Toward Guarantees for Clinical Reasoning in Vision Language Models via Formal Verification

Vision-language models (VLMs) show promise in drafting radiology reports, yet they frequently suffer from logical inconsistencies, generating diagnostic impressions unsupported by their own perceptual findings or missing logically entailed conclusions. Standard lexical metrics heavily penalize clinical paraphrasing and fail to capture these deductive failures in reference-free settings. Toward guarantees for clinical reasoning, we introduce a neurosymbolic verification framework that deterministically audits the internal consistency of VLM-generated reports. Our pipeline autoformalizes free-text radiographic findings into structured propositional evidence, utilizing an SMT solver (Z3) and a clinical knowledge base to verify whether each diagnostic claim is mathematically entailed, hallucinated, or omitted. Evaluating seven VLMs across five chest X-ray benchmarks, our verifier exposes distinct reasoning failure modes, such as conservative observation and stochastic hallucination, that remain invisible to traditional metrics. On labeled datasets, enforcing solver-backed entailment acts as a rigorous post-hoc guarantee, systematically eliminating unsupported hallucinations to significantly increase diagnostic soundness and precision in generative clinical assistants.

Robust Ultra-High-Dimensional Variable Selection With Correlated Structure Using Group Testing

Background: High-dimensional genomic data exhibit strong group correlation structures that challenge conventional feature selection methods, which often assume feature independence or rely on pre-defined pathways and are sensitive to outliers and model misspecification. Methods: We propose the Dorfman screening framework, a multi-stage procedure that forms data-driven variable groups via hierarchical clustering, performs group and within-group hypothesis testing, and refines selection using elastic net or adaptive elastic net. Robust variants incorporate OGK-based covariance estimation, rank-based correlation, and Huber-weighted regression to handle contaminated and non-normal data. Results: In simulations, Dorfman-Sparse-Adaptive-EN performed best under normal conditions, while Robust-OGK-Dorfman-Adaptive-EN showed clear advantages under data contamination, outperforming classical Dorfman and competing methods. Applied to NSCLC gene expression data for trametinib response, robust Dorfman methods achieved the lowest prediction errors and enriched recovery of clinically relevant genes. Conclusions: The Dorfman framework provides an efficient and robust approach to genomic feature selection. Robust-OGK-Dorfman-Adaptive-EN offers strong performance under both ideal and contaminated conditions and scales to ultra-high-dimensional settings, making it well suited for modern genomic biomarker discovery.

Trust The Typical

Current approaches to LLM safety fundamentally rely on a brittle cat-and-mouse game of identifying and blocking known threats via guardrails. We argue for a fresh approach: robust safety comes not from enumerating what is harmful, but from deeply understanding what is safe. We introduce Trust The Typical (T3), a framework that operationalizes this principle by treating safety as an out-of-distribution (OOD) detection problem. T3 learns the distribution of acceptable prompts in a semantic space and flags any significant deviation as a potential threat. Unlike prior methods, it requires no training on harmful examples, yet achieves state-of-the-art performance across 18 benchmarks spanning toxicity, hate speech, jailbreaking, multilingual harms, and over-refusal, reducing false positive rates by up to 40x relative to specialized safety models. A single model trained only on safe English text transfers effectively to diverse domains and over 14 languages without retraining. Finally, we demonstrate production readiness by integrating a GPU-optimized version into vLLM, enabling continuous guardrailing during token generation with less than 6% overhead even under dense evaluation intervals on large-scale workloads.

Context Determines Optimal Architecture in Materials Segmentation

Segmentation architectures are typically benchmarked on single imaging modalities, obscuring deployment-relevant performance variations: an architecture optimal for one modality may underperform on another. We present a cross-modal evaluation framework for materials image segmentation spanning SEM, AFM, XCT, and optical microscopy. Our evaluation of six encoder-decoder combinations across seven datasets reveals that optimal architectures vary systematically by context: UNet excels for high-contrast 2D imaging while DeepLabv3+ is preferred for the hardest cases. The framework also provides deployment feedback via out-of-distribution detection and counterfactual explanations that reveal which microstructural features drive predictions. Together, the architecture guidance, reliability signals, and interpretability tools address a practical gap in materials characterization, where researchers lack tools to select architectures for their specific imaging setup or assess when models can be trusted on new samples.

HugRAG: Hierarchical Causal Knowledge Graph Design for RAG

Retrieval augmented generation (RAG) has enhanced large language models by enabling access to external knowledge, with graph-based RAG emerging as a powerful paradigm for structured retrieval and reasoning. However, existing graph-based methods often over-rely on surface-level node matching and lack explicit causal modeling, leading to unfaithful or spurious answers. Prior attempts to incorporate causality are typically limited to local or single-document contexts and also suffer from information isolation that arises from modular graph structures, which hinders scalability and cross-module causal reasoning. To address these challenges, we propose HugRAG, a framework that rethinks knowledge organization for graph-based RAG through causal gating across hierarchical modules. HugRAG explicitly models causal relationships to suppress spurious correlations while enabling scalable reasoning over large-scale knowledge graphs. Extensive experiments demonstrate that HugRAG consistently outperforms competitive graph-based RAG baselines across multiple datasets and evaluation metrics. Our work establishes a principled foundation for structured, scalable, and causally grounded RAG systems.

