University of Oregon
Abstract:Large vision-language models (LVLMs) have achieved remarkable performance across diverse multimodal tasks, yet they continue to suffer from hallucinations, generating content that is inconsistent with the visual input. Prior work DHCP (Detecting Hallucinations by Cross-modal Attention Pattern) has explored hallucination detection from the perspective of cross-modal attention, but does not address hallucination mitigation. In this paper, we propose MHSA (Mitigating Hallucinations via Steered Attention), a lightweight framework that mitigates hallucinations by learning to correct cross-modal attention patterns in LVLMs. MHSA trains a simple three-layer MLP generator to produce corrected attention, guided by supervisory signals from the DHCP discriminator and the LVLM itself. During inference, MHSA mitigates both discriminative and generative hallucinations across various datasets and LVLMs by simply replacing the original cross-modal attention with the corrected one, without modifying any LVLM parameters. By extending cross-modal attention mechanisms from hallucination detection to hallucination mitigation, MHSA offers a novel perspective on hallucination research in LVLMs and helps enhance their reliability.
Abstract:Category-agnostic pose estimation (CAPE) aims to localize keypoints on query images from arbitrary categories, using only a few annotated support examples for guidance. Recent approaches either treat keypoints as isolated entities or rely on manually defined skeleton priors, which are costly to annotate and inherently inflexible across diverse categories. Such oversimplification limits the model's capacity to capture instance-wise structural cues critical for accurate pixel-level localization. To overcome these limitations, we propose GenCape, a Generative-based framework for CAPE that infers keypoint relationships solely from image-based support inputs, without additional textual descriptions or predefined skeletons. Our framework consists of two principal components: an iterative Structure-aware Variational Autoencoder (i-SVAE) and a Compositional Graph Transfer (CGT) module. The former infers soft, instance-specific adjacency matrices from support features through variational inference, embedded layer-wise into the Graph Transformer Decoder for progressive structural priors refinement. The latter adaptively aggregates multiple latent graphs into a query-aware structure via Bayesian fusion and attention-based reweighting, enhancing resilience to visual uncertainty and support-induced bias. This structure-aware design facilitates effective message propagation among keypoints and promotes semantic alignment across object categories with diverse keypoint topologies. Experimental results on the MP-100 dataset show that our method achieves substantial gains over graph-support baselines under both 1- and 5-shot settings, while maintaining competitive performance against text-support counterparts.
Abstract:Few-shot action recognition (FSAR) requires models to generalize to novel action categories from only a handful of annotated samples. Despite progress with vision-language models, existing approaches still suffer from semantic-temporal misalignment, where static textual prompts fail to capture decisive visual cues that appear sparsely across sequences, and from inadequate modeling of multi-scale temporal dynamics, as short-term discriminative cues and long-range dependencies are often either oversmoothed or fragmented. To address these challenges, we propose Semantic Temporal Adaptive Representation Learning (STAR), a unified framework, consisting of a semantic-alignment component and a temporal-aware component, effectively bridging the semantic and temporal gaps and transferring the sequence modeling capability of Mamba into the FSAR. The semantic alignment module introduces a Temporal Semantic Attention (TSA) mechanism, which performs frame-level cross-modal alignment with textual cues, ensuring fine-grained semantic-temporal consistency. The temporal-aware module incorporates a Semantic Temporal Prototype Refiner (STPR) that integrates semantic-guided Mamba blocks with multi-frequency temporal sampling and bidirectional state-space refinement, yielding semantically aligned prototypes with enhanced discriminative fidelity and temporal consistency. Furthermore, temporally dependent class descriptors derived from large language models (LLMs) provide long-range semantic guidance. Extensive experiments on five FSAR benchmarks demonstrate the consistent superiority of STAR over state-of-the-art methods. For instance, STAR achieves up to 8.1% and 6.7% gains on the SSv2-Full and SSv2-Small datasets under the 1-shot setting, and 7.3% on HMDB51, validating its effectiveness under limited supervision. The code is available at https://github.com/HongliLiu1/STAR-main.
Abstract:Inferring spatially resolved gene expression from histology images offers a cost-effective complement to spatial transcriptomics (ST). However, existing methods reduce this task to a simple morphology-to-expression mapping, where visual similarity does not guarantee molecular consistency. Meanwhile, single-cell data has amassed rich resources far surpassing the scale of ST data, yet it remains underexplored in vision-omics modeling. Furthermore, current approaches commit to a monolithic paradigm with bottlenecks, unable to balance expressive flexibility with biological fidelity. To bridge these gaps, we propose DUET, a novel dual-paradigm framework that synergizes parametric prediction and memory-based retrieval under cellular inductive priors. DUET implements a parallel regression-retrieval paradigm, adaptively reconciling the outputs of its complementary pathways. To mitigate aleatoric vision ambiguity, we incorporate large-scale single-cell references to impose molecular states as biological constraints for faithful learning. Building upon structural refinement, we further design a lightweight adapter to dynamically assign branch preference across spatial contexts to achieve optimal performance. Extensive experiments on three public datasets across varied gene scales demonstrate that DUET achieves SOTA performance, with consistent gains contributed by each proposed component. Code is available at https://github.com/Junchao-Zhu/DUET
Abstract:Reinforcement learning from verifiable rewards (RLVR) has improved the reasoning abilities of large language models (LLMs), but most existing approaches rely on sparse outcome-level feedback. This sparsity creates a credit assignment challenge in long-horizon agentic reasoning: a trajectory may fail despite containing many correct intermediate decisions, or succeed despite containing flawed ones. In this work, we study a class of densely-verifiable agentic reasoning problems, where intermediate actions can be objectively checked by symbolic or algorithmic oracles. We propose Verifiable Process Rewards (VPR), a framework that converts such oracles into dense turn-level supervision for reinforcement learning, and instantiate it in three representative settings: search-based verification for dynamic deduction, constraint-based verification for logical reasoning, and posterior-based verification for probabilistic inference. We further provide a theoretical analysis showing that dense verifier-grounded rewards can improve long-horizon credit assignment by providing more localized learning signals, with the benefit depending on the reliability of the verifier. Empirically, VPR outperforms outcome-level reward and rollout-based process reward baselines across controlled environments, and more importantly, transfers to both general and agentic reasoning benchmarks, suggesting that verifiable process supervision can foster general reasoning skills applicable beyond the training environments. Our results indicate that VPR is a promising approach for enhancing LLM agents whenever reliable intermediate verification is available, while also highlighting its dependence on oracle quality and the open challenge of extending VPR to less structured, open-ended environments.
Abstract:Clinical reports are often fragmented across healthcare institutions because privacy regulations and data silos limit direct information sharing. When patients seek care at a different hospital, they often carry paper or scanned reports from prior visits. This hinders EHR integration and longitudinal review, and downstream applications that depend on more complete patient records, such as patient management, follow-up care, real-world studies, and clinical-trial matching. Although OCR can digitize such reports, reliable extraction remains challenging because clinical documents are heterogeneous, OCR text is noisy, and many healthcare settings require low-cost on-premise deployment. We formulate this problem as canonical key-conditioned extractive question answering over OCR-derived clinical reports. Because the key fields are neither fixed nor known in advance, the key space is open. We maintain a canonical key inventory through iterative key mining, normalization, clustering, and lightweight human verification, and introduce key coverage as a metric to quantify inventory completeness. Using a 0.2B BERT-based model, experiments on real-world reports from more than 20 hospitals show performance improves monotonically with key coverage. The model achieves F1 scores of 0.839 and 0.893 under exact match and boundary-tolerant matching, respectively, once the Top-90 canonical keys are covered. These results show that key coverage is a dominant factor for end-to-end performance. At Top-90 coverage, our model outperforms a fine-tuned Qwen3-0.6B baseline under exact match. Although our annotated corpus is Chinese, the method relies on the language-agnostic key-value organization of semi-structured clinical reports and can be adapted to other settings given an appropriate canonical key inventory and alias mapping.
