Harvard University
Abstract:Tumor is a leading cause of death worldwide, with an estimated 10 million deaths attributed to tumor-related diseases every year. AI-driven tumor recognition unlocks new possibilities for more precise and intelligent tumor screening and diagnosis. However, the progress is heavily hampered by the scarcity of annotated datasets, which demands extensive annotation efforts by radiologists. To tackle this challenge, we introduce FreeTumor, an innovative Generative AI (GAI) framework to enable large-scale tumor synthesis for mitigating data scarcity. Specifically, FreeTumor effectively leverages a combination of limited labeled data and large-scale unlabeled data for tumor synthesis training. Unleashing the power of large-scale data, FreeTumor is capable of synthesizing a large number of realistic tumors on images for augmenting training datasets. To this end, we create the largest training dataset for tumor synthesis and recognition by curating 161,310 publicly available Computed Tomography (CT) volumes from 33 sources, with only 2.3% containing annotated tumors. To validate the fidelity of synthetic tumors, we engaged 13 board-certified radiologists in a Visual Turing Test to discern between synthetic and real tumors. Rigorous clinician evaluation validates the high quality of our synthetic tumors, as they achieved only 51.1% sensitivity and 60.8% accuracy in distinguishing our synthetic tumors from real ones. Through high-quality tumor synthesis, FreeTumor scales up the recognition training datasets by over 40 times, showcasing a notable superiority over state-of-the-art AI methods including various synthesis methods and foundation models. These findings indicate promising prospects of FreeTumor in clinical applications, potentially advancing tumor treatments and improving the survival rates of patients.
Abstract:Artificial intelligence-assisted imaging analysis has made substantial strides in tumor diagnosis and management. Here we present PASTA, a pan-tumor CT foundation model that achieves state-of-the-art performance on 45 of 46 representative oncology tasks -- including lesion segmentation, tumor detection in plain CT, tumor staging, survival prediction, structured report generation, and cross-modality transfer learning, significantly outperforming the second-best models on 35 tasks. This remarkable advancement is driven by our development of PASTA-Gen, an innovative synthetic tumor generation framework that produces a comprehensive dataset of 30,000 CT scans with pixel-level annotated lesions and paired structured reports, encompassing malignancies across ten organs and five benign lesion types. By leveraging this rich, high-quality synthetic data, we overcome a longstanding bottleneck in the development of CT foundation models -- specifically, the scarcity of publicly available, high-quality annotated datasets due to privacy constraints and the substantial labor required for scaling precise data annotation. Encouragingly, PASTA demonstrates exceptional data efficiency with promising practical value, markedly improving performance on various tasks with only a small amount of real-world data. The open release of both the synthetic dataset and PASTA foundation model effectively addresses the challenge of data scarcity, thereby advancing oncological research and clinical translation.
Abstract:The increasing adoption of AI-generated radiology reports necessitates robust methods for detecting hallucinations--false or unfounded statements that could impact patient care. We present ReXTrust, a novel framework for fine-grained hallucination detection in AI-generated radiology reports. Our approach leverages sequences of hidden states from large vision-language models to produce finding-level hallucination risk scores. We evaluate ReXTrust on a subset of the MIMIC-CXR dataset and demonstrate superior performance compared to existing approaches, achieving an AUROC of 0.8751 across all findings and 0.8963 on clinically significant findings. Our results show that white-box approaches leveraging model hidden states can provide reliable hallucination detection for medical AI systems, potentially improving the safety and reliability of automated radiology reporting.
Abstract:We present a comprehensive evaluation of a2z-1, an artificial intelligence (AI) model designed to analyze abdomen-pelvis CT scans for 21 time-sensitive and actionable findings. Our study focuses on rigorous assessment of the model's performance and generalizability. Large-scale retrospective analysis demonstrates an average AUC of 0.931 across 21 conditions. External validation across two distinct health systems confirms consistent performance (AUC 0.923), establishing generalizability to different evaluation scenarios, with notable performance in critical findings such as small bowel obstruction (AUC 0.958) and acute pancreatitis (AUC 0.961). Subgroup analysis shows consistent accuracy across patient sex, age groups, and varied imaging protocols, including different slice thicknesses and contrast administration types. Comparison of high-confidence model outputs to radiologist reports reveals instances where a2z-1 identified overlooked findings, suggesting potential for quality assurance applications.
Abstract:Radiologists face increasing workload pressures amid growing imaging volumes, creating risks of burnout and delayed reporting times. While artificial intelligence (AI) based automated radiology report generation shows promise for reporting workflow optimization, evidence of its real-world impact on clinical accuracy and efficiency remains limited. This study evaluated the effect of draft reports on radiology reporting workflows by conducting a three reader multi-case study comparing standard versus AI-assisted reporting workflows. In both workflows, radiologists reviewed the cases and modified either a standard template (standard workflow) or an AI-generated draft report (AI-assisted workflow) to create the final report. For controlled evaluation, we used GPT-4 to generate simulated AI drafts and deliberately introduced 1-3 errors in half the cases to mimic real AI system performance. The AI-assisted workflow significantly reduced average reporting time from 573 to 435 seconds (p=0.003), without a statistically significant difference in clinically significant errors between workflows. These findings suggest that AI-generated drafts can meaningfully accelerate radiology reporting while maintaining diagnostic accuracy, offering a practical solution to address mounting workload challenges in clinical practice.
