Endo3R: Unified Online Reconstruction from Dynamic Monocular Endoscopic Video

Reconstructing 3D scenes from monocular surgical videos can enhance surgeon's perception and therefore plays a vital role in various computer-assisted surgery tasks. However, achieving scale-consistent reconstruction remains an open challenge due to inherent issues in endoscopic videos, such as dynamic deformations and textureless surfaces. Despite recent advances, current methods either rely on calibration or instrument priors to estimate scale, or employ SfM-like multi-stage pipelines, leading to error accumulation and requiring offline optimization. In this paper, we present Endo3R, a unified 3D foundation model for online scale-consistent reconstruction from monocular surgical video, without any priors or extra optimization. Our model unifies the tasks by predicting globally aligned pointmaps, scale-consistent video depths, and camera parameters without any offline optimization. The core contribution of our method is expanding the capability of the recent pairwise reconstruction model to long-term incremental dynamic reconstruction by an uncertainty-aware dual memory mechanism. The mechanism maintains history tokens of both short-term dynamics and long-term spatial consistency. Notably, to tackle the highly dynamic nature of surgical scenes, we measure the uncertainty of tokens via Sampson distance and filter out tokens with high uncertainty. Regarding the scarcity of endoscopic datasets with ground-truth depth and camera poses, we further devise a self-supervised mechanism with a novel dynamics-aware flow loss. Abundant experiments on SCARED and Hamlyn datasets demonstrate our superior performance in zero-shot surgical video depth prediction and camera pose estimation with online efficiency. Project page: https://wrld.github.io/Endo3R/.

pFedFair: Towards Optimal Group Fairness-Accuracy Trade-off in Heterogeneous Federated Learning

Federated learning (FL) algorithms commonly aim to maximize clients' accuracy by training a model on their collective data. However, in several FL applications, the model's decisions should meet a group fairness constraint to be independent of sensitive attributes such as gender or race. While such group fairness constraints can be incorporated into the objective function of the FL optimization problem, in this work, we show that such an approach would lead to suboptimal classification accuracy in an FL setting with heterogeneous client distributions. To achieve an optimal accuracy-group fairness trade-off, we propose the Personalized Federated Learning for Client-Level Group Fairness (pFedFair) framework, where clients locally impose their fairness constraints over the distributed training process. Leveraging the image embedding models, we extend the application of pFedFair to computer vision settings, where we numerically show that pFedFair achieves an optimal group fairness-accuracy trade-off in heterogeneous FL settings. We present the results of several numerical experiments on benchmark and synthetic datasets, which highlight the suboptimality of non-personalized FL algorithms and the improvements made by the pFedFair method.

WonderVerse: Extendable 3D Scene Generation with Video Generative Models

We introduce \textit{WonderVerse}, a simple but effective framework for generating extendable 3D scenes. Unlike existing methods that rely on iterative depth estimation and image inpainting, often leading to geometric distortions and inconsistencies, WonderVerse leverages the powerful world-level priors embedded within video generative foundation models to create highly immersive and geometrically coherent 3D environments. Furthermore, we propose a new technique for controllable 3D scene extension to substantially increase the scale of the generated environments. Besides, we introduce a novel abnormal sequence detection module that utilizes camera trajectory to address geometric inconsistency in the generated videos. Finally, WonderVerse is compatible with various 3D reconstruction methods, allowing both efficient and high-quality generation. Extensive experiments on 3D scene generation demonstrate that our WonderVerse, with an elegant and simple pipeline, delivers extendable and highly-realistic 3D scenes, markedly outperforming existing works that rely on more complex architectures.

Towards Universal Learning-based Model for Cardiac Image Reconstruction: Summary of the CMRxRecon2024 Challenge

Cardiovascular magnetic resonance (CMR) offers diverse imaging contrasts for assessment of cardiac function and tissue characterization. However, acquiring each single CMR modality is often time-consuming, and comprehensive clinical protocols require multiple modalities with various sampling patterns, further extending the overall acquisition time and increasing susceptibility to motion artifacts. Existing deep learning-based reconstruction methods are often designed for specific acquisition parameters, which limits their ability to generalize across a variety of scan scenarios. As part of the CMRxRecon Series, the CMRxRecon2024 challenge provides diverse datasets encompassing multi-modality multi-view imaging with various sampling patterns, and a platform for the international community to develop and benchmark reconstruction solutions in two well-crafted tasks. Task 1 is a modality-universal setting, evaluating the out-of-distribution generalization of the reconstructed model, while Task 2 follows sampling-universal setting assessing the one-for-all adaptability of the universal model. Main contributions include providing the first and largest publicly available multi-modality, multi-view cardiac k-space dataset; developing a benchmarking platform that simulates clinical acceleration protocols, with a shared code library and tutorial for various k-t undersampling patterns and data processing; giving technical insights of enhanced data consistency based on physic-informed networks and adaptive prompt-learning embedding to be versatile to different clinical settings; additional finding on evaluation metrics to address the limitations of conventional ground-truth references in universal reconstruction tasks.

Diffusion Stabilizer Policy for Automated Surgical Robot Manipulations

Intelligent surgical robots have the potential to revolutionize clinical practice by enabling more precise and automated surgical procedures. However, the automation of such robot for surgical tasks remains under-explored compared to recent advancements in solving household manipulation tasks. These successes have been largely driven by (1) advanced models, such as transformers and diffusion models, and (2) large-scale data utilization. Aiming to extend these successes to the domain of surgical robotics, we propose a diffusion-based policy learning framework, called Diffusion Stabilizer Policy (DSP), which enables training with imperfect or even failed trajectories. Our approach consists of two stages: first, we train the diffusion stabilizer policy using only clean data. Then, the policy is continuously updated using a mixture of clean and perturbed data, with filtering based on the prediction error on actions. Comprehensive experiments conducted in various surgical environments demonstrate the superior performance of our method in perturbation-free settings and its robustness when handling perturbed demonstrations.

