End-to-End Ontology Learning with Large Language Models

Ontologies are useful for automatic machine processing of domain knowledge as they represent it in a structured format. Yet, constructing ontologies requires substantial manual effort. To automate part of this process, large language models (LLMs) have been applied to solve various subtasks of ontology learning. However, this partial ontology learning does not capture the interactions between subtasks. We address this gap by introducing OLLM, a general and scalable method for building the taxonomic backbone of an ontology from scratch. Rather than focusing on subtasks, like individual relations between entities, we model entire subcomponents of the target ontology by finetuning an LLM with a custom regulariser that reduces overfitting on high-frequency concepts. We introduce a novel suite of metrics for evaluating the quality of the generated ontology by measuring its semantic and structural similarity to the ground truth. In contrast to standard metrics, our metrics use deep learning techniques to define more robust distance measures between graphs. Both our quantitative and qualitative results on Wikipedia show that OLLM outperforms subtask composition methods, producing more semantically accurate ontologies while maintaining structural integrity. We further demonstrate that our model can be effectively adapted to new domains, like arXiv, needing only a small number of training examples. Our source code and datasets are available at https://github.com/andylolu2/ollm.

Shallow Diffuse: Robust and Invisible Watermarking through Low-Dimensional Subspaces in Diffusion Models

The widespread use of AI-generated content from diffusion models has raised significant concerns regarding misinformation and copyright infringement. Watermarking is a crucial technique for identifying these AI-generated images and preventing their misuse. In this paper, we introduce Shallow Diffuse, a new watermarking technique that embeds robust and invisible watermarks into diffusion model outputs. Unlike existing approaches that integrate watermarking throughout the entire diffusion sampling process, Shallow Diffuse decouples these steps by leveraging the presence of a low-dimensional subspace in the image generation process. This method ensures that a substantial portion of the watermark lies in the null space of this subspace, effectively separating it from the image generation process. Our theoretical and empirical analyses show that this decoupling strategy greatly enhances the consistency of data generation and the detectability of the watermark. Extensive experiments further validate that our Shallow Diffuse outperforms existing watermarking methods in terms of robustness and consistency. The codes will be released at https://github.com/liwd190019/Shallow-Diffuse.

Learning a Mini-batch Graph Transformer via Two-stage Interaction Augmentation

Mini-batch Graph Transformer (MGT), as an emerging graph learning model, has demonstrated significant advantages in semi-supervised node prediction tasks with improved computational efficiency and enhanced model robustness. However, existing methods for processing local information either rely on sampling or simple aggregation, which respectively result in the loss and squashing of critical neighbor information.Moreover, the limited number of nodes in each mini-batch restricts the model's capacity to capture the global characteristic of the graph. In this paper, we propose LGMformer, a novel MGT model that employs a two-stage augmented interaction strategy, transitioning from local to global perspectives, to address the aforementioned bottlenecks.The local interaction augmentation (LIA) presents a neighbor-target interaction Transformer (NTIformer) to acquire an insightful understanding of the co-interaction patterns between neighbors and the target node, resulting in a locally effective token list that serves as input for the MGT. In contrast, global interaction augmentation (GIA) adopts a cross-attention mechanism to incorporate entire graph prototypes into the target node epresentation, thereby compensating for the global graph information to ensure a more comprehensive perception. To this end, LGMformer achieves the enhancement of node representations under the MGT paradigm.Experimental results related to node classification on the ten benchmark datasets demonstrate the effectiveness of the proposed method. Our code is available at https://github.com/l-wd/LGMformer.

Repurposing Language Models into Embedding Models: Finding the Compute-Optimal Recipe

Text embeddings are essential for many tasks, such as document retrieval, clustering, and semantic similarity assessment. In this paper, we study how to contrastively train text embedding models in a compute-optimal fashion, given a suite of pre-trained decoder-only language models. Our innovation is an algorithm that produces optimal configurations of model sizes, data quantities, and fine-tuning methods for text-embedding models at different computational budget levels. The resulting recipe, which we obtain through extensive experiments, can be used by practitioners to make informed design choices for their embedding models. Specifically, our findings suggest that full fine-tuning and low-rank adaptation fine-tuning produce optimal models at lower and higher computational budgets respectively.

DeepSeek-Prover: Advancing Theorem Proving in LLMs through Large-Scale Synthetic Data

Proof assistants like Lean have revolutionized mathematical proof verification, ensuring high accuracy and reliability. Although large language models (LLMs) show promise in mathematical reasoning, their advancement in formal theorem proving is hindered by a lack of training data. To address this issue, we introduce an approach to generate extensive Lean 4 proof data derived from high-school and undergraduate-level mathematical competition problems. This approach involves translating natural language problems into formal statements, filtering out low-quality statements, and generating proofs to create synthetic data. After fine-tuning the DeepSeekMath 7B model on this synthetic dataset, which comprises 8 million formal statements with proofs, our model achieved whole-proof generation accuracies of 46.3% with 64 samples and 52% cumulatively on the Lean 4 miniF2F test, surpassing the baseline GPT-4 at 23.0% with 64 samples and a tree search reinforcement learning method at 41.0%. Additionally, our model successfully proved 5 out of 148 problems in the Lean 4 Formalized International Mathematical Olympiad (FIMO) benchmark, while GPT-4 failed to prove any. These results demonstrate the potential of leveraging large-scale synthetic data to enhance theorem-proving capabilities in LLMs. Both the synthetic dataset and the model will be made available to facilitate further research in this promising field.

