Abstract:Precipitation nowcasting plays a pivotal role in socioeconomic sectors, especially in severe convective weather warnings. Although notable progress has been achieved by approaches mining the spatiotemporal correlations with deep learning, these methods still suffer severe blurriness as the lead time increases, which hampers accurate predictions for extreme precipitation. To alleviate blurriness, researchers explore generative methods conditioned on blurry predictions. However, the pairs of blurry predictions and corresponding ground truth need to be generated in advance, making the training pipeline cumbersome and limiting the generality of generative models within blur modes that appear in training data. By rethinking the blurriness in precipitation nowcasting as a blur kernel acting on predictions, we propose an unsupervised postprocessing method to eliminate the blurriness without the requirement of training with the pairs of blurry predictions and corresponding ground truth. Specifically, we utilize blurry predictions to guide the generation process of a pre-trained unconditional denoising diffusion probabilistic model (DDPM) to obtain high-fidelity predictions with eliminated blurriness. A zero-shot blur kernel estimation mechanism and an auto-scale denoise guidance strategy are introduced to adapt the unconditional DDPM to any blurriness modes varying from datasets and lead times in precipitation nowcasting. Extensive experiments are conducted on 7 precipitation radar datasets, demonstrating the generality and superiority of our method.
Abstract:Data assimilation is a vital component in modern global medium-range weather forecasting systems to obtain the best estimation of the atmospheric state by combining the short-term forecast and observations. Recently, AI-based data assimilation approaches have attracted increasing attention for their significant advantages over traditional techniques in terms of computational consumption. However, existing AI-based data assimilation methods can only handle observations with a specific resolution, lacking the compatibility and generalization ability to assimilate observations with other resolutions. Considering that complex real-world observations often have different resolutions, we propose the \textit{\textbf{Fourier Neural Processes}} (FNP) for \textit{arbitrary-resolution data assimilation} in this paper. Leveraging the efficiency of the designed modules and flexible structure of neural processes, FNP achieves state-of-the-art results in assimilating observations with varying resolutions, and also exhibits increasing advantages over the counterparts as the resolution and the amount of observations increase. Moreover, our FNP trained on a fixed resolution can directly handle the assimilation of observations with out-of-distribution resolutions and the observational information reconstruction task without additional fine-tuning, demonstrating its excellent generalization ability across data resolutions as well as across tasks.
Abstract:The weather forecasting system is important for science and society, and significant achievements have been made in applying artificial intelligence (AI) to medium-range weather forecasting. However, existing AI-based weather forecasting models still rely on analysis or reanalysis products from the traditional numerical weather prediction (NWP) systems as initial conditions for making predictions, preventing them from being fully independent systems. As a crucial component of an end-to-end global weather forecasting system, data assimilation is vital in generating initial states for forecasting. In this paper, we present an AI-based data assimilation model, i.e., Adas, for global weather variables, which learns to generate the analysis from the background and sparse observations. Different from existing assimilation methods, Adas employs the gated convolution module to handle sparse observations and the gated cross-attention module for capturing the interactions between observations and background efficiently, which are guided by the confidence matrix to represent the availability and quality of observations. Then, we combine Adas with the advanced AI-based weather forecasting model (i.e., FengWu) and construct the first end-to-end AI-based global weather forecasting system: FengWu-Adas. Experiments demonstrate that Adas can assimilate the simulated global observations with the AI-generated background through a one-year simulation and generate high-quality analysis stably in a cyclic manner. Based on the generated analysis, FengWu-Adas exhibits skillful performance and outperforms the Integrated Forecasting System (IFS) in weather forecasting over seven days.
Abstract:Importance: Social determinants of health (SDOH) are known to be associated with increased risk of suicidal behaviors, but few studies utilized SDOH from unstructured electronic health record (EHR) notes. Objective: To investigate associations between suicide and recent SDOH, identified using structured and unstructured data. Design: Nested case-control study. Setting: EHR data from the US Veterans Health Administration (VHA). Participants: 6,122,785 Veterans who received care in the US VHA between October 1, 2010, and September 30, 2015. Exposures: Occurrence of SDOH over a maximum span of two years compared with no occurrence of SDOH. Main Outcomes and Measures: Cases of suicide deaths were matched with 4 controls on birth year, cohort entry date, sex, and duration of follow-up. We developed an NLP system to extract SDOH from unstructured notes. Structured data, NLP on unstructured data, and combining them yielded seven, eight and nine SDOH respectively. Adjusted odds ratios (aORs) and 95% confidence intervals (CIs) were estimated using conditional logistic regression. Results: In our cohort, 8,821 Veterans committed suicide during 23,725,382 person-years of follow-up (incidence rate 37.18 /100,000 person-years). Our cohort was mostly male (92.23%) and white (76.99%). Across the six common SDOH as covariates, NLP-extracted SDOH, on average, covered 84.38% of all SDOH occurrences. All SDOH, measured by structured data and NLP, were significantly associated with increased risk of suicide. The SDOH with the largest effects was legal problems (aOR=2.67, 95% CI=2.46-2.89), followed by violence (aOR=2.26, 95% CI=2.11-2.43). NLP-extracted and structured SDOH were also associated with suicide. Conclusions and Relevance: NLP-extracted SDOH were always significantly associated with increased risk of suicide among Veterans, suggesting the potential of NLP in public health studies.
