease in memory usage compared to GPT-2-large, while maintaining comparable performance.

A Reference-free Metric for Language-Queried Audio Source Separation using Contrastive Language-Audio Pretraining

Language-queried audio source separation (LASS) aims to separate an audio source guided by a text query, with the signal-to-distortion ratio (SDR)-based metrics being commonly used to objectively measure the quality of the separated audio. However, the SDR-based metrics require a reference signal, which is often difficult to obtain in real-world scenarios. In addition, with the SDR-based metrics, the content information of the text query is not considered effectively in LASS. This paper introduces a reference-free evaluation metric using a contrastive language-audio pretraining (CLAP) module, termed CLAPScore, which measures the semantic similarity between the separated audio and the text query. Unlike SDR, the proposed CLAPScore metric evaluates the quality of the separated audio based on the content information of the text query, without needing a reference signal. Experimental results show that the CLAPScore metric provides an effective evaluation of the semantic relevance of the separated audio to the text query, as compared to the SDR metric, offering an alternative for the performance evaluation of LASS systems.

From the Least to the Most: Building a Plug-and-Play Visual Reasoner via Data Synthesis

We explore multi-step reasoning in vision-language models (VLMs). The problem is challenging, as reasoning data consisting of multiple steps of visual and language processing are barely available. To overcome the challenge, we first introduce a least-to-most visual reasoning paradigm, which interleaves steps of decomposing a question into sub-questions and invoking external tools for resolving sub-questions. Based on the paradigm, we further propose a novel data synthesis approach that can automatically create questions and multi-step reasoning paths for an image in a bottom-up manner. Our approach divides the complex synthesis task into a few simple sub-tasks, and (almost entirely) relies on open-sourced models to accomplish the sub-tasks. Therefore, the entire synthesis process is reproducible and cost-efficient, and the synthesized data is quality guaranteed. With the approach, we construct $50$k visual reasoning examples. Then, we develop a visual reasoner through supervised fine-tuning, which is capable of generally enhancing the reasoning abilities of a wide range of existing VLMs in a plug-and-play fashion. Extensive experiments indicate that the visual reasoner can consistently and significantly improve four VLMs on four VQA benchmarks. Our code and dataset are available at https://github.com/steven-ccq/VisualReasoner.

FastDrag: Manipulate Anything in One Step

Drag-based image editing using generative models provides precise control over image contents, enabling users to manipulate anything in an image with a few clicks. However, prevailing methods typically adopt $n$-step iterations for latent semantic optimization to achieve drag-based image editing, which is time-consuming and limits practical applications. In this paper, we introduce a novel one-step drag-based image editing method, i.e., FastDrag, to accelerate the editing process. Central to our approach is a latent warpage function (LWF), which simulates the behavior of a stretched material to adjust the location of individual pixels within the latent space. This innovation achieves one-step latent semantic optimization and hence significantly promotes editing speeds. Meanwhile, null regions emerging after applying LWF are addressed by our proposed bilateral nearest neighbor interpolation (BNNI) strategy. This strategy interpolates these regions using similar features from neighboring areas, thus enhancing semantic integrity. Additionally, a consistency-preserving strategy is introduced to maintain the consistency between the edited and original images by adopting semantic information from the original image, saved as key and value pairs in self-attention module during diffusion inversion, to guide the diffusion sampling. Our FastDrag is validated on the DragBench dataset, demonstrating substantial improvements in processing time over existing methods, while achieving enhanced editing performance.

SISP: A Benchmark Dataset for Fine-grained Ship Instance Segmentation in Panchromatic Satellite Images

Fine-grained ship instance segmentation in satellite images holds considerable significance for monitoring maritime activities at sea. However, existing datasets often suffer from the scarcity of fine-grained information or pixel-wise localization annotations, as well as the insufficient image diversity and variations, thus limiting the research of this task. To this end, we propose a benchmark dataset for fine-grained Ship Instance Segmentation in Panchromatic satellite images, namely SISP, which contains 56,693 well-annotated ship instances with four fine-grained categories across 10,000 sliced images, and all the images are collected from SuperView-1 satellite with the resolution of 0.5m. Targets in the proposed SISP dataset have characteristics that are consistent with real satellite scenes, such as high class imbalance, various scenes, large variations in target densities and scales, and high inter-class similarity and intra-class diversity, all of which make the SISP dataset more suitable for real-world applications. In addition, we introduce a Dynamic Feature Refinement-assist Instance segmentation network, namely DFRInst, as the benchmark method for ship instance segmentation in satellite images, which can fortify the explicit representation of crucial features, thus improving the performance of ship instance segmentation. Experiments and analysis are performed on the proposed SISP dataset to evaluate the benchmark method and several state-of-the-art methods to establish baselines for facilitating future research. The proposed dataset and source codes will be available at: https://github.com/Justlovesmile/SISP.

AMOR: A Recipe for Building Adaptable Modular Knowledge Agents Through Process Feedback

The notable success of large language models (LLMs) has sparked an upsurge in building language agents to complete various complex tasks. We present AMOR, an agent framework based on open-source LLMs, which reasons with external knowledge bases and adapts to specific domains through human supervision to the reasoning process. AMOR builds reasoning logic over a finite state machine (FSM) that solves problems through autonomous executions and transitions over disentangled modules. This allows humans to provide direct feedback to the individual modules, and thus naturally forms process supervision. Based on this reasoning and feedback framework, we develop AMOR through two-stage fine-tuning: warm-up and adaptation. The former fine-tunes the LLM with examples automatically constructed from various public datasets and enables AMOR to generalize across different knowledge environments, while the latter tailors AMOR to specific domains using process feedback. Extensive experiments across multiple domains demonstrate the advantage of AMOR to strong baselines, thanks to its FSM-based reasoning and process feedback mechanism.