A Fast AI Surrogate for Coastal Ocean Circulation Models

Nearly 900 million people live in low-lying coastal zones around the world and bear the brunt of impacts from more frequent and severe hurricanes and storm surges. Oceanographers simulate ocean current circulation along the coasts to develop early warning systems that save lives and prevent loss and damage to property from coastal hazards. Traditionally, such simulations are conducted using coastal ocean circulation models such as the Regional Ocean Modeling System (ROMS), which usually runs on an HPC cluster with multiple CPU cores. However, the process is time-consuming and energy expensive. While coarse-grained ROMS simulations offer faster alternatives, they sacrifice detail and accuracy, particularly in complex coastal environments. Recent advances in deep learning and GPU architecture have enabled the development of faster AI (neural network) surrogates. This paper introduces an AI surrogate based on a 4D Swin Transformer to simulate coastal tidal wave propagation in an estuary for both hindcast and forecast (up to 12 days). Our approach not only accelerates simulations but also incorporates a physics-based constraint to detect and correct inaccurate results, ensuring reliability while minimizing manual intervention. We develop a fully GPU-accelerated workflow, optimizing the model training and inference pipeline on NVIDIA DGX-2 A100 GPUs. Our experiments demonstrate that our AI surrogate reduces the time cost of 12-day forecasting of traditional ROMS simulations from 9,908 seconds (on 512 CPU cores) to 22 seconds (on one A100 GPU), achieving over 450$\times$ speedup while maintaining high-quality simulation results. This work contributes to oceanographic modeling by offering a fast, accurate, and physically consistent alternative to traditional simulation models, particularly for real-time forecasting in rapid disaster response.

Multi-View Neural Differential Equations for Continuous-Time Stream Data in Long-Term Traffic Forecasting

Long-term traffic flow forecasting plays a crucial role in intelligent transportation as it allows traffic managers to adjust their decisions in advance. However, the problem is challenging due to spatio-temporal correlations and complex dynamic patterns in continuous-time stream data. Neural Differential Equations (NDEs) are among the state-of-the-art methods for learning continuous-time traffic dynamics. However, the traditional NDE models face issues in long-term traffic forecasting due to failures in capturing delayed traffic patterns, dynamic edge (location-to-location correlation) patterns, and abrupt trend patterns. To fill this gap, we propose a new NDE architecture called Multi-View Neural Differential Equations. Our model captures current states, delayed states, and trends in different state variables (views) by learning latent multiple representations within Neural Differential Equations. Extensive experiments conducted on several real-world traffic datasets demonstrate that our proposed method outperforms the state-of-the-art and achieves superior prediction accuracy for long-term forecasting and robustness with noisy or missing inputs.

MaxMind: A Memory Loop Network to Enhance Software Productivity based on Large Language Models

The application of large language models to facilitate automated software operations and tool generation (SOTG), thus augmenting software productivity, mirrors the early stages of human evolution when the ability to create and use tools accelerated the progress of civilization. These complex tasks require AI to continuously summarize and improve. Current research often overlooks the importance of converting real-time task experiences into system memory and differentiating the value of existing knowledge for future reference. This paper addresses these issues by evolving external memory models into Memory-Loop Networks for timely memorization and experience referencing. We also enhance a RAG mechanism with knowledge precision segmentation to utilize memory based on value differentiation, and design the MaxMind model for SOTG accordingly.To demonstrate our approach, we developed MaxMind4Sheet, an electronic spreadsheet processing system aligned with the MaxMind philosophy. Comparative experiments with SheetCopilot have demonstrated that the accumulation and recycling of task memories lead to a steady enhancement in task success rate, with an improvement rate of approximately 3%-6% per round in this implementation example. Note that as the memories continue to grow, this cumulative improvement may be substantial. The inclusion of memory recycling can also boost the system's task execution efficiency by up to 25%, and it can address the retraining issue faced by LLMs when handling specialized tasks through memories transfer.These suggest that MaxMind has significant potential to enhance the capabilities and productivity of LLM systems in SOTG.

Spatio-Temporal Partial Sensing Forecast for Long-term Traffic

Traffic forecasting uses recent measurements by sensors installed at chosen locations to forecast the future road traffic. Existing work either assumes all locations are equipped with sensors or focuses on short-term forecast. This paper studies partial sensing traffic forecast of long-term traffic, assuming sensors only at some locations. The study is important in lowering the infrastructure investment cost in traffic management since deploying sensors at all locations could incur prohibitively high cost. However, the problem is challenging due to the unknown distribution at unsensed locations, the intricate spatio-temporal correlation in long-term forecasting, as well as noise in data and irregularities in traffic patterns (e.g., road closure). We propose a Spatio-Temporal Partial Sensing (STPS) forecast model for long-term traffic prediction, with several novel contributions, including a rank-based embedding technique to capture irregularities and overcome noise, a spatial transfer matrix to overcome the spatial distribution shift from permanently sensed locations to unsensed locations, and a multi-step training process that utilizes all available data to successively refine the model parameters for better accuracy. Extensive experiments on several real-world traffic datasets demonstrate that STPS outperforms the state-of-the-art and achieves superior accuracy in partial sensing long-term forecasting.

