Enhancing LLM Generation with Knowledge Hypergraph for Evidence-Based Medicine

Evidence-based medicine (EBM) plays a crucial role in the application of large language models (LLMs) in healthcare, as it provides reliable support for medical decision-making processes. Although it benefits from current retrieval-augmented generation~(RAG) technologies, it still faces two significant challenges: the collection of dispersed evidence and the efficient organization of this evidence to support the complex queries necessary for EBM. To tackle these issues, we propose using LLMs to gather scattered evidence from multiple sources and present a knowledge hypergraph-based evidence management model to integrate these evidence while capturing intricate relationships. Furthermore, to better support complex queries, we have developed an Importance-Driven Evidence Prioritization (IDEP) algorithm that utilizes the LLM to generate multiple evidence features, each with an associated importance score, which are then used to rank the evidence and produce the final retrieval results. Experimental results from six datasets demonstrate that our approach outperforms existing RAG techniques in application domains of interest to EBM, such as medical quizzing, hallucination detection, and decision support. Testsets and the constructed knowledge graph can be accessed at \href{https://drive.google.com/file/d/1WJ9QTokK3MdkjEmwuFQxwH96j_Byawj_/view?usp=drive_link}{https://drive.google.com/rag4ebm}.

RoMA: Scaling up Mamba-based Foundation Models for Remote Sensing

Recent advances in self-supervised learning for Vision Transformers (ViTs) have fueled breakthroughs in remote sensing (RS) foundation models. However, the quadratic complexity of self-attention poses a significant barrier to scalability, particularly for large models and high-resolution images. While the linear-complexity Mamba architecture offers a promising alternative, existing RS applications of Mamba remain limited to supervised tasks on small, domain-specific datasets. To address these challenges, we propose RoMA, a framework that enables scalable self-supervised pretraining of Mamba-based RS foundation models using large-scale, diverse, unlabeled data. RoMA enhances scalability for high-resolution images through a tailored auto-regressive learning strategy, incorporating two key innovations: 1) a rotation-aware pretraining mechanism combining adaptive cropping with angular embeddings to handle sparsely distributed objects with arbitrary orientations, and 2) multi-scale token prediction objectives that address the extreme variations in object scales inherent to RS imagery. Systematic empirical studies validate that Mamba adheres to RS data and parameter scaling laws, with performance scaling reliably as model and data size increase. Furthermore, experiments across scene classification, object detection, and semantic segmentation tasks demonstrate that RoMA-pretrained Mamba models consistently outperform ViT-based counterparts in both accuracy and computational efficiency. The source code and pretrained models will be released at https://github.com/MiliLab/RoMA.

A Survey on Sparse Autoencoders: Interpreting the Internal Mechanisms of Large Language Models

Large Language Models (LLMs) have revolutionized natural language processing, yet their internal mechanisms remain largely opaque. Recently, mechanistic interpretability has attracted significant attention from the research community as a means to understand the inner workings of LLMs. Among various mechanistic interpretability approaches, Sparse Autoencoders (SAEs) have emerged as a particularly promising method due to their ability to disentangle the complex, superimposed features within LLMs into more interpretable components. This paper presents a comprehensive examination of SAEs as a promising approach to interpreting and understanding LLMs. We provide a systematic overview of SAE principles, architectures, and applications specifically tailored for LLM analysis, covering theoretical foundations, implementation strategies, and recent developments in sparsity mechanisms. We also explore how SAEs can be leveraged to explain the internal workings of LLMs, steer model behaviors in desired directions, and develop more transparent training methodologies for future models. Despite the challenges that remain around SAE implementation and scaling, they continue to provide valuable tools for understanding the internal mechanisms of large language models.

SAIF: A Sparse Autoencoder Framework for Interpreting and Steering Instruction Following of Language Models

The ability of large language models (LLMs) to follow instructions is crucial for their practical applications, yet the underlying mechanisms remain poorly understood. This paper presents a novel framework that leverages sparse autoencoders (SAE) to interpret how instruction following works in these models. We demonstrate how the features we identify can effectively steer model outputs to align with given instructions. Through analysis of SAE latent activations, we identify specific latents responsible for instruction following behavior. Our findings reveal that instruction following capabilities are encoded by a distinct set of instruction-relevant SAE latents. These latents both show semantic proximity to relevant instructions and demonstrate causal effects on model behavior. Our research highlights several crucial factors for achieving effective steering performance: precise feature identification, the role of final layer, and optimal instruction positioning. Additionally, we demonstrate that our methodology scales effectively across SAEs and LLMs of varying sizes.

Large Vision-Language Model Alignment and Misalignment: A Survey Through the Lens of Explainability

Large Vision-Language Models (LVLMs) have demonstrated remarkable capabilities in processing both visual and textual information. However, the critical challenge of alignment between visual and linguistic representations is not fully understood. This survey presents a comprehensive examination of alignment and misalignment in LVLMs through an explainability lens. We first examine the fundamentals of alignment, exploring its representational and behavioral aspects, training methodologies, and theoretical foundations. We then analyze misalignment phenomena across three semantic levels: object, attribute, and relational misalignment. Our investigation reveals that misalignment emerges from challenges at multiple levels: the data level, the model level, and the inference level. We provide a comprehensive review of existing mitigation strategies, categorizing them into parameter-frozen and parameter-tuning approaches. Finally, we outline promising future research directions, emphasizing the need for standardized evaluation protocols and in-depth explainability studies.