Abstract:In medical reporting, the accuracy of radiological reports, whether generated by humans or machine learning algorithms, is critical. We tackle a new task in this paper: image-conditioned autocorrection of inaccuracies within these reports. Using the MIMIC-CXR dataset, we first intentionally introduce a diverse range of errors into reports. Subsequently, we propose a two-stage framework capable of pinpointing these errors and then making corrections, simulating an \textit{autocorrection} process. This method aims to address the shortcomings of existing automated medical reporting systems, like factual errors and incorrect conclusions, enhancing report reliability in vital healthcare applications. Importantly, our approach could serve as a guardrail, ensuring the accuracy and trustworthiness of automated report generation. Experiments on established datasets and state of the art report generation models validate this method's potential in correcting medical reporting errors.
Abstract:Medical vision-language model models often struggle with generating accurate quantitative measurements in radiology reports, leading to hallucinations that undermine clinical reliability. We introduce FactCheXcker, a modular framework that de-hallucinates radiology report measurements by leveraging an improved query-code-update paradigm. Specifically, FactCheXcker employs specialized modules and the code generation capabilities of large language models to solve measurement queries generated based on the original report. After extracting measurable findings, the results are incorporated into an updated report. We evaluate FactCheXcker on endotracheal tube placement, which accounts for an average of 78% of report measurements, using the MIMIC-CXR dataset and 11 medical report-generation models. Our results show that FactCheXcker significantly reduces hallucinations, improves measurement precision, and maintains the quality of the original reports. Specifically, FactCheXcker improves the performance of all 11 models and achieves an average improvement of 94.0% in reducing measurement hallucinations measured by mean absolute error.
Abstract:AI-driven models have demonstrated significant potential in automating radiology report generation for chest X-rays. However, there is no standardized benchmark for objectively evaluating their performance. To address this, we present ReXrank, https://rexrank.ai, a public leaderboard and challenge for assessing AI-powered radiology report generation. Our framework incorporates ReXGradient, the largest test dataset consisting of 10,000 studies, and three public datasets (MIMIC-CXR, IU-Xray, CheXpert Plus) for report generation assessment. ReXrank employs 8 evaluation metrics and separately assesses models capable of generating only findings sections and those providing both findings and impressions sections. By providing this standardized evaluation framework, ReXrank enables meaningful comparisons of model performance and offers crucial insights into their robustness across diverse clinical settings. Beyond its current focus on chest X-rays, ReXrank's framework sets the stage for comprehensive evaluation of automated reporting across the full spectrum of medical imaging.
Abstract:Generating accurate radiology reports from medical images is a clinically important but challenging task. While current Vision Language Models (VLMs) show promise, they are prone to generating hallucinations, potentially compromising patient care. We introduce RadFlag, a black-box method to enhance the accuracy of radiology report generation. Our method uses a sampling-based flagging technique to find hallucinatory generations that should be removed. We first sample multiple reports at varying temperatures and then use a Large Language Model (LLM) to identify claims that are not consistently supported across samples, indicating that the model has low confidence in those claims. Using a calibrated threshold, we flag a fraction of these claims as likely hallucinations, which should undergo extra review or be automatically rejected. Our method achieves high precision when identifying both individual hallucinatory sentences and reports that contain hallucinations. As an easy-to-use, black-box system that only requires access to a model's temperature parameter, RadFlag is compatible with a wide range of radiology report generation models and has the potential to broadly improve the quality of automated radiology reporting.
Abstract:The integration of Large Language Models (LLMs) into medical applications has sparked widespread interest across the healthcare industry, from drug discovery and development to clinical decision support, assisting telemedicine, medical devices, and healthcare insurance applications. This perspective paper aims to discuss the inner workings of building LLM-powered medical AI applications and introduces a comprehensive framework for their development. We review existing literature and outline the unique challenges of applying LLMs in specialized medical contexts. Additionally, we introduce a three-step framework to organize medical LLM research activities: 1) Modeling: breaking down complex medical workflows into manageable steps for developing medical-specific models; 2) Optimization: optimizing the model performance with crafted prompts and integrating external knowledge and tools, and 3) System engineering: decomposing complex tasks into subtasks and leveraging human expertise for building medical AI applications. Furthermore, we offer a detailed use case playbook that describes various LLM-powered medical AI applications, such as optimizing clinical trial design, enhancing clinical decision support, and advancing medical imaging analysis. Finally, we discuss various challenges and considerations for building medical AI applications with LLMs, such as handling hallucination issues, data ownership and compliance, privacy, intellectual property considerations, compute cost, sustainability issues, and responsible AI requirements.