Coping with low data availability for social media crisis message categorisation

During crisis situations, social media allows people to quickly share information, including messages requesting help. This can be valuable to emergency responders, who need to categorise and prioritise these messages based on the type of assistance being requested. However, the high volume of messages makes it difficult to filter and prioritise them without the use of computational techniques. Fully supervised filtering techniques for crisis message categorisation typically require a large amount of annotated training data, but this can be difficult to obtain during an ongoing crisis and is expensive in terms of time and labour to create. This thesis focuses on addressing the challenge of low data availability when categorising crisis messages for emergency response. It first presents domain adaptation as a solution for this problem, which involves learning a categorisation model from annotated data from past crisis events (source domain) and adapting it to categorise messages from an ongoing crisis event (target domain). In many-to-many adaptation, where the model is trained on multiple past events and adapted to multiple ongoing events, a multi-task learning approach is proposed using pre-trained language models. This approach outperforms baselines and an ensemble approach further improves performance...

STA: Self-controlled Text Augmentation for Improving Text Classifications

Despite recent advancements in Machine Learning, many tasks still involve working in low-data regimes which can make solving natural language problems difficult. Recently, a number of text augmentation techniques have emerged in the field of Natural Language Processing (NLP) which can enrich the training data with new examples, though they are not without their caveats. For instance, simple rule-based heuristic methods are effective, but lack variation in semantic content and syntactic structure with respect to the original text. On the other hand, more complex deep learning approaches can cause extreme shifts in the intrinsic meaning of the text and introduce unwanted noise into the training data. To more reliably control the quality of the augmented examples, we introduce a state-of-the-art approach for Self-Controlled Text Augmentation (STA). Our approach tightly controls the generation process by introducing a self-checking procedure to ensure that generated examples retain the semantic content of the original text. Experimental results on multiple benchmarking datasets demonstrate that STA substantially outperforms existing state-of-the-art techniques, whilst qualitative analysis reveals that the generated examples are both lexically diverse and semantically reliable.

UCD-CS at TREC 2021 Incident Streams Track

In recent years, the task of mining important information from social media posts during crises has become a focus of research for the purposes of assisting emergency response (ES). The TREC Incident Streams (IS) track is a research challenge organised for this purpose. The track asks participating systems to both classify a stream of crisis-related tweets into humanitarian aid related information types and estimate their importance regarding criticality. The former refers to a multi-label information type classification task and the latter refers to a priority estimation task. In this paper, we report on the participation of the University College Dublin School of Computer Science (UCD-CS) in TREC-IS 2021. We explored a variety of approaches, including simple machine learning algorithms, multi-task learning techniques, text augmentation, and ensemble approaches. The official evaluation results indicate that our runs achieve the highest scores in many metrics. To aid reproducibility, our code is publicly available at https://github.com/wangcongcong123/crisis-mtl.

Crisis Domain Adaptation Using Sequence-to-sequence Transformers

User-generated content (UGC) on social media can act as a key source of information for emergency responders in crisis situations. However, due to the volume concerned, computational techniques are needed to effectively filter and prioritise this content as it arises during emerging events. In the literature, these techniques are trained using annotated content from previous crises. In this paper, we investigate how this prior knowledge can be best leveraged for new crises by examining the extent to which crisis events of a similar type are more suitable for adaptation to new events (cross-domain adaptation). Given the recent successes of transformers in various language processing tasks, we propose CAST: an approach for Crisis domain Adaptation leveraging Sequence-to-sequence Transformers. We evaluate CAST using two major crisis-related message classification datasets. Our experiments show that our CAST-based best run without using any target data achieves the state of the art performance in both in-domain and cross-domain contexts. Moreover, CAST is particularly effective in one-to-one cross-domain adaptation when trained with a larger language model. In many-to-one adaptation where multiple crises are jointly used as the source domain, CAST further improves its performance. In addition, we find that more similar events are more likely to bring better adaptation performance whereas fine-tuning using dissimilar events does not help for adaptation. To aid reproducibility, we open source our code to the community.

Transformer-based Multi-task Learning for Disaster Tweet Categorisation

Social media has enabled people to circulate information in a timely fashion, thus motivating people to post messages seeking help during crisis situations. These messages can contribute to the situational awareness of emergency responders, who have a need for them to be categorised according to information types (i.e. the type of aid services the messages are requesting). We introduce a transformer-based multi-task learning (MTL) technique for classifying information types and estimating the priority of these messages. We evaluate the effectiveness of our approach with a variety of metrics by submitting runs to the TREC Incident Streams (IS) track: a research initiative specifically designed for disaster tweet classification and prioritisation. The results demonstrate that our approach achieves competitive performance in most metrics as compared to other participating runs. Subsequently, we find that an ensemble approach combining disparate transformer encoders within our approach helps to improve the overall effectiveness to a significant extent, achieving state-of-the-art performance in almost every metric. We make the code publicly available so that our work can be reproduced and used as a baseline for the community for future work in this domain.