MALoRA: Mixture of Asymmetric Low-Rank Adaptation for Enhanced Multi-Task Learning

Parameter-Efficient Fine-Tuning (PEFT) methods like LoRA have significantly improved the adaptation of LLMs to downstream tasks in a resource-efficient manner. However, in multi-task scenarios, challenges such as training imbalance and the seesaw effect frequently emerge. Mixture-of-LoRA (MoLoRA), which combines LoRA with sparse Mixture-of-Experts, mitigates some of these issues by promoting task-specific learning across experts. Despite this, MoLoRA remains inefficient in terms of training speed, parameter utilization, and overall multi-task performance. In this paper, we propose Mixture of Asymmetric Low-Rank Adaptaion (MALoRA), a flexible fine-tuning framework that leverages asymmetric optimization across LoRA experts. MALoRA reduces the number of trainable parameters by 30% to 48%, increases training speed by 1.2x, and matches the computational efficiency of single-task LoRA models. Additionally, MALoRA addresses overfitting issues commonly seen in high-rank configurations, enhancing performance stability. Extensive experiments across diverse multi-task learning scenarios demonstrate that MALoRA consistently outperforms all baseline methods in both inter-domain and intra-domain tasks.

Exploring LLM-based Data Annotation Strategies for Medical Dialogue Preference Alignment

This research examines the use of Reinforcement Learning from AI Feedback (RLAIF) techniques to improve healthcare dialogue models, with the aim of tackling the challenges of preference-aligned data annotation while reducing the reliance on medical experts. We argue that the primary challenges in current RLAIF research for healthcare are the limitations of automated evaluation methods and the difficulties in accurately representing physician preferences. To address these challenges, we present a new evaluation framework based on standardized patient examinations. This framework is designed to objectively assess the effectiveness of large language models (LLMs) in guiding users and following instructions, enabling a comprehensive comparison across different models. Furthermore, our investigation of effective ways to express physician preferences using Constitutional AI algorithms highlighted the particular effectiveness of flowcharts. Utilizing this finding, we introduce an innovative agent-based approach for annotating preference data. This approach autonomously creates medical dialogue flows tailored to the patient's condition, demonstrates strong generalization abilities, and reduces the need for expert involvement. Our results show that the agent-based approach outperforms existing RLAIF annotation methods in standardized patient examinations and surpasses current open source medical dialogue LLMs in various test scenarios.

Exploring Multilingual Probing in Large Language Models: A Cross-Language Analysis

Probing techniques for large language models (LLMs) have primarily focused on English, overlooking the vast majority of the world's languages. In this paper, we extend these probing methods to a multilingual context, investigating the behaviors of LLMs across diverse languages. We conduct experiments on several open-source LLM models, analyzing probing accuracy, trends across layers, and similarities between probing vectors for multiple languages. Our key findings reveal: (1) a consistent performance gap between high-resource and low-resource languages, with high-resource languages achieving significantly higher probing accuracy; (2) divergent layer-wise accuracy trends, where high-resource languages show substantial improvement in deeper layers similar to English; and (3) higher representational similarities among high-resource languages, with low-resource languages demonstrating lower similarities both among themselves and with high-resource languages. These results highlight significant disparities in LLMs' multilingual capabilities and emphasize the need for improved modeling of low-resource languages.

A new approach for encoding code and assisting code understanding

Some companies(e.g., Microsoft Research and Google DeepMind) have discovered some of the limitations of GPTs autoregressive paradigm next-word prediction, manifested in the model lack of planning, working memory, backtracking, and reasoning skills. GPTs rely on a local and greedy process of generating the next word, without a global understanding of the task or the output.We have confirmed the above limitations through specialized empirical studies of code comprehension. Although GPT4 is good at producing fluent and coherent text, it cannot handle complex logic and generate new code that haven not been seen, and it relies too much on the formatting of the prompt to generate the correct code.We propose a new paradigm for code understanding that goes beyond the next-word prediction paradigm, inspired by the successful application of diffusion techniques to image generation(Dalle2, Sora) and protein structure generation(AlphaFold3), which have no autoregressive constraints.Instead of encoding the code in a form that mimics natural language, we encode the code as a heterogeneous image paradigm with a memory of global information that mimics both images and protein structures.We then refer to Sora's CLIP upstream text-to-image encoder model to design a text-to-code encoder model that can be applied to various downstream code understanding tasks.The model learns the global understanding of code under the new paradigm heterogeneous image, connects the encoding space of text and code, and encodes the input of text into the vector of code most similar to it.Using self-supervised comparative learning on 456,360 text-code pairs, the model achieved a zero-shot prediction of new data. This work is the basis for future work on code generation using diffusion techniques under a new paradigm to avoid autoregressive limitations.

DABL: Detecting Semantic Anomalies in Business Processes Using Large Language Models

Detecting anomalies in business processes is crucial for ensuring operational success. While many existing methods rely on statistical frequency to detect anomalies, it's important to note that infrequent behavior doesn't necessarily imply undesirability. To address this challenge, detecting anomalies from a semantic viewpoint proves to be a more effective approach. However, current semantic anomaly detection methods treat a trace (i.e., process instance) as multiple event pairs, disrupting long-distance dependencies. In this paper, we introduce DABL, a novel approach for detecting semantic anomalies in business processes using large language models (LLMs). We collect 143,137 real-world process models from various domains. By generating normal traces through the playout of these process models and simulating both ordering and exclusion anomalies, we fine-tune Llama 2 using the resulting log. Through extensive experiments, we demonstrate that DABL surpasses existing state-of-the-art semantic anomaly detection methods in terms of both generalization ability and learning of given processes. Users can directly apply DABL to detect semantic anomalies in their own datasets without the need for additional training. Furthermore, DABL offers the capability to interpret the causes of anomalies in natural language, providing valuable insights into the detected anomalies.