Outlyingness Scores with Cluster Catch Digraphs

This paper introduces two novel, outlyingness scores (OSs) based on Cluster Catch Digraphs (CCDs): Outbound Outlyingness Score (OOS) and Inbound Outlyingness Score (IOS). These scores enhance the interpretability of outlier detection results. Both OSs employ graph-, density-, and distribution-based techniques, tailored to high-dimensional data with varying cluster shapes and intensities. OOS evaluates the outlyingness of a point relative to its nearest neighbors, while IOS assesses the total ``influence" a point receives from others within its cluster. Both OSs effectively identify global and local outliers, invariant to data collinearity. Moreover, IOS is robust to the masking problems. With extensive Monte Carlo simulations, we compare the performance of both OSs with CCD-based, traditional, and state-of-the-art outlier detection methods. Both OSs exhibit substantial overall improvements over the CCD-based methods in both artificial and real-world data sets, particularly with IOS, which delivers the best overall performance among all the methods, especially in high-dimensional settings. Keywords: Outlier detection, Outlyingness score, Graph-based clustering, Cluster catch digraphs, High-dimensional data.

Cluster Catch Digraphs with the Nearest Neighbor Distance

We introduce a new method for clustering based on Cluster Catch Digraphs (CCDs). The new method addresses the limitations of RK-CCDs by employing a new variant of spatial randomness test that employs the nearest neighbor distance (NND) instead of the Ripley's K function used by RK-CCDs. We conduct a comprehensive Monte Carlo analysis to assess the performance of our method, considering factors such as dimensionality, data set size, number of clusters, cluster volumes, and inter-cluster distance. Our method is particularly effective for high-dimensional data sets, comparable to or outperforming KS-CCDs and RK-CCDs that rely on a KS-type statistic or the Ripley's K function. We also evaluate our methods using real and complex data sets, comparing them to well-known clustering methods. Again, our methods exhibit competitive performance, producing high-quality clusters with desirable properties. Keywords: Graph-based clustering, Cluster catch digraphs, High-dimensional data, The nearest neighbor distance, Spatial randomness test

TSEML: A task-specific embedding-based method for few-shot classification of cancer molecular subtypes

Molecular subtyping of cancer is recognized as a critical and challenging upstream task for personalized therapy. Existing deep learning methods have achieved significant performance in this domain when abundant data samples are available. However, the acquisition of densely labeled samples for cancer molecular subtypes remains a significant challenge for conventional data-intensive deep learning approaches. In this work, we focus on the few-shot molecular subtype prediction problem in heterogeneous and small cancer datasets, aiming to enhance precise diagnosis and personalized treatment. We first construct a new few-shot dataset for cancer molecular subtype classification and auxiliary cancer classification, named TCGA Few-Shot, from existing publicly available datasets. To effectively leverage the relevant knowledge from both tasks, we introduce a task-specific embedding-based meta-learning framework (TSEML). TSEML leverages the synergistic strengths of a model-agnostic meta-learning (MAML) approach and a prototypical network (ProtoNet) to capture diverse and fine-grained features. Comparative experiments conducted on the TCGA Few-Shot dataset demonstrate that our TSEML framework achieves superior performance in addressing the problem of few-shot molecular subtype classification.

ChatTS: Aligning Time Series with LLMs via Synthetic Data for Enhanced Understanding and Reasoning

Understanding time series is crucial for its application in real-world scenarios. Recently, large language models (LLMs) have been increasingly applied to time series tasks, leveraging their strong language capabilities to enhance various applications. However, research on multimodal LLMs (MLLMs) for time series understanding and reasoning remains limited, primarily due to the scarcity of high-quality datasets that align time series with textual information. This paper introduces ChatTS, a novel MLLM designed for time series analysis. ChatTS treats time series as a modality, similar to how vision MLLMs process images, enabling it to perform both understanding and reasoning with time series. To address the scarcity of training data, we propose an attribute-based method for generating synthetic time series with detailed attribute descriptions. We further introduce Time Series Evol-Instruct, a novel approach that generates diverse time series Q&As, enhancing the model's reasoning capabilities. To the best of our knowledge, ChatTS is the first MLLM that takes multivariate time series as input, which is fine-tuned exclusively on synthetic datasets. We evaluate its performance using benchmark datasets with real-world data, including six alignment tasks and four reasoning tasks. Our results show that ChatTS significantly outperforms existing vision-based MLLMs (e.g., GPT-4o) and text/agent-based LLMs, achieving a 46.0% improvement in alignment tasks and a 25.8% improvement in reasoning tasks.