Multi-task transfer learning for finding actionable information from crisis-related messages on social media

The Incident streams (IS) track is a research challenge aimed at finding important information from social media during crises for emergency response purposes. More specifically, given a stream of crisis-related tweets, the IS challenge asks a participating system to 1) classify what the types of users' concerns or needs are expressed in each tweet, known as the information type (IT) classification task and 2) estimate how critical each tweet is with regard to emergency response, known as the priority level prediction task. In this paper, we describe our multi-task transfer learning approach for this challenge. Our approach leverages state-of-the-art transformer models including both encoder-based models such as BERT and a sequence-to-sequence based T5 for joint transfer learning on the two tasks. Based on this approach, we submitted several runs to the track. The returned evaluation results show that our runs substantially outperform other participating runs in both IT classification and priority level prediction.

Stereo Correspondence and Reconstruction of Endoscopic Data Challenge

The stereo correspondence and reconstruction of endoscopic data sub-challenge was organized during the Endovis challenge at MICCAI 2019 in Shenzhen, China. The task was to perform dense depth estimation using 7 training datasets and 2 test sets of structured light data captured using porcine cadavers. These were provided by a team at Intuitive Surgical. 10 teams participated in the challenge day. This paper contains 3 additional methods which were submitted after the challenge finished as well as a supplemental section from these teams on issues they found with the dataset.

AbdomenCT-1K: Is Abdominal Organ Segmentation A Solved Problem?

With the unprecedented developments in deep learning, automatic segmentation of main abdominal organs (i.e., liver, kidney, and spleen) seems to be a solved problem as the state-of-the-art (SOTA) methods have achieved comparable results with inter-observer variability on existing benchmark datasets. However, most of the existing abdominal organ segmentation benchmark datasets only contain single-center, single-phase, single-vendor, or single-disease cases, thus, it is unclear whether the excellent performance can generalize on more diverse datasets. In this paper, we present a large and diverse abdominal CT organ segmentation dataset, termed as AbdomenCT-1K, with more than 1000 (1K) CT scans from 11 countries, including multi-center, multi-phase, multi-vendor, and multi-disease cases. Furthermore, we conduct a large-scale study for liver, kidney, spleen, and pancreas segmentation, as well as reveal the unsolved segmentation problems of the SOTA method, such as the limited generalization ability on distinct medical centers, phases, and unseen diseases. To advance the unsolved problems, we build four organ segmentation benchmarks for fully supervised, semi-supervised, weakly supervised, and continual learning, which are currently challenging and active research topics. Accordingly, we develop a simple and effective method for each benchmark, which can be used as out-of-the-box methods and strong baselines. We believe the introduction of the AbdomenCT-1K dataset will promote future in-depth research towards clinical applicable abdominal organ segmentation methods. Moreover, the datasets, codes, and trained models of baseline methods will be publicly available at https://github.com/JunMa11/AbdomenCT-1K.

UCD-CS at W-NUT 2020 Shared Task-3: A Text to Text Approach for COVID-19 Event Extraction on Social Media

In this paper, we describe our approach in the shared task: COVID-19 event extraction from Twitter. The objective of this task is to extract answers from COVID-related tweets to a set of predefined slot-filling questions. Our approach treats the event extraction task as a question answering task by leveraging the transformer-based T5 text-to-text model. According to the official evaluation scores returned, namely F1, our submitted run achieves competitive performance compared to other participating runs (Top 3). However, we argue that this evaluation may underestimate the actual performance of runs based on text-generation. Although some such runs may answer the slot questions well, they may not be an exact string match for the gold standard answers. To measure the extent of this underestimation, we adopt a simple exact-answer transformation method aiming at converting the well-answered predictions to exactly-matched predictions. The results show that after this transformation our run overall reaches the same level of performance as the best participating run and state-of-the-art F1 scores in three of five COVID-related events. Our code is publicly available to aid reproducibility

Adaptive Context Encoding Module for Semantic Segmentation

The object sizes in images are diverse, therefore, capturing multiple scale context information is essential for semantic segmentation. Existing context aggregation methods such as pyramid pooling module (PPM) and atrous spatial pyramid pooling (ASPP) design different pooling size or atrous rate, such that multiple scale information is captured. However, the pooling sizes and atrous rates are chosen manually and empirically. In order to capture object context information adaptively, in this paper, we propose an adaptive context encoding (ACE) module based on deformable convolution operation to argument multiple scale information. Our ACE module can be embedded into other Convolutional Neural Networks (CNN) easily for context aggregation. The effectiveness of the proposed module is demonstrated on Pascal-Context and ADE20K datasets. Although our proposed ACE only consists of three deformable convolution blocks, it outperforms PPM and ASPP in terms of mean Intersection of Union (mIoU) on both datasets. All the experiment study confirms that our proposed module is effective as compared to the state-of-the-art methods.