MolGround: A Benchmark for Molecular Grounding

Current molecular understanding approaches predominantly focus on the descriptive aspect of human perception, providing broad, topic-level insights. However, the referential aspect -- linking molecular concepts to specific structural components -- remains largely unexplored. To address this gap, we propose a molecular grounding benchmark designed to evaluate a model's referential abilities. We align molecular grounding with established conventions in NLP, cheminformatics, and molecular science, showcasing the potential of NLP techniques to advance molecular understanding within the AI for Science movement. Furthermore, we constructed the largest molecular understanding benchmark to date, comprising 79k QA pairs, and developed a multi-agent grounding prototype as proof of concept. This system outperforms existing models, including GPT-4o, and its grounding outputs have been integrated to enhance traditional tasks such as molecular captioning and ATC (Anatomical, Therapeutic, Chemical) classification.

Pi-GPS: Enhancing Geometry Problem Solving by Unleashing the Power of Diagrammatic Information

Geometry problem solving has garnered increasing attention due to its potential applications in intelligent education field. Inspired by the observation that text often introduces ambiguities that diagrams can clarify, this paper presents Pi-GPS, a novel framework that unleashes the power of diagrammatic information to resolve textual ambiguities, an aspect largely overlooked in prior research. Specifically, we design a micro module comprising a rectifier and verifier: the rectifier employs MLLMs to disambiguate text based on the diagrammatic context, while the verifier ensures the rectified output adherence to geometric rules, mitigating model hallucinations. Additionally, we explore the impact of LLMs in theorem predictor based on the disambiguated formal language. Empirical results demonstrate that Pi-GPS surpasses state-of-the-art models, achieving a nearly 10\% improvement on Geometry3K over prior neural-symbolic approaches. We hope this work highlights the significance of resolving textual ambiguity in multimodal mathematical reasoning, a crucial factor limiting performance.

Less or More: Towards Glanceable Explanations for LLM Recommendations Using Ultra-Small Devices

Large Language Models (LLMs) have shown remarkable potential in recommending everyday actions as personal AI assistants, while Explainable AI (XAI) techniques are being increasingly utilized to help users understand why a recommendation is given. Personal AI assistants today are often located on ultra-small devices such as smartwatches, which have limited screen space. The verbosity of LLM-generated explanations, however, makes it challenging to deliver glanceable LLM explanations on such ultra-small devices. To address this, we explored 1) spatially structuring an LLM's explanation text using defined contextual components during prompting and 2) presenting temporally adaptive explanations to users based on confidence levels. We conducted a user study to understand how these approaches impacted user experiences when interacting with LLM recommendations and explanations on ultra-small devices. The results showed that structured explanations reduced users' time to action and cognitive load when reading an explanation. Always-on structured explanations increased users' acceptance of AI recommendations. However, users were less satisfied with structured explanations compared to unstructured ones due to their lack of sufficient, readable details. Additionally, adaptively presenting structured explanations was less effective at improving user perceptions of the AI compared to the always-on structured explanations. Together with users' interview feedback, the results led to design implications to be mindful of when personalizing the content and timing of LLM explanations that are displayed on ultra-small devices.

GNN-Coder: Boosting Semantic Code Retrieval with Combined GNNs and Transformer

Code retrieval is a crucial component in modern software development, particularly in large-scale projects. However, existing approaches relying on sequence-based models often fail to fully exploit the structural dependencies inherent in code, leading to suboptimal retrieval performance, particularly with structurally complex code fragments. In this paper, we introduce GNN-Coder, a novel framework based on Graph Neural Network (GNN) to utilize Abstract Syntax Tree (AST). We make the first attempt to study how GNN-integrated Transformer can promote the development of semantic retrieval tasks by capturing the structural and semantic features of code. We further propose an innovative graph pooling method tailored for AST, utilizing the number of child nodes as a key feature to highlight the intrinsic topological relationships within the AST. This design effectively integrates both sequential and hierarchical representations, enhancing the model's ability to capture code structure and semantics. Additionally, we introduce the Mean Angular Margin (MAM), a novel metric for quantifying the uniformity of code embedding distributions, providing a standardized measure of feature separability. The proposed method achieves a lower MAM, indicating a more discriminative feature representation. This underscores GNN-Coder's superior ability to distinguish between code snippets, thereby enhancing retrieval accuracy. Experimental results show that GNN-Coder significantly boosts retrieval performance, with a 1\%-10\% improvement in MRR on the CSN dataset, and a notable 20\% gain in zero-shot performance on the CosQA dataset.