Outlier Detection with Cluster Catch Digraphs

This paper introduces a novel family of outlier detection algorithms based on Cluster Catch Digraphs (CCDs), specifically tailored to address the challenges of high dimensionality and varying cluster shapes, which deteriorate the performance of most traditional outlier detection methods. We propose the Uniformity-Based CCD with Mutual Catch Graph (U-MCCD), the Uniformity- and Neighbor-Based CCD with Mutual Catch Graph (UN-MCCD), and their shape-adaptive variants (SU-MCCD and SUN-MCCD), which are designed to detect outliers in data sets with arbitrary cluster shapes and high dimensions. We present the advantages and shortcomings of these algorithms and provide the motivation or need to define each particular algorithm. Through comprehensive Monte Carlo simulations, we assess their performance and demonstrate the robustness and effectiveness of our algorithms across various settings and contamination levels. We also illustrate the use of our algorithms on various real-life data sets. The U-MCCD algorithm efficiently identifies outliers while maintaining high true negative rates, and the SU-MCCD algorithm shows substantial improvement in handling non-uniform clusters. Additionally, the UN-MCCD and SUN-MCCD algorithms address the limitations of existing methods in high-dimensional spaces by utilizing Nearest Neighbor Distances (NND) for clustering and outlier detection. Our results indicate that these novel algorithms offer substantial advancements in the accuracy and adaptability of outlier detection, providing a valuable tool for various real-world applications. Keyword: Outlier detection, Graph-based clustering, Cluster catch digraphs, $k$-nearest-neighborhood, Mutual catch graphs, Nearest neighbor distance.

AU-vMAE: Knowledge-Guide Action Units Detection via Video Masked Autoencoder

Current Facial Action Unit (FAU) detection methods generally encounter difficulties due to the scarcity of labeled video training data and the limited number of training face IDs, which renders the trained feature extractor insufficient coverage for modeling the large diversity of inter-person facial structures and movements. To explicitly address the above challenges, we propose a novel video-level pre-training scheme by fully exploring the multi-label property of FAUs in the video as well as the temporal label consistency. At the heart of our design is a pre-trained video feature extractor based on the video-masked autoencoder together with a fine-tuning network that jointly completes the multi-level video FAUs analysis tasks, \emph{i.e.} integrating both video-level and frame-level FAU detections, thus dramatically expanding the supervision set from sparse FAUs annotations to ALL video frames including masked ones. Moreover, we utilize inter-frame and intra-frame AU pair state matrices as prior knowledge to guide network training instead of traditional Graph Neural Networks, for better temporal supervision. Our approach demonstrates substantial enhancement in performance compared to the existing state-of-the-art methods used in BP4D and DISFA FAUs datasets.

Toward Tiny and High-quality Facial Makeup with Data Amplify Learning

Contemporary makeup approaches primarily hinge on unpaired learning paradigms, yet they grapple with the challenges of inaccurate supervision (e.g., face misalignment) and sophisticated facial prompts (including face parsing, and landmark detection). These challenges prohibit low-cost deployment of facial makeup models, especially on mobile devices. To solve above problems, we propose a brand-new learning paradigm, termed "Data Amplify Learning (DAL)," alongside a compact makeup model named "TinyBeauty." The core idea of DAL lies in employing a Diffusion-based Data Amplifier (DDA) to "amplify" limited images for the model training, thereby enabling accurate pixel-to-pixel supervision with merely a handful of annotations. Two pivotal innovations in DDA facilitate the above training approach: (1) A Residual Diffusion Model (RDM) is designed to generate high-fidelity detail and circumvent the detail vanishing problem in the vanilla diffusion models; (2) A Fine-Grained Makeup Module (FGMM) is proposed to achieve precise makeup control and combination while retaining face identity. Coupled with DAL, TinyBeauty necessitates merely 80K parameters to achieve a state-of-the-art performance without intricate face prompts. Meanwhile, TinyBeauty achieves a remarkable inference speed of up to 460 fps on the iPhone 13. Extensive experiments show that DAL can produce highly competitive makeup models using only 5 image pairs.

