Identifying General Mechanism Shifts in Linear Causal Representations

We consider the linear causal representation learning setting where we observe a linear mixing of $d$ unknown latent factors, which follow a linear structural causal model. Recent work has shown that it is possible to recover the latent factors as well as the underlying structural causal model over them, up to permutation and scaling, provided that we have at least $d$ environments, each of which corresponds to perfect interventions on a single latent node (factor). After this powerful result, a key open problem faced by the community has been to relax these conditions: allow for coarser than perfect single-node interventions, and allow for fewer than $d$ of them, since the number of latent factors $d$ could be very large. In this work, we consider precisely such a setting, where we allow a smaller than $d$ number of environments, and also allow for very coarse interventions that can very coarsely \textit{change the entire causal graph over the latent factors}. On the flip side, we relax what we wish to extract to simply the \textit{list of nodes that have shifted between one or more environments}. We provide a surprising identifiability result that it is indeed possible, under some very mild standard assumptions, to identify the set of shifted nodes. Our identifiability proof moreover is a constructive one: we explicitly provide necessary and sufficient conditions for a node to be a shifted node, and show that we can check these conditions given observed data. Our algorithm lends itself very naturally to the sample setting where instead of just interventional distributions, we are provided datasets of samples from each of these distributions. We corroborate our results on both synthetic experiments as well as an interesting psychometric dataset. The code can be found at https://github.com/TianyuCodings/iLCS.

ResiDual Transformer Alignment with Spectral Decomposition

When examined through the lens of their residual streams, a puzzling property emerges in transformer networks: residual contributions (e.g., attention heads) sometimes specialize in specific tasks or input attributes. In this paper, we analyze this phenomenon in vision transformers, focusing on the spectral geometry of residuals, and explore its implications for modality alignment in vision-language models. First, we link it to the intrinsically low-dimensional structure of visual head representations, zooming into their principal components and showing that they encode specialized roles across a wide variety of input data distributions. Then, we analyze the effect of head specialization in multimodal models, focusing on how improved alignment between text and specialized heads impacts zero-shot classification performance. This specialization-performance link consistently holds across diverse pre-training data, network sizes, and objectives, demonstrating a powerful new mechanism for boosting zero-shot classification through targeted alignment. Ultimately, we translate these insights into actionable terms by introducing ResiDual, a technique for spectral alignment of the residual stream. Much like panning for gold, it lets the noise from irrelevant unit principal components (i.e., attributes) wash away to amplify task-relevant ones. Remarkably, this dual perspective on modality alignment yields fine-tuning level performances on different data distributions while modeling an extremely interpretable and parameter-efficient transformation, as we extensively show on more than 50 (pre-trained network, dataset) pairs.

Scalable Mechanistic Neural Networks

We propose Scalable Mechanistic Neural Network (S-MNN), an enhanced neural network framework designed for scientific machine learning applications involving long temporal sequences. By reformulating the original Mechanistic Neural Network (MNN) (Pervez et al., 2024), we reduce the computational time and space complexities from cubic and quadratic with respect to the sequence length, respectively, to linear. This significant improvement enables efficient modeling of long-term dynamics without sacrificing accuracy or interpretability. Extensive experiments demonstrate that S-MNN matches the original MNN in precision while substantially reducing computational resources. Consequently, S-MNN can drop-in replace the original MNN in applications, providing a practical and efficient tool for integrating mechanistic bottlenecks into neural network models of complex dynamical systems.

Look Around and Find Out: OOD Detection with Relative Angles

Deep learning systems deployed in real-world applications often encounter data that is different from their in-distribution (ID). A reliable system should ideally abstain from making decisions in this out-of-distribution (OOD) setting. Existing state-of-the-art methods primarily focus on feature distances, such as k-th nearest neighbors and distances to decision boundaries, either overlooking or ineffectively using in-distribution statistics. In this work, we propose a novel angle-based metric for OOD detection that is computed relative to the in-distribution structure. We demonstrate that the angles between feature representations and decision boundaries, viewed from the mean of in-distribution features, serve as an effective discriminative factor between ID and OOD data. Our method achieves state-of-the-art performance on CIFAR-10 and ImageNet benchmarks, reducing FPR95 by 0.88% and 7.74% respectively. Our score function is compatible with existing feature space regularization techniques, enhancing performance. Additionally, its scale-invariance property enables creating an ensemble of models for OOD detection via simple score summation.

Adjusting Pretrained Backbones for Performativity

With the widespread deployment of deep learning models, they influence their environment in various ways. The induced distribution shifts can lead to unexpected performance degradation in deployed models. Existing methods to anticipate performativity typically incorporate information about the deployed model into the feature vector when predicting future outcomes. While enjoying appealing theoretical properties, modifying the input dimension of the prediction task is often not practical. To address this, we propose a novel technique to adjust pretrained backbones for performativity in a modular way, achieving better sample efficiency and enabling the reuse of existing deep learning assets. Focusing on performative label shift, the key idea is to train a shallow adapter module to perform a Bayes-optimal label shift correction to the backbone's logits given a sufficient statistic of the model to be deployed. As such, our framework decouples the construction of input-specific feature embeddings from the mechanism governing performativity. Motivated by dynamic benchmarking as a use-case, we evaluate our approach under adversarial sampling, for vision and language tasks. We show how it leads to smaller loss along the retraining trajectory and enables us to effectively select among candidate models to anticipate performance degradations. More broadly, our work provides a first baseline for addressing performativity in deep learning.

