In the Picture: Medical Imaging Datasets, Artifacts, and their Living Review

Datasets play a critical role in medical imaging research, yet issues such as label quality, shortcuts, and metadata are often overlooked. This lack of attention may harm the generalizability of algorithms and, consequently, negatively impact patient outcomes. While existing medical imaging literature reviews mostly focus on machine learning (ML) methods, with only a few focusing on datasets for specific applications, these reviews remain static -- they are published once and not updated thereafter. This fails to account for emerging evidence, such as biases, shortcuts, and additional annotations that other researchers may contribute after the dataset is published. We refer to these newly discovered findings of datasets as research artifacts. To address this gap, we propose a living review that continuously tracks public datasets and their associated research artifacts across multiple medical imaging applications. Our approach includes a framework for the living review to monitor data documentation artifacts, and an SQL database to visualize the citation relationships between research artifact and dataset. Lastly, we discuss key considerations for creating medical imaging datasets, review best practices for data annotation, discuss the significance of shortcuts and demographic diversity, and emphasize the importance of managing datasets throughout their entire lifecycle. Our demo is publicly available at http://130.226.140.142.

Slicing Through Bias: Explaining Performance Gaps in Medical Image Analysis using Slice Discovery Methods

Machine learning models have achieved high overall accuracy in medical image analysis. However, performance disparities on specific patient groups pose challenges to their clinical utility, safety, and fairness. This can affect known patient groups - such as those based on sex, age, or disease subtype - as well as previously unknown and unlabeled groups. Furthermore, the root cause of such observed performance disparities is often challenging to uncover, hindering mitigation efforts. In this paper, to address these issues, we leverage Slice Discovery Methods (SDMs) to identify interpretable underperforming subsets of data and formulate hypotheses regarding the cause of observed performance disparities. We introduce a novel SDM and apply it in a case study on the classification of pneumothorax and atelectasis from chest x-rays. Our study demonstrates the effectiveness of SDMