Unseen Horizons: Unveiling the Real Capability of LLM Code Generation Beyond the Familiar

Recently, large language models (LLMs) have shown strong potential in code generation tasks. However, there are still gaps before they can be fully applied in actual software development processes. Accurately assessing the code generation capabilities of large language models has become an important basis for evaluating and improving the models. Some existing works have constructed datasets to evaluate the capabilities of these models. However, the current evaluation process may encounter the illusion of "Specialist in Familiarity", primarily due to three gaps: the exposure of target code, case timeliness, and dependency availability. The fundamental reason for these gaps is that the code in current datasets may have been extensively exposed and exercised during the training phase, and due to the continuous training and development of LLM, their timeliness has been severely compromised. The key to solve the problem is to, as much as possible, evaluate the LLMs using code that they have not encountered before. Thus, the fundamental idea in this paper is to draw on the concept of code obfuscation, changing code at different levels while ensuring the functionality and output. To this end, we build a code-obfuscation based benchmark OBFUSEVAL. We first collect 1,354 raw cases from five real-world projects, including function description and code. Then we use three-level strategy (symbol, structure and semantic) to obfuscate descriptions, code and context dependencies. We evaluate four LLMs on OBFU- SEVAL and compared the effectiveness of different obfuscation strategy. We use official test suites of these projects to evaluate the generated code. The results show that after obfuscation, the average decrease ratio of test pass rate can up to 62.5%.

TSINR: Capturing Temporal Continuity via Implicit Neural Representations for Time Series Anomaly Detection

Time series anomaly detection aims to identify unusual patterns in data or deviations from systems' expected behavior. The reconstruction-based methods are the mainstream in this task, which learn point-wise representation via unsupervised learning. However, the unlabeled anomaly points in training data may cause these reconstruction-based methods to learn and reconstruct anomalous data, resulting in the challenge of capturing normal patterns. In this paper, we propose a time series anomaly detection method based on implicit neural representation (INR) reconstruction, named TSINR, to address this challenge. Due to the property of spectral bias, TSINR enables prioritizing low-frequency signals and exhibiting poorer performance on high-frequency abnormal data. Specifically, we adopt INR to parameterize time series data as a continuous function and employ a transformer-based architecture to predict the INR of given data. As a result, the proposed TSINR method achieves the advantage of capturing the temporal continuity and thus is more sensitive to discontinuous anomaly data. In addition, we further design a novel form of INR continuous function to learn inter- and intra-channel information, and leverage a pre-trained large language model to amplify the intense fluctuations in anomalies. Extensive experiments demonstrate that TSINR achieves superior overall performance on both univariate and multivariate time series anomaly detection benchmarks compared to other state-of-the-art reconstruction-based methods. Our codes are available.

KA$^2$ER: Knowledge Adaptive Amalgamation of ExpeRts for Medical Images Segmentation

Recently, many foundation models for medical image analysis such as MedSAM, SwinUNETR have been released and proven to be useful in multiple tasks. However, considering the inherent heterogeneity and inhomogeneity of real-world medical data, directly applying these models to specific medical image segmentation tasks often leads to negative domain shift effects, which can severely weaken the model's segmentation capabilities. To this end, we propose an adaptive amalgamation knowledge framework that aims to train a versatile foundation model to handle the joint goals of multiple expert models, each specialized for a distinct task. Specifically, we first train an nnUNet-based expert model for each task, and reuse the pre-trained SwinUNTER as the target foundation model. Then, the input data for all challenging tasks are encoded in the foundation model and the expert models, respectively, and their backbone features are jointly projected into the adaptive amalgamation layer. Within the hidden layer, the hierarchical attention mechanisms are designed to achieve adaptive merging of the target model to the hidden layer feature knowledge of all experts, which significantly reduces the domain shift arising from the inter-task differences. Finally, the gold amalgamated features and the prompt features are fed into the mask decoder to obtain the segmentation results. Extensive experiments conducted in these challenging tasks demonstrate the effectiveness and adaptability of our foundation model for real-world medical image segmentation.

NeuroClips: Towards High-fidelity and Smooth fMRI-to-Video Reconstruction

Reconstruction of static visual stimuli from non-invasion brain activity fMRI achieves great success, owning to advanced deep learning models such as CLIP and Stable Diffusion. However, the research on fMRI-to-video reconstruction remains limited since decoding the spatiotemporal perception of continuous visual experiences is formidably challenging. We contend that the key to addressing these challenges lies in accurately decoding both high-level semantics and low-level perception flows, as perceived by the brain in response to video stimuli. To the end, we propose NeuroClips, an innovative framework to decode high-fidelity and smooth video from fMRI. NeuroClips utilizes a semantics reconstructor to reconstruct video keyframes, guiding semantic accuracy and consistency, and employs a perception reconstructor to capture low-level perceptual details, ensuring video smoothness. During inference, it adopts a pre-trained T2V diffusion model injected with both keyframes and low-level perception flows for video reconstruction. Evaluated on a publicly available fMRI-video dataset, NeuroClips achieves smooth high-fidelity video reconstruction of up to 6s at 8FPS, gaining significant improvements over state-of-the-art models in various metrics, e.g., a 128% improvement in SSIM and an 81% improvement in spatiotemporal metrics. Our project is available at https://github.com/gongzix/NeuroClips.

Summit Vitals: Multi-Camera and Multi-Signal Biosensing at High Altitudes

Video photoplethysmography (vPPG) is an emerging method for non-invasive and convenient measurement of physiological signals, utilizing two primary approaches: remote video PPG (rPPG) and contact video PPG (cPPG). Monitoring vitals in high-altitude environments, where heart rates tend to increase and blood oxygen levels often decrease, presents significant challenges. To address these issues, we introduce the SUMS dataset comprising 80 synchronized non-contact facial and contact finger videos from 10 subjects during exercise and oxygen recovery scenarios, capturing PPG, respiration rate (RR), and SpO2. This dataset is designed to validate video vitals estimation algorithms and compare facial rPPG with finger cPPG. Additionally, fusing videos from different positions (i.e., face and finger) reduces the mean absolute error (MAE) of SpO2 predictions by 7.6\% and 10.6\% compared to only face and only finger, respectively. In cross-subject evaluation, we achieve an MAE of less than 0.5 BPM for HR estimation and 2.5\% for SpO2 estimation, demonstrating the precision of our multi-camera fusion techniques. Our findings suggest that simultaneous training on multiple indicators, such as PPG and blood oxygen, can reduce MAE in SpO2 estimation by 17.8\%.

Attention Beats Linear for Fast Implicit Neural Representation Generation

Implicit Neural Representation (INR) has gained increasing popularity as a data representation method, serving as a prerequisite for innovative generation models. Unlike gradient-based methods, which exhibit lower efficiency in inference, the adoption of hyper-network for generating parameters in Multi-Layer Perceptrons (MLP), responsible for executing INR functions, has surfaced as a promising and efficient alternative. However, as a global continuous function, MLP is challenging in modeling highly discontinuous signals, resulting in slow convergence during the training phase and inaccurate reconstruction performance. Moreover, MLP requires massive representation parameters, which implies inefficiencies in data representation. In this paper, we propose a novel Attention-based Localized INR (ANR) composed of a localized attention layer (LAL) and a global MLP that integrates coordinate features with data features and converts them to meaningful outputs. Subsequently, we design an instance representation framework that delivers a transformer-like hyper-network to represent data instances as a compact representation vector. With instance-specific representation vector and instance-agnostic ANR parameters, the target signals are well reconstructed as a continuous function. We further address aliasing artifacts with variational coordinates when obtaining the super-resolution inference results. Extensive experimentation across four datasets showcases the notable efficacy of our ANR method, e.g. enhancing the PSNR value from 37.95dB to 47.25dB on the CelebA dataset. Code is released at https://github.com/Roninton/ANR.

Floating Anchor Diffusion Model for Multi-motif Scaffolding

Motif scaffolding seeks to design scaffold structures for constructing proteins with functions derived from the desired motif, which is crucial for the design of vaccines and enzymes. Previous works approach the problem by inpainting or conditional generation. Both of them can only scaffold motifs with fixed positions, and the conditional generation cannot guarantee the presence of motifs. However, prior knowledge of the relative motif positions in a protein is not readily available, and constructing a protein with multiple functions in one protein is more general and significant because of the synergies between functions. We propose a Floating Anchor Diffusion (FADiff) model. FADiff allows motifs to float rigidly and independently in the process of diffusion, which guarantees the presence of motifs and automates the motif position design. Our experiments demonstrate the efficacy of FADiff with high success rates and designable novel scaffolds. To the best of our knowledge, FADiff is the first work to tackle the challenge of scaffolding multiple motifs without relying on the expertise of relative motif positions in the protein. Code is available at https://github.com/aim-uofa/FADiff.

MLIP: Efficient Multi-Perspective Language-Image Pretraining with Exhaustive Data Utilization

Contrastive Language-Image Pretraining (CLIP) has achieved remarkable success, leading to rapid advancements in multimodal studies. However, CLIP faces a notable challenge in terms of inefficient data utilization. It relies on a single contrastive supervision for each image-text pair during representation learning, disregarding a substantial amount of valuable information that could offer richer supervision. Additionally, the retention of non-informative tokens leads to increased computational demands and time costs, particularly in CLIP's ViT image encoder. To address these issues, we propose Multi-Perspective Language-Image Pretraining (MLIP). In MLIP, we leverage the frequency transform's sensitivity to both high and low-frequency variations, which complements the spatial domain's sensitivity limited to low-frequency variations only. By incorporating frequency transforms and token-level alignment, we expand CILP's single supervision into multi-domain and multi-level supervision, enabling a more thorough exploration of informative image features. Additionally, we introduce a token merging method guided by comprehensive semantics from the frequency and spatial domains. This allows us to merge tokens to multi-granularity tokens with a controllable compression rate to accelerate CLIP. Extensive experiments validate the effectiveness of our design.

Excess Delay from GDP: Measurement and Causal Analysis

Ground Delay Programs (GDPs) have been widely used to resolve excessive demand-capacity imbalances at arrival airports by shifting foreseen airborne delay to pre-departure ground delay. While offering clear safety and efficiency benefits, GDPs may also create additional delay because of imperfect execution and uncertainty in predicting arrival airport capacity. This paper presents a methodology for measuring excess delay resulting from individual GDPs and investigates factors that influence excess delay using regularized regression models. We measured excess delay for 1210 GDPs from 33 U.S. airports in 2019. On a per-restricted flight basis, the mean excess delay is 35.4 min with std of 20.6 min. In our regression analysis of the variation in excess delay, ridge regression is found to perform best. The factors affecting excess delay include time variations during gate out and taxi out for flights subject to the GDP, program rate setting and revisions, and GDP time duration.

Real-Time Go-Around Prediction: A case study of JFK airport

In this paper, we employ the long-short-term memory model (LSTM) to predict the real-time go-around probability as an arrival flight is approaching JFK airport and within 10 nm of the landing runway threshold. We further develop methods to examine the causes to go-around occurrences both from a global view and an individual flight perspective. According to our results, in-trail spacing, and simultaneous runway operation appear to be the top factors that contribute to overall go-around occurrences. We then integrate these pre-trained models and analyses with real-time data streaming, and finally develop a demo web-based user interface that integrates the different components designed previously into a real-time tool that can eventually be used by flight crews and other line personnel to identify situations in which there is a high risk of a go-around.