Unifying Causal Representation Learning with the Invariance Principle

Causal representation learning aims at recovering latent causal variables from high-dimensional observations to solve causal downstream tasks, such as predicting the effect of new interventions or more robust classification. A plethora of methods have been developed, each tackling carefully crafted problem settings that lead to different types of identifiability. The folklore is that these different settings are important, as they are often linked to different rungs of Pearl's causal hierarchy, although not all neatly fit. Our main contribution is to show that many existing causal representation learning approaches methodologically align the representation to known data symmetries. Identification of the variables is guided by equivalence classes across different data pockets that are not necessarily causal. This result suggests important implications, allowing us to unify many existing approaches in a single method that can mix and match different assumptions, including non-causal ones, based on the invariances relevant to our application. It also significantly benefits applicability, which we demonstrate by improving treatment effect estimation on real-world high-dimensional ecological data. Overall, this paper clarifies the role of causality assumptions in the discovery of causal variables and shifts the focus to preserving data symmetries.

NeCo: Improving DINOv2's spatial representations in 19 GPU hours with Patch Neighbor Consistency

We propose sorting patch representations across views as a novel self-supervised learning signal to improve pretrained representations. To this end, we introduce NeCo: Patch Neighbor Consistency, a novel training loss that enforces patch-level nearest neighbor consistency across a student and teacher model, relative to reference batches. Our method leverages a differentiable sorting method applied on top of pretrained representations, such as DINOv2-registers to bootstrap the learning signal and further improve upon them. This dense post-pretraining leads to superior performance across various models and datasets, despite requiring only 19 hours on a single GPU. We demonstrate that this method generates high-quality dense feature encoders and establish several new state-of-the-art results: +5.5% and + 6% for non-parametric in-context semantic segmentation on ADE20k and Pascal VOC, and +7.2% and +5.7% for linear segmentation evaluations on COCO-Things and -Stuff.

Score matching through the roof: linear, nonlinear, and latent variables causal discovery

Causal discovery from observational data holds great promise, but existing methods rely on strong assumptions about the underlying causal structure, often requiring full observability of all relevant variables. We tackle these challenges by leveraging the score function $\nabla \log p(X)$ of observed variables for causal discovery and propose the following contributions. First, we generalize the existing results of identifiability with the score to additive noise models with minimal requirements on the causal mechanisms. Second, we establish conditions for inferring causal relations from the score even in the presence of hidden variables; this result is two-faced: we demonstrate the score's potential as an alternative to conditional independence tests to infer the equivalence class of causal graphs with hidden variables, and we provide the necessary conditions for identifying direct causes in latent variable models. Building on these insights, we propose a flexible algorithm for causal discovery across linear, nonlinear, and latent variable models, which we empirically validate.

Latent Space Translation via Inverse Relative Projection

The emergence of similar representations between independently trained neural models has sparked significant interest in the representation learning community, leading to the development of various methods to obtain communication between latent spaces. "Latent space communication" can be achieved in two ways: i) by independently mapping the original spaces to a shared or relative one; ii) by directly estimating a transformation from a source latent space to a target one. In this work, we combine the two into a novel method to obtain latent space translation through the relative space. By formalizing the invertibility of angle-preserving relative representations and assuming the scale invariance of decoder modules in neural models, we can effectively use the relative space as an intermediary, independently projecting onto and from other semantically similar spaces. Extensive experiments over various architectures and datasets validate our scale invariance assumption and demonstrate the high accuracy of our method in latent space translation. We also apply our method to zero-shot stitching between arbitrary pre-trained text and image encoders and their classifiers, even across modalities. Our method has significant potential for facilitating the reuse of models in a practical manner via compositionality.

Latent Functional Maps

Neural models learn data representations that lie on low-dimensional manifolds, yet modeling the relation between these representational spaces is an ongoing challenge. By integrating spectral geometry principles into neural modeling, we show that this problem can be better addressed in the functional domain, mitigating complexity, while enhancing interpretability and performances on downstream tasks. To this end, we introduce a multi-purpose framework to the representation learning community, which allows to: (i) compare different spaces in an interpretable way and measure their intrinsic similarity; (ii) find correspondences between them, both in unsupervised and weakly supervised settings, and (iii) to effectively transfer representations between distinct spaces. We validate our framework on various applications, ranging from stitching to retrieval tasks, demonstrating that latent functional maps can serve as a swiss-army knife for representation alignment.