Proving Theorems Recursively

Recent advances in automated theorem proving leverages language models to explore expanded search spaces by step-by-step proof generation. However, such approaches are usually based on short-sighted heuristics (e.g., log probability or value function scores) that potentially lead to suboptimal or even distracting subgoals, preventing us from finding longer proofs. To address this challenge, we propose POETRY (PrOvE Theorems RecursivelY), which proves theorems in a recursive, level-by-level manner in the Isabelle theorem prover. Unlike previous step-by-step methods, POETRY searches for a verifiable sketch of the proof at each level and focuses on solving the current level's theorem or conjecture. Detailed proofs of intermediate conjectures within the sketch are temporarily replaced by a placeholder tactic called sorry, deferring their proofs to subsequent levels. This approach allows the theorem to be tackled incrementally by outlining the overall theorem at the first level and then solving the intermediate conjectures at deeper levels. Experiments are conducted on the miniF2F and PISA datasets and significant performance gains are observed in our POETRY approach over state-of-the-art methods. POETRY on miniF2F achieves an average proving success rate improvement of 5.1%. Moreover, we observe a substantial increase in the maximum proof length found by POETRY, from 10 to 26.

Don't Trust: Verify -- Grounding LLM Quantitative Reasoning with Autoformalization

Large language models (LLM), such as Google's Minerva and OpenAI's GPT families, are becoming increasingly capable of solving mathematical quantitative reasoning problems. However, they still make unjustified logical and computational errors in their reasoning steps and answers. In this paper, we leverage the fact that if the training corpus of LLMs contained sufficiently many examples of formal mathematics (e.g. in Isabelle, a formal theorem proving environment), they can be prompted to translate i.e. autoformalize informal mathematical statements into formal Isabelle code -- which can be verified automatically for internal consistency. This provides a mechanism to automatically reject solutions whose formalized versions are inconsistent within themselves or with the formalized problem statement. We evaluate our method on GSM8K, MATH and MultiArith datasets and demonstrate that our approach provides a consistently better heuristic than vanilla majority voting -- the previously best method to identify correct answers, by more than 12% on GSM8K. In our experiments it improves results consistently across all datasets and LLM model sizes. The code can be found at https://github.com/jinpz/dtv.

Multilingual Mathematical Autoformalization

Autoformalization is the task of translating natural language materials into machine-verifiable formalisations. Progress in autoformalization research is hindered by the lack of a sizeable dataset consisting of informal-formal pairs expressing the same essence. Existing methods tend to circumvent this challenge by manually curating small corpora or using few-shot learning with large language models. But these methods suffer from data scarcity and formal language acquisition difficulty. In this work, we create $\texttt{MMA}$, a large, flexible, multilingual, and multi-domain dataset of informal-formal pairs, by using a language model to translate in the reverse direction, that is, from formal mathematical statements into corresponding informal ones. Experiments show that language models fine-tuned on $\texttt{MMA}$ produce $16-18\%$ of statements acceptable with minimal corrections on the $\texttt{miniF2F}$ and $\texttt{ProofNet}$ benchmarks, up from $0\%$ with the base model. We demonstrate that fine-tuning on multilingual formal data results in more capable autoformalization models even when deployed on monolingual tasks.

Message-passing selection: Towards interpretable GNNs for graph classification

In this paper, we strive to develop an interpretable GNNs' inference paradigm, termed MSInterpreter, which can serve as a plug-and-play scheme readily applicable to various GNNs' baselines. Unlike the most existing explanation methods, MSInterpreter provides a Message-passing Selection scheme(MSScheme) to select the critical paths for GNNs' message aggregations, which aims at reaching the self-explaination instead of post-hoc explanations. In detail, the elaborate MSScheme is designed to calculate weight factors of message aggregation paths by considering the vanilla structure and node embedding components, where the structure base aims at weight factors among node-induced substructures; on the other hand, the node embedding base focuses on weight factors via node embeddings obtained by one-layer GNN.Finally, we demonstrate the effectiveness of our approach on graph classification benchmarks.

Evaluating Language Models for Mathematics through Interactions

The standard methodology of evaluating large language models (LLMs) based on static pairs of inputs and outputs is insufficient for developing assistants: this kind of assessments fails to take into account the essential interactive element in their deployment, and therefore limits how we understand language model capabilities. We introduce CheckMate, an adaptable prototype platform for humans to interact with and evaluate LLMs. We conduct a study with CheckMate to evaluate three language models~(InstructGPT, ChatGPT, and GPT-4) as assistants in proving undergraduate-level mathematics, with a mixed cohort of participants from undergraduate students to professors of mathematics. We release the resulting interaction and rating dataset, MathConverse. By analysing MathConverse, we derive a preliminary taxonomy of human behaviours and uncover that despite a generally positive correlation, there are notable instances of divergence between correctness and perceived helpfulness in LLM generations, amongst other findings. Further, we identify useful scenarios and existing issues of GPT-4 in mathematical reasoning through a series of case studies contributed by expert mathematicians. We conclude with actionable takeaways for ML practitioners and mathematicians: models which communicate uncertainty, respond well to user corrections, are more interpretable and concise may constitute better assistants; interactive evaluation is a promising way to continually navigate the capability of these models; humans should be aware of language models' algebraic fallibility, and for that reason discern where they should be used.