Machine Learning Analysis of Anomalous Diffusion

The rapid advancements in machine learning have made its application to anomalous diffusion analysis both essential and inevitable. This review systematically introduces the integration of machine learning techniques for enhanced analysis of anomalous diffusion, focusing on two pivotal aspects: single trajectory characterization via machine learning and representation learning of anomalous diffusion. We extensively compare various machine learning methods, including both classical machine learning and deep learning, used for the inference of diffusion parameters and trajectory segmentation. Additionally, platforms such as the Anomalous Diffusion Challenge that serve as benchmarks for evaluating these methods are highlighted. On the other hand, we outline three primary strategies for representing anomalous diffusion: the combination of predefined features, the feature vector from the penultimate layer of neural network, and the latent representation from the autoencoder, analyzing their applicability across various scenarios. This investigation paves the way for future research, offering valuable perspectives that can further enrich the study of anomalous diffusion and advance the application of artificial intelligence in statistical physics and biophysics.

Number Cookbook: Number Understanding of Language Models and How to Improve It

Large language models (LLMs) can solve an increasing number of complex reasoning tasks while making surprising mistakes in basic numerical understanding and processing (such as 9.11 > 9.9). The latter ability is essential for tackling complex arithmetic and mathematical problems and serves as a foundation for most reasoning tasks, but previous work paid little attention to it or only discussed several restricted tasks (like integer addition). In this paper, we comprehensively investigate the numerical understanding and processing ability (NUPA) of LLMs. Firstly, we introduce a benchmark covering four common numerical representations and 17 distinct numerical tasks in four major categories, resulting in 41 meaningful combinations in total. These tasks are derived from primary and secondary education curricula, encompassing nearly all everyday numerical understanding and processing scenarios, and the rules of these tasks are very simple and clear. Through the benchmark, we find that current LLMs fail frequently in many of the tasks. To study the problem, we train small models with existing and potential techniques for enhancing NUPA (such as special tokenizers, PEs, and number formats), comprehensively evaluating their effectiveness using our testbed. We also finetune practical-scale LLMs on our proposed NUPA tasks and find that 1) naive finetuning can improve NUPA a lot on many but not all tasks, and 2) surprisingly, techniques designed to enhance NUPA prove ineffective for finetuning pretrained models. We further explore the impact of chain-of-thought techniques on NUPA. Our work takes a preliminary step towards understanding and improving NUPA of LLMs. Our benchmark and code are released at https://github.com/GraphPKU/number_cookbook.

Enhancing Whole Slide Pathology Foundation Models through Stain Normalization

Recent advancements in digital pathology have led to the development of numerous foundational models that utilize self-supervised learning on patches extracted from gigapixel whole slide images (WSIs). While this approach leverages vast amounts of unlabeled data, we have discovered a significant issue: features extracted from these self-supervised models tend to cluster by individual WSIs, a phenomenon we term WSI-specific feature collapse. This problem can potentially limit the model's generalization ability and performance on various downstream tasks. To address this issue, we introduce Stain Normalized Pathology Foundational Model, a novel foundational model trained on patches that have undergone stain normalization. Stain normalization helps reduce color variability arising from different laboratories and scanners, enabling the model to learn more consistent features. Stain Normalized Pathology Foundational Model is trained using 285,153,903 patches extracted from a total of 34,795 WSIs, combining data from The Cancer Genome Atlas (TCGA) and the Genotype-Tissue Expression (GTEx) project. Our experiments demonstrate that Stain Normalized Pathology Foundational Model significantly mitigates the feature collapse problem, indicating that the model has learned more generalized features rather than overfitting to individual WSI characteristics. We compared Stain Normalized Pathology Foundational Model with state-of-the-art models across six downstream task datasets, and our results show that Stain Normalized Pathology Foundational Model achieves excellent performance relative to the number of WSIs used and the model's parameter count. This suggests that the application of stain normalization has substantially improved the model's efficiency and generalization capabilities.