Large Language Model for Verilog Generation with Golden Code Feedback

Recent advancements in large language models (LLMs) have catalyzed significant interest in the automatic generation of Register-Transfer Level (RTL) code, particularly Verilog, from natural language instructions. While commercial LLMs like ChatGPT have dominated this domain, open-source alternatives have lagged considerably in performance, limiting the flexibility and data privacy of this emerging technology. This study introduces a novel approach utilizing reinforcement learning with golden code feedback to enhance the performance of pre-trained models. Leveraging open-source data and base models, we have achieved state-of-the-art (SOTA) results with a substantial margin. Notably, our 6.7B parameter model \ours{} demonstrates superior performance compared to current best-in-class 13B and 16B models. Furthermore, through a comprehensive analysis of the limitations in direct fine-tuning and the training dynamics of reinforcement learning, we posit that the development of comprehensive supervisory signals, which are align with the inherent parallel semantics of Verilog code, is critical to effective generation. The code and data associated with this research are publicly available at \url{https://github.com/CatIIIIIIII/veriseek}. The model weights can be accessed at \url{https://huggingface.co/WANGNingroci/VeriSeek}.

EvaNet: Elevation-Guided Flood Extent Mapping on Earth Imagery

Accurate and timely mapping of flood extent from high-resolution satellite imagery plays a crucial role in disaster management such as damage assessment and relief activities. However, current state-of-the-art solutions are based on U-Net, which can-not segment the flood pixels accurately due to the ambiguous pixels (e.g., tree canopies, clouds) that prevent a direct judgement from only the spectral features. Thanks to the digital elevation model (DEM) data readily available from sources such as United States Geological Survey (USGS), this work explores the use of an elevation map to improve flood extent mapping. We propose, EvaNet, an elevation-guided segmentation model based on the encoder-decoder architecture with two novel techniques: (1) a loss function encoding the physical law of gravity that if a location is flooded (resp. dry), then its adjacent locations with a lower (resp. higher) elevation must also be flooded (resp. dry); (2) a new (de)convolution operation that integrates the elevation map by a location sensitive gating mechanism to regulate how much spectral features flow through adjacent layers. Extensive experiments show that EvaNet significantly outperforms the U-Net baselines, and works as a perfect drop-in replacement for U-Net in existing solutions to flood extent mapping.

SimFair: Physics-Guided Fairness-Aware Learning with Simulation Models

Fairness-awareness has emerged as an essential building block for the responsible use of artificial intelligence in real applications. In many cases, inequity in performance is due to the change in distribution over different regions. While techniques have been developed to improve the transferability of fairness, a solution to the problem is not always feasible with no samples from the new regions, which is a bottleneck for pure data-driven attempts. Fortunately, physics-based mechanistic models have been studied for many problems with major social impacts. We propose SimFair, a physics-guided fairness-aware learning framework, which bridges the data limitation by integrating physical-rule-based simulation and inverse modeling into the training design. Using temperature prediction as an example, we demonstrate the effectiveness of the proposed SimFair in fairness preservation.

XTSFormer: Cross-Temporal-Scale Transformer for Irregular Time Event Prediction

Event prediction aims to forecast the time and type of a future event based on a historical event sequence. Despite its significance, several challenges exist, including the irregularity of time intervals between consecutive events, the existence of cycles, periodicity, and multi-scale event interactions, as well as the high computational costs for long event sequences. Existing neural temporal point processes (TPPs) methods do not capture the multi-scale nature of event interactions, which is common in many real-world applications such as clinical event data. To address these issues, we propose the cross-temporal-scale transformer (XTSFormer), designed specifically for irregularly timed event data. Our model comprises two vital components: a novel Feature-based Cycle-aware Time Positional Encoding (FCPE) that adeptly captures the cyclical nature of time, and a hierarchical multi-scale temporal attention mechanism. These scales are determined by a bottom-up clustering algorithm. Extensive experiments on several real-world datasets show that our XTSFormer outperforms several baseline methods in prediction performance.

Post-Training Quantization for Re-parameterization via Coarse & Fine Weight Splitting

Although neural networks have made remarkable advancements in various applications, they require substantial computational and memory resources. Network quantization is a powerful technique to compress neural networks, allowing for more efficient and scalable AI deployments. Recently, Re-parameterization has emerged as a promising technique to enhance model performance while simultaneously alleviating the computational burden in various computer vision tasks. However, the accuracy drops significantly when applying quantization on the re-parameterized networks. We identify that the primary challenge arises from the large variation in weight distribution across the original branches. To address this issue, we propose a coarse & fine weight splitting (CFWS) method to reduce quantization error of weight, and develop an improved KL metric to determine optimal quantization scales for activation. To the best of our knowledge, our approach is the first work that enables post-training quantization applicable on re-parameterized networks. For example, the quantized RepVGG-A1 model exhibits a mere 0.3% accuracy loss. The code is in https://github.com/NeonHo/Coarse-Fine-Weight-Split.git

Morphological Profiling for Drug Discovery in the Era of Deep Learning

Morphological profiling is a valuable tool in phenotypic drug discovery. The advent of high-throughput automated imaging has enabled the capturing of a wide range of morphological features of cells or organisms in response to perturbations at the single-cell resolution. Concurrently, significant advances in machine learning and deep learning, especially in computer vision, have led to substantial improvements in analyzing large-scale high-content images at high-throughput. These efforts have facilitated understanding of compound mechanism-of-action (MOA), drug repurposing, characterization of cell morphodynamics under perturbation, and ultimately contributing to the development of novel therapeutics. In this review, we provide a comprehensive overview of the recent advances in the field of morphological profiling. We summarize the image profiling analysis workflow, survey a broad spectrum of analysis strategies encompassing feature engineering- and deep learning-based approaches, and introduce publicly available benchmark datasets. We place a particular emphasis on the application of deep learning in this pipeline, covering cell segmentation, image representation learning, and multimodal learning. Additionally, we illuminate the application of morphological profiling in phenotypic drug discovery and highlight potential challenges and opportunities in this field.