Abstract:Statistical learning with a large number of rare binary features is commonly encountered in analyzing electronic health records (EHR) data, especially in the modeling of disease onset with prior medical diagnoses and procedures. Dealing with the resulting highly sparse and large-scale binary feature matrix is notoriously challenging as conventional methods may suffer from a lack of power in testing and inconsistency in model fitting while machine learning methods may suffer from the inability of producing interpretable results or clinically-meaningful risk factors. To improve EHR-based modeling and utilize the natural hierarchical structure of disease classification, we propose a tree-guided feature selection and logic aggregation approach for large-scale regression with rare binary features, in which dimension reduction is achieved through not only a sparsity pursuit but also an aggregation promoter with the logic operator of ``or''. We convert the combinatorial problem into a convex linearly-constrained regularized estimation, which enables scalable computation with theoretical guarantees. In a suicide risk study with EHR data, our approach is able to select and aggregate prior mental health diagnoses as guided by the diagnosis hierarchy of the International Classification of Diseases. By balancing the rarity and specificity of the EHR diagnosis records, our strategy improves both prediction and model interpretation. We identify important higher-level categories and subcategories of mental health conditions and simultaneously determine the level of specificity needed for each of them in predicting suicide risk.
Abstract:In this paper, we follow Eftekhari's work to give a non-local convergence analysis of deep linear networks. Specifically, we consider optimizing deep linear networks which have a layer with one neuron under quadratic loss. We describe the convergent point of trajectories with arbitrary starting point under gradient flow, including the paths which converge to one of the saddle points or the original point. We also show specific convergence rates of trajectories that converge to the global minimizer by stages. To achieve these results, this paper mainly extends the machinery in Eftekhari's work to provably identify the rank-stable set and the global minimizer convergent set. We also give specific examples to show the necessity of our definitions. Crucially, as far as we know, our results appear to be the first to give a non-local global analysis of linear neural networks from arbitrary initialized points, rather than the lazy training regime which has dominated the literature of neural networks, and restricted benign initialization in Eftekhari's work. We also note that extending our results to general linear networks without one hidden neuron assumption remains a challenging open problem.
Abstract:Selection bias is prevalent in the data for training and evaluating recommendation systems with explicit feedback. For example, users tend to rate items they like. However, when rating an item concerning a specific user, most of the recommendation algorithms tend to rely too much on his/her rating (feedback) history. This introduces implicit bias on the recommendation system, which is referred to as user feedback-loop bias in this paper. We propose a systematic and dynamic way to correct such bias and to obtain more diverse and objective recommendations by utilizing temporal rating information. Specifically, our method includes a deep-learning component to learn each user's dynamic rating history embedding for the estimation of the probability distribution of the items that the user rates sequentially. These estimated dynamic exposure probabilities are then used as propensity scores to train an inverse-propensity-scoring (IPS) rating predictor. We empirically validated the existence of such user feedback-loop bias in real world recommendation systems and compared the performance of our method with the baseline models that are either without de-biasing or with propensity scores estimated by other methods. The results show the superiority of our approach.
Abstract:In this paper, we focus on effective learning over a collaborative research network involving multiple clients. Each client has its own sample population which may not be shared with other clients due to privacy concerns. The goal is to learn a model for each client, which behaves better than the one learned from its own data, through secure collaborations with other clients in the network. Due to the discrepancies of the sample distributions across different clients, it is not necessarily that collaborating with everyone will lead to the best local models. We propose a learning to collaborate framework, where each client can choose to collaborate with certain members in the network to achieve a "collaboration equilibrium", where smaller collaboration coalitions are formed within the network so that each client can obtain the model with the best utility. We propose the concept of benefit graph which describes how each client can benefit from collaborating with other clients and develop a Pareto optimization approach to obtain it. Finally the collaboration coalitions can be derived from it based on graph operations. Our framework provides a new way of setting up collaborations in a research network. Experiments on both synthetic and real world data sets are provided to demonstrate the effectiveness of our method.
Abstract:Finite Mixture Regression (FMR) refers to the mixture modeling scheme which learns multiple regression models from the training data set. Each of them is in charge of a subset. FMR is an effective scheme for handling sample heterogeneity, where a single regression model is not enough for capturing the complexities of the conditional distribution of the observed samples given the features. In this paper, we propose an FMR model that 1) finds sample clusters and jointly models multiple incomplete mixed-type targets simultaneously, 2) achieves shared feature selection among tasks and cluster components, and 3) detects anomaly tasks or clustered structure among tasks, and accommodates outlier samples. We provide non-asymptotic oracle performance bounds for our model under a high-dimensional learning framework. The proposed model is evaluated on both synthetic and real-world data sets. The results show that our model can achieve state-of-the-art performance.
Abstract:Motivated by the pressing need for suicide prevention through improving behavioral healthcare, we use medical claims data to study the risk of subsequent suicide attempts for patients who were hospitalized due to suicide attempts and later discharged. Understanding the risk behaviors of such patients at elevated suicide risk is an important step towards the goal of "Zero Suicide". An immediate and unconventional challenge is that the identification of suicide attempts from medical claims contains substantial uncertainty: almost 20\% of "suspected" suicide attempts are identified from diagnostic codes indicating external causes of injury and poisoning with undermined intent. It is thus of great interest to learn which of these undetermined events are more likely actual suicide attempts and how to properly utilize them in survival analysis with severe censoring. To tackle these interrelated problems, we develop an integrative Cox cure model with regularization to perform survival regression with uncertain events and a latent cure fraction. We apply the proposed approach to study the risk of subsequent suicide attempt after suicide-related hospitalization for adolescent and young adult population, using medical claims data from Connecticut. The identified risk factors are highly interpretable; more intriguingly, our method distinguishes the risk factors that are most helpful in assessing either susceptibility or timing of subsequent attempt. The predicted statuses of the uncertain attempts are further investigated, leading to several new insights on suicide event identification.