Applying Fine-Tuned LLMs for Reducing Data Needs in Load Profile Analysis

This paper presents a novel method for utilizing fine-tuned Large Language Models (LLMs) to minimize data requirements in load profile analysis, demonstrated through the restoration of missing data in power system load profiles. A two-stage fine-tuning strategy is proposed to adapt a pre-trained LLMs, i.e., GPT-3.5, for missing data restoration tasks. Through empirical evaluation, we demonstrate the effectiveness of the fine-tuned model in accurately restoring missing data, achieving comparable performance to state-of-the-art specifically designed models such as BERT-PIN. Key findings include the importance of prompt engineering and the optimal utilization of fine-tuning samples, highlighting the efficiency of few-shot learning in transferring knowledge from general user cases to specific target users. Furthermore, the proposed approach demonstrates notable cost-effectiveness and time efficiency compared to training models from scratch, making it a practical solution for scenarios with limited data availability and computing resources. This research has significant potential for application to other power system load profile analysis tasks. Consequently, it advances the use of LLMs in power system analytics, offering promising implications for enhancing the resilience and efficiency of power distribution systems.

An Element-Wise Weights Aggregation Method for Federated Learning

Federated learning (FL) is a powerful Machine Learning (ML) paradigm that enables distributed clients to collaboratively learn a shared global model while keeping the data on the original device, thereby preserving privacy. A central challenge in FL is the effective aggregation of local model weights from disparate and potentially unbalanced participating clients. Existing methods often treat each client indiscriminately, applying a single proportion to the entire local model. However, it is empirically advantageous for each weight to be assigned a specific proportion. This paper introduces an innovative Element-Wise Weights Aggregation Method for Federated Learning (EWWA-FL) aimed at optimizing learning performance and accelerating convergence speed. Unlike traditional FL approaches, EWWA-FL aggregates local weights to the global model at the level of individual elements, thereby allowing each participating client to make element-wise contributions to the learning process. By taking into account the unique dataset characteristics of each client, EWWA-FL enhances the robustness of the global model to different datasets while also achieving rapid convergence. The method is flexible enough to employ various weighting strategies. Through comprehensive experiments, we demonstrate the advanced capabilities of EWWA-FL, showing significant improvements in both accuracy and convergence speed across a range of backbones and benchmarks.

CoRAST: Towards Foundation Model-Powered Correlated Data Analysis in Resource-Constrained CPS and IoT

Foundation models (FMs) emerge as a promising solution to harness distributed and diverse environmental data by leveraging prior knowledge to understand the complicated temporal and spatial correlations within heterogeneous datasets. Unlike distributed learning frameworks such as federated learning, which often struggle with multimodal data, FMs can transform diverse inputs into embeddings. This process facilitates the integration of information from various modalities and the application of prior learning to new domains. However, deploying FMs in resource-constrained edge systems poses significant challenges. To this end, we introduce CoRAST, a novel learning framework that utilizes FMs for enhanced analysis of distributed, correlated heterogeneous data. Utilizing a server-based FM, CoRAST can exploit existing environment information to extract temporal, spatial, and cross-modal correlations among sensor data. This enables CoRAST to offer context-aware insights for localized client tasks through FM-powered global representation learning. Our evaluation on real-world weather dataset demonstrates CoRAST's ability to exploit correlated heterogeneous data through environmental representation learning to reduce the forecast errors by up to 50.3% compared to the baselines.

Case-Based or Rule-Based: How Do Transformers Do the Math?