When Domains Interact: Asymmetric and Order-Sensitive Cross-Domain Effects in Reinforcement Learning for Reasoning

Group Relative Policy Optimization (GRPO) has become a key technique for improving reasoning abilities in large language models, yet its behavior under different domain sequencing strategies is poorly understood. In particular, the impact of sequential (one domain at a time) versus mixed-domain (multiple domain at a time) training in GRPO has not been systematically studied. We provide the first systematic analysis of training-order effects across math, science, logic, and puzzle reasoning tasks. We found (1) single-domain generalization is highly asymmetric: training on other domains improves math reasoning by approximately 25\% accuracy, while yielding negligible transfer to logic and puzzle; (2) cross-domain interactions are highly order-dependent: training in the order math$\rightarrow$science achieves 83\% / 41\% accuracy on math / science, while reversing the order to science$\rightarrow$math degrades performance to 77\% / 25\%; (3) no single strategy is universally optimal in multi-domain training: sequential training favors math (up to 84\%), mixed training favors science and logic, and poor ordering can incur large performance gaps (from 70\% to 56\%). Overall, our findings demonstrate that GRPO under multi-domain settings exhibits pronounced asymmetry, order sensitivity, and strategy dependence, highlighting the necessity of domain-aware and order-aware training design.

Mid-Think: Training-Free Intermediate-Budget Reasoning via Token-Level Triggers

Hybrid reasoning language models are commonly controlled through high-level Think/No-think instructions to regulate reasoning behavior, yet we found that such mode switching is largely driven by a small set of trigger tokens rather than the instructions themselves. Through attention analysis and controlled prompting experiments, we show that a leading ``Okay'' token induces reasoning behavior, while the newline pattern following ``</think>'' suppresses it. Based on this observation, we propose Mid-Think, a simple training-free prompting format that combines these triggers to achieve intermediate-budget reasoning, consistently outperforming fixed-token and prompt-based baselines in terms of the accuracy-length trade-off. Furthermore, applying Mid-Think to RL training after SFT reduces training time by approximately 15% while improving final performance of Qwen3-8B on AIME from 69.8% to 72.4% and on GPQA from 58.5% to 61.1%, demonstrating its effectiveness for both inference-time control and RL-based reasoning training.

Demystifying Hybrid Thinking: Can LLMs Truly Switch Between Think and No-Think?

Hybrid thinking enables LLMs to switch between reasoning and direct answering, offering a balance between efficiency and reasoning capability. Yet our experiments reveal that current hybrid thinking LLMs only achieve partial mode separation: reasoning behaviors often leak into the no-think mode. To understand and mitigate this, we analyze the factors influencing controllability and identify four that matter most: (1) larger data scale, (2) using think and no-think answers from different questions rather than the same question, (3) a moderate increase in no-think data number, and (4) a two-phase strategy that first trains reasoning ability and then applies hybrid think training. Building on these findings, we propose a practical recipe that, compared to standard training, can maintain accuracy in both modes while significantly reducing no-think output length (from $1085$ to $585$ on MATH500) and occurrences of reasoning-supportive tokens such as ``\texttt{wait}'' (from $5917$ to $522$ on MATH500). Our findings highlight the limitations of current hybrid thinking and offer directions for strengthening its controllability.

Don't Pass$\mathtt{@}k$: A Bayesian Framework for Large Language Model Evaluation

Pass$@k$ is widely used to report performance for LLM reasoning, but it often yields unstable, misleading rankings, especially when the number of trials (samples) is limited and compute is constrained. We present a principled Bayesian evaluation framework that replaces Pass$@k$ and average accuracy over $N$ trials (avg$@N$) with posterior estimates of a model's underlying success probability and credible intervals, yielding stable rankings and a transparent decision rule for differences. Evaluation outcomes are modeled as categorical (not just 0/1) with a Dirichlet prior, giving closed-form expressions for the posterior mean and uncertainty of any weighted rubric and enabling the use of prior evidence when appropriate. Theoretically, under a uniform prior, the Bayesian posterior mean is order-equivalent to average accuracy (Pass$@1$), explaining its empirical robustness while adding principled uncertainty. Empirically, in simulations with known ground-truth success rates and on AIME'24/'25, HMMT'25, and BrUMO'25, the Bayesian/avg procedure achieves faster convergence and greater rank stability than Pass$@k$ and recent variants, enabling reliable comparisons at far smaller sample counts. The framework clarifies when observed gaps are statistically meaningful (non-overlapping credible intervals) versus noise, and it naturally extends to graded, rubric-based evaluations. Together, these results recommend replacing Pass$@k$ for LLM evaluation and ranking with a posterior-based, compute-efficient protocol that unifies binary and non-binary evaluation while making uncertainty explicit. Code is available at https://mohsenhariri.github.io/bayes-kit

LABELING COPILOT: A Deep Research Agent for Automated Data Curation in Computer Vision

Curating high-quality, domain-specific datasets is a major bottleneck for deploying robust vision systems, requiring complex trade-offs between data quality, diversity, and cost when researching vast, unlabeled data lakes. We introduce Labeling Copilot, the first data curation deep research agent for computer vision. A central orchestrator agent, powered by a large multimodal language model, uses multi-step reasoning to execute specialized tools across three core capabilities: (1) Calibrated Discovery sources relevant, in-distribution data from large repositories; (2) Controllable Synthesis generates novel data for rare scenarios with robust filtering; and (3) Consensus Annotation produces accurate labels by orchestrating multiple foundation models via a novel consensus mechanism incorporating non-maximum suppression and voting. Our large-scale validation proves the effectiveness of Labeling Copilot's components. The Consensus Annotation module excels at object discovery: on the dense COCO dataset, it averages 14.2 candidate proposals per image-nearly double the 7.4 ground-truth objects-achieving a final annotation mAP of 37.1%. On the web-scale Open Images dataset, it navigated extreme class imbalance to discover 903 new bounding box categories, expanding its capability to over 1500 total. Concurrently, our Calibrated Discovery tool, tested at a 10-million sample scale, features an active learning strategy that is up to 40x more computationally efficient than alternatives with equivalent sample efficiency. These experiments validate that an agentic workflow with optimized, scalable tools provides a robust foundation for curating industrial-scale datasets.