Deep Rib Fracture Instance Segmentation and Classification from CT on the RibFrac Challenge

Rib fractures are a common and potentially severe injury that can be challenging and labor-intensive to detect in CT scans. While there have been efforts to address this field, the lack of large-scale annotated datasets and evaluation benchmarks has hindered the development and validation of deep learning algorithms. To address this issue, the RibFrac Challenge was introduced, providing a benchmark dataset of over 5,000 rib fractures from 660 CT scans, with voxel-level instance mask annotations and diagnosis labels for four clinical categories (buckle, nondisplaced, displaced, or segmental). The challenge includes two tracks: a detection (instance segmentation) track evaluated by an FROC-style metric and a classification track evaluated by an F1-style metric. During the MICCAI 2020 challenge period, 243 results were evaluated, and seven teams were invited to participate in the challenge summary. The analysis revealed that several top rib fracture detection solutions achieved performance comparable or even better than human experts. Nevertheless, the current rib fracture classification solutions are hardly clinically applicable, which can be an interesting area in the future. As an active benchmark and research resource, the data and online evaluation of the RibFrac Challenge are available at the challenge website. As an independent contribution, we have also extended our previous internal baseline by incorporating recent advancements in large-scale pretrained networks and point-based rib segmentation techniques. The resulting FracNet+ demonstrates competitive performance in rib fracture detection, which lays a foundation for further research and development in AI-assisted rib fracture detection and diagnosis.

Beyond PID Controllers: PPO with Neuralized PID Policy for Proton Beam Intensity Control in Mu2e

We introduce a novel Proximal Policy Optimization (PPO) algorithm aimed at addressing the challenge of maintaining a uniform proton beam intensity delivery in the Muon to Electron Conversion Experiment (Mu2e) at Fermi National Accelerator Laboratory (Fermilab). Our primary objective is to regulate the spill process to ensure a consistent intensity profile, with the ultimate goal of creating an automated controller capable of providing real-time feedback and calibration of the Spill Regulation System (SRS) parameters on a millisecond timescale. We treat the Mu2e accelerator system as a Markov Decision Process suitable for Reinforcement Learning (RL), utilizing PPO to reduce bias and enhance training stability. A key innovation in our approach is the integration of a neuralized Proportional-Integral-Derivative (PID) controller into the policy function, resulting in a significant improvement in the Spill Duty Factor (SDF) by 13.6%, surpassing the performance of the current PID controller baseline by an additional 1.6%. This paper presents the preliminary offline results based on a differentiable simulator of the Mu2e accelerator. It paves the groundwork for real-time implementations and applications, representing a crucial step towards automated proton beam intensity control for the Mu2e experiment.

SieveNet: Selecting Point-Based Features for Mesh Networks

Meshes are widely used in 3D computer vision and graphics, but their irregular topology poses challenges in applying them to existing neural network architectures. Recent advances in mesh neural networks turn to remeshing and push the boundary of pioneer methods that solely take the raw meshes as input. Although the remeshing offers a regular topology that significantly facilitates the design of mesh network architectures, features extracted from such remeshed proxies may struggle to retain the underlying geometry faithfully, limiting the subsequent neural network's capacity. To address this issue, we propose SieveNet, a novel paradigm that takes into account both the regular topology and the exact geometry. Specifically, this method utilizes structured mesh topology from remeshing and accurate geometric information from distortion-aware point sampling on the surface of the original mesh. Furthermore, our method eliminates the need for hand-crafted feature engineering and can leverage off-the-shelf network architectures such as the vision transformer. Comprehensive experimental results on classification and segmentation tasks well demonstrate the effectiveness and superiority of our method.