Abstract:Self-supervised pretraining has become the mainstream approach for learning MRI representations from unlabeled scans. However, most existing objectives still treat each scan primarily as static aggregations of slices, patches or volumes. We ask whether there exists an intrinsic form of self-supervision signal that is different from reconstructing the masked patches, through transforming the 3D volumes into controllable 2D rendered sequences: by rendering slices at continuous positions, orientations, and scales, a 3D volume can be converted into dense video-action sequences whose controls are the action trajectories. We study this formulation with an action-conditioned pretraining objective, where a tokenizer encodes slice observations and a latent dynamics model predicts the evolution of latent features. Across representative anatomical and spatial downstream tasks, the proposed pretraining is evaluated against standard static-volume baselines, tokenizer-only pretraining, and dynamics variants without aligned actions. These results suggest that controllable MRI slice navigation provides a useful complementary pretraining interface for learning anatomical and spatial representations from large unlabeled MRI collections.
Abstract:Stochastic differential equations (SDEs) provide a flexible framework for modeling temporal dynamics in partially observed systems. A central task is to calibrate such models from data, which requires inferring latent trajectories and parameters from sparse, noisy observations. Classical smoothing methods for this problem are often limited by path degeneracy and poor scalability. In this work, we developed a novel method based on characterization of the posterior SDE in terms of conditional backward-in-time score defined as the gradient of a function solving a Kolmogorov backward equation with multiplicative updates at observation times. We learn this conditional score using neural networks trained to satisfy both the governing PDE and the observation-induced jump conditions, thereby integrating continuous-time dynamics with discrete Bayesian updates. The resulting score induces a posterior SDE with the same diffusion coefficient but a modified drift, enabling efficient posterior trajectory sampling. We further derive a likelihood-based objective for learning the SDE parameters, yielding an evidence lower bound (ELBO) for joint state smoothing and parameter estimation. This leads to a variational EM-style procedure, where the neural conditional score is optimized to approximate the smoothing distribution, followed by a maximization step over the SDE parameters using samples from the induced posterior. Experiments on nonlinear systems demonstrate accurate and stable inference with a very few observations demonstrating significant improved scalability compared to classical MCMC methods.
Abstract:Pest-induced crop losses pose a major threat to global food security and sustainable agricultural development. While recent advances in Multimodal Large Language Models (MLLMs) have shown strong potential for visual understanding and smart agriculture, their direct application to pest recognition remains limited due to the domain's unique challenges such as high inter-species complexity, intra-species variability, and the scarcity of expert-annotated data. In this work, we introduce Pest-Thinker, a knowledge-driven reinforcement learning (RL) framework that enables MLLMs to reason over fine-grained pest morphology. We first construct two high-definition pest benchmarks, QFSD and AgriInsect, comprising diverse species and expert-annotated morphological traits. Leveraging these datasets, we synthesize Chain-of-Thought (CoT) reasoning trajectories to facilitate structured learning of pest-specific visual cues through Supervised Fine-Tuning (SFT). Subsequently, we employ Group Relative Policy Optimization (GRPO) with a novel feature reward that guides the model to focus on observable morphological evidence, assessed by an LLM-as-a-Judge strategy. Extensive experiments demonstrate that Pest-Thinker substantially improves both in-domain and out-of-domain morphological understanding, marking a step toward expert-level visual reasoning for intelligent agricultural pest analysis. The datasets and source code are available upon acceptance.
Abstract:Semi-structured information extraction (IE) from OCR-derived clinical reports is crucial for efficiently reconstructing patients' longitudinal medical histories. In practice, this scenario commonly involves three tasks: (i) field-header (key) discovery, (ii) key-conditioned question answering (QA), and (iii) end-to-end key-value pair extraction. However, existing evaluations often under-model two factors: heterogeneous and incompletely known key representations, and OCR-induced noise. This makes it difficult to assess model robustness in real-world settings. We present MedStruct-S, a benchmark specifically designed to evaluate these tasks under unknown keys and OCR noise. MedStruct-S contains 3,582 annotated real-world clinical report pages. Using MedStruct-S, we benchmark two representative paradigms: encoder-only sequence labeling with post-processing and decoder-only structured generation, covering four encoder-only and five decoder-only models spanning 0.11B to 103B parameters. Our results show that encoder-only models achieve the best performance for non-null-value key-conditioned QA despite being substantially smaller than decoder-only models. When comparing models of similar order of magnitude, encoder-only models still perform better overall. Without controlling for model scale, fine-tuned decoder-only models deliver the strongest overall results. These findings show that the benchmark provides a reliable and practical basis for selecting and comparing models across different semi-structured IE settings.