AnyCharV: Bootstrap Controllable Character Video Generation with Fine-to-Coarse Guidance

Character video generation is a significant real-world application focused on producing high-quality videos featuring specific characters. Recent advancements have introduced various control signals to animate static characters, successfully enhancing control over the generation process. However, these methods often lack flexibility, limiting their applicability and making it challenging for users to synthesize a source character into a desired target scene. To address this issue, we propose a novel framework, AnyCharV, that flexibly generates character videos using arbitrary source characters and target scenes, guided by pose information. Our approach involves a two-stage training process. In the first stage, we develop a base model capable of integrating the source character with the target scene using pose guidance. The second stage further bootstraps controllable generation through a self-boosting mechanism, where we use the generated video in the first stage and replace the fine mask with the coarse one, enabling training outcomes with better preservation of character details. Experimental results demonstrate the effectiveness and robustness of our proposed method. Our project page is https://anycharv.github.io.

Is Segment Anything Model 2 All You Need for Surgery Video Segmentation? A Systematic Evaluation

Surgery video segmentation is an important topic in the surgical AI field. It allows the AI model to understand the spatial information of a surgical scene. Meanwhile, due to the lack of annotated surgical data, surgery segmentation models suffer from limited performance. With the emergence of SAM2 model, a large foundation model for video segmentation trained on natural videos, zero-shot surgical video segmentation became more realistic but meanwhile remains to be explored. In this paper, we systematically evaluate the performance of SAM2 model in zero-shot surgery video segmentation task. We conducted experiments under different configurations, including different prompting strategies, robustness, etc. Moreover, we conducted an empirical evaluation over the performance, including 9 datasets with 17 different types of surgeries.

A Super-pixel-based Approach to the Stable Interpretation of Neural Networks

Saliency maps are widely used in the computer vision community for interpreting neural network classifiers. However, due to the randomness of training samples and optimization algorithms, the resulting saliency maps suffer from a significant level of stochasticity, making it difficult for domain experts to capture the intrinsic factors that influence the neural network's decision. In this work, we propose a novel pixel partitioning strategy to boost the stability and generalizability of gradient-based saliency maps. Through both theoretical analysis and numerical experiments, we demonstrate that the grouping of pixels reduces the variance of the saliency map and improves the generalization behavior of the interpretation method. Furthermore, we propose a sensible grouping strategy based on super-pixels which cluster pixels into groups that align well with the semantic meaning of the images. We perform several numerical experiments on CIFAR-10 and ImageNet. Our empirical results suggest that the super-pixel-based interpretation maps consistently improve the stability and quality over the pixel-based saliency maps.

Local Superior Soups: A Catalyst for Model Merging in Cross-Silo Federated Learning

Federated learning (FL) is a learning paradigm that enables collaborative training of models using decentralized data. Recently, the utilization of pre-trained weight initialization in FL has been demonstrated to effectively improve model performance. However, the evolving complexity of current pre-trained models, characterized by a substantial increase in parameters, markedly intensifies the challenges associated with communication rounds required for their adaptation to FL. To address these communication cost issues and increase the performance of pre-trained model adaptation in FL, we propose an innovative model interpolation-based local training technique called ``Local Superior Soups.'' Our method enhances local training across different clients, encouraging the exploration of a connected low-loss basin within a few communication rounds through regularized model interpolation. This approach acts as a catalyst for the seamless adaptation of pre-trained models in in FL. We demonstrated its effectiveness and efficiency across diverse widely-used FL datasets. Our code is available at \href{https://github.com/ubc-tea/Local-Superior-Soups}{https://github.com/ubc-tea/Local-Superior-Soups}.

UC-NeRF: Uncertainty-aware Conditional Neural Radiance Fields from Endoscopic Sparse Views

Visualizing surgical scenes is crucial for revealing internal anatomical structures during minimally invasive procedures. Novel View Synthesis is a vital technique that offers geometry and appearance reconstruction, enhancing understanding, planning, and decision-making in surgical scenes. Despite the impressive achievements of Neural Radiance Field (NeRF), its direct application to surgical scenes produces unsatisfying results due to two challenges: endoscopic sparse views and significant photometric inconsistencies. In this paper, we propose uncertainty-aware conditional NeRF for novel view synthesis to tackle the severe shape-radiance ambiguity from sparse surgical views. The core of UC-NeRF is to incorporate the multi-view uncertainty estimation to condition the neural radiance field for modeling the severe photometric inconsistencies adaptively. Specifically, our UC-NeRF first builds a consistency learner in the form of multi-view stereo network, to establish the geometric correspondence from sparse views and generate uncertainty estimation and feature priors. In neural rendering, we design a base-adaptive NeRF network to exploit the uncertainty estimation for explicitly handling the photometric inconsistencies. Furthermore, an uncertainty-guided geometry distillation is employed to enhance geometry learning. Experiments on the SCARED and Hamlyn datasets demonstrate our superior performance in rendering appearance and geometry, consistently outperforming the current state-of-the-art approaches. Our code will be released at \url{https://github.com/wrld/UC-NeRF}.