Ultra-High-Frequency Harmony: mmWave Radar and Event Camera Orchestrate Accurate Drone Landing

For precise, efficient, and safe drone landings, ground platforms should real-time, accurately locate descending drones and guide them to designated spots. While mmWave sensing combined with cameras improves localization accuracy, the lower sampling frequency of traditional frame cameras compared to mmWave radar creates bottlenecks in system throughput. In this work, we replace the traditional frame camera with event camera, a novel sensor that harmonizes in sampling frequency with mmWave radar within the ground platform setup, and introduce mmE-Loc, a high-precision, low-latency ground localization system designed for drone landings. To fully leverage the \textit{temporal consistency} and \textit{spatial complementarity} between these modalities, we propose two innovative modules, \textit{consistency-instructed collaborative tracking} and \textit{graph-informed adaptive joint optimization}, for accurate drone measurement extraction and efficient sensor fusion. Extensive real-world experiments in landing scenarios from a leading drone delivery company demonstrate that mmE-Loc outperforms state-of-the-art methods in both localization accuracy and latency.

MagicGeo: Training-Free Text-Guided Geometric Diagram Generation

Geometric diagrams are critical in conveying mathematical and scientific concepts, yet traditional diagram generation methods are often manual and resource-intensive. While text-to-image generation has made strides in photorealistic imagery, creating accurate geometric diagrams remains a challenge due to the need for precise spatial relationships and the scarcity of geometry-specific datasets. This paper presents MagicGeo, a training-free framework for generating geometric diagrams from textual descriptions. MagicGeo formulates the diagram generation process as a coordinate optimization problem, ensuring geometric correctness through a formal language solver, and then employs coordinate-aware generation. The framework leverages the strong language translation capability of large language models, while formal mathematical solving ensures geometric correctness. We further introduce MagicGeoBench, a benchmark dataset of 220 geometric diagram descriptions, and demonstrate that MagicGeo outperforms current methods in both qualitative and quantitative evaluations. This work provides a scalable, accurate solution for automated diagram generation, with significant implications for educational and academic applications.

Graph Pseudotime Analysis and Neural Stochastic Differential Equations for Analyzing Retinal Degeneration Dynamics and Beyond

Understanding disease progression at the molecular pathway level usually requires capturing both structural dependencies between pathways and the temporal dynamics of disease evolution. In this work, we solve the former challenge by developing a biologically informed graph-forming method to efficiently construct pathway graphs for subjects from our newly curated JR5558 mouse transcriptomics dataset. We then develop Graph-level Pseudotime Analysis (GPA) to infer graph-level trajectories that reveal how disease progresses at the population level, rather than in individual subjects. Based on the trajectories estimated by GPA, we identify the most sensitive pathways that drive disease stage transitions. In addition, we measure changes in pathway features using neural stochastic differential equations (SDEs), which enables us to formally define and compute pathway stability and disease bifurcation points (points of no return), two fundamental problems in disease progression research. We further extend our theory to the case when pathways can interact with each other, enabling a more comprehensive and multi-faceted characterization of disease phenotypes. The comprehensive experimental results demonstrate the effectiveness of our framework in reconstructing the dynamics of the pathway, identifying critical transitions, and providing novel insights into the mechanistic understanding of disease evolution.