Despite the impressive performance in a variety of complex tasks, modern large language models (LLMs) still have trouble dealing with some math problems that are simple and intuitive for humans, such as addition. While we can easily learn basic rules of addition and apply them to new problems of any length, LLMs struggle to do the same. Instead, they may rely on similar "cases" seen in the training corpus for help. We define these two different reasoning mechanisms as "rule-based reasoning" and "case-based reasoning". Since rule-based reasoning is essential for acquiring the systematic generalization ability, we aim to explore exactly whether transformers use rule-based or case-based reasoning for math problems. Through carefully designed intervention experiments on five math tasks, we confirm that transformers are performing case-based reasoning, no matter whether scratchpad is used, which aligns with the previous observations that transformers use subgraph matching/shortcut learning to reason. To mitigate such problems, we propose a Rule-Following Fine-Tuning (RFFT) technique to teach transformers to perform rule-based reasoning. Specifically, we provide explicit rules in the input and then instruct transformers to recite and follow the rules step by step. Through RFFT, we successfully enable LLMs fine-tuned on 1-5 digit addition to generalize to up to 12-digit addition with over 95% accuracy, which is over 40% higher than scratchpad. The significant improvement demonstrates that teaching LLMs to explicitly use rules helps them learn rule-based reasoning and generalize better in length.

InstructEdit: Instruction-based Knowledge Editing for Large Language Models

Knowledge editing for large language models can offer an efficient solution to alter a model's behavior without negatively impacting the overall performance. However, the current approach encounters issues with limited generalizability across tasks, necessitating one distinct editor for each task, which significantly hinders the broader applications. To address this, we take the first step to analyze the multi-task generalization issue in knowledge editing. Specifically, we develop an instruction-based editing technique, termed InstructEdit, which facilitates the editor's adaptation to various task performances simultaneously using simple instructions. With only one unified editor for each LLM, we empirically demonstrate that InstructEdit can improve the editor's control, leading to an average 14.86% increase in Reliability in multi-task editing setting. Furthermore, experiments involving holdout unseen task illustrate that InstructEdit consistently surpass previous strong baselines. To further investigate the underlying mechanisms of instruction-based knowledge editing, we analyze the principal components of the editing gradient directions, which unveils that instructions can help control optimization direction with stronger OOD generalization. Code and datasets will be available in https://github.com/zjunlp/EasyEdit.

Metacognition-Enhanced Few-Shot Prompting With Positive Reinforcement

Few-shot prompting elicits the remarkable abilities of large language models by equipping them with a few demonstration examples in the input. However, the traditional method of providing large language models with all demonstration input-output pairs at once may not effectively guide large language models to learn the specific input-output mapping relationship. In this paper, inspired by the regulatory and supportive role of metacognition in students' learning, we propose a novel metacognition-enhanced few-shot prompting, which guides large language models to reflect on their thought processes to comprehensively learn the given demonstration examples. Furthermore, considering that positive reinforcement can improve students' learning motivation, we introduce positive reinforcement into our metacognition-enhanced few-shot prompting to promote the few-shot learning of large language models by providing response-based positive feedback. The experimental results on two real-world datasets show that our metacognition-enhanced few-shot prompting with positive reinforcement surpasses traditional few-shot prompting in classification accuracy and macro F1.

BERT-PIN: A BERT-based Framework for Recovering Missing Data Segments in Time-series Load Profiles

Inspired by the success of the Transformer model in natural language processing and computer vision, this paper introduces BERT-PIN, a Bidirectional Encoder Representations from Transformers (BERT) powered Profile Inpainting Network. BERT-PIN recovers multiple missing data segments (MDSs) using load and temperature time-series profiles as inputs. To adopt a standard Transformer model structure for profile inpainting, we segment the load and temperature profiles into line segments, treating each segment as a word and the entire profile as a sentence. We incorporate a top candidates selection process in BERT-PIN, enabling it to produce a sequence of probability distributions, based on which users can generate multiple plausible imputed data sets, each reflecting different confidence levels. We develop and evaluate BERT-PIN using real-world dataset for two applications: multiple MDSs recovery and demand response baseline estimation. Simulation results show that BERT-PIN outperforms the existing methods in accuracy while is capable of restoring multiple MDSs within a longer window. BERT-PIN, served as a pre-trained model, can be fine-tuned for conducting many downstream tasks, such as classification and super resolution.