LessLeak-Bench: A First Investigation of Data Leakage in LLMs Across 83 Software Engineering Benchmarks

Large Language Models (LLMs) are widely utilized in software engineering (SE) tasks, such as code generation and automated program repair. However, their reliance on extensive and often undisclosed pre-training datasets raises significant concerns about data leakage, where the evaluation benchmark data is unintentionally ``seen'' by LLMs during the model's construction phase. The data leakage issue could largely undermine the validity of LLM-based research and evaluations. Despite the increasing use of LLMs in the SE community, there is no comprehensive study that assesses the extent of data leakage in SE benchmarks for LLMs yet. To address this gap, this paper presents the first large-scale analysis of data leakage in 83 SE benchmarks concerning LLMs. Our results show that in general, data leakage in SE benchmarks is minimal, with average leakage ratios of only 4.8\%, 2.8\%, and 0.7\% for Python, Java, and C/C++ benchmarks, respectively. However, some benchmarks exhibit relatively higher leakage ratios, which raises concerns about their bias in evaluation. For instance, QuixBugs and BigCloneBench have leakage ratios of 100.0\% and 55.7\%, respectively. Furthermore, we observe that data leakage has a substantial impact on LLM evaluation. We also identify key causes of high data leakage, such as the direct inclusion of benchmark data in pre-training datasets and the use of coding platforms like LeetCode for benchmark construction. To address the data leakage, we introduce \textbf{LessLeak-Bench}, a new benchmark that removes leaked samples from the 83 SE benchmarks, enabling more reliable LLM evaluations in future research. Our study enhances the understanding of data leakage in SE benchmarks and provides valuable insights for future research involving LLMs in SE.

Process-Supervised Reinforcement Learning for Code Generation

Existing reinforcement learning strategies based on outcome supervision have proven effective in enhancing the performance of large language models(LLMs) for code generation. While reinforcement learning based on process supervision has shown great promise in handling multi-step reasoning tasks, its effectiveness in code generation remains largely underexplored and underjustified. The primary obstacle stems from the resource-intensive nature of constructing high-quality process-supervised data, which demands substantial human expertise and computational resources. In response to this challenge, we propose a "statement mutation/refactoring-compile and execution verification" strategy: mutating and refactoring code line-by-line through a teacher model, and utilizing compiler execution results to automatically label each line, resulting in line-by-line process-supervised data, which is pivotal for training a process-supervised reward model. The trained reward model is then integrated into the PRLCoder framework, followed by experimental validation on several benchmarks. Experimental results demonstrate that process-supervised reinforcement learning significantly surpasses methods relying solely on outcome supervision. Notably, in tackling complex code generation tasks, process-supervised reinforcement learning shows a clear advantage, ensuring both the integrity of the code generation process and the correctness of the generation results.

TACLR: A Scalable and Efficient Retrieval-based Method for Industrial Product Attribute Value Identification

Product Attribute Value Identification (PAVI) involves identifying attribute values from product profiles, a key task for improving product search, recommendations, and business analytics on e-commerce platforms. However, existing PAVI methods face critical challenges, such as inferring implicit values, handling out-of-distribution (OOD) values, and producing normalized outputs. To address these limitations, we introduce Taxonomy-Aware Contrastive Learning Retrieval (TACLR), the first retrieval-based method for PAVI. TACLR formulates PAVI as an information retrieval task by encoding product profiles and candidate values into embeddings and retrieving values based on their similarity to the item embedding. It leverages contrastive training with taxonomy-aware hard negative sampling and employs adaptive inference with dynamic thresholds. TACLR offers three key advantages: (1) it effectively handles implicit and OOD values while producing normalized outputs; (2) it scales to thousands of categories, tens of thousands of attributes, and millions of values; and (3) it supports efficient inference for high-load industrial scenarios. Extensive experiments on proprietary and public datasets validate the effectiveness and efficiency of TACLR. Moreover, it has been successfully deployed in a real-world e-commerce platform, processing millions of product listings daily while supporting dynamic, large-scale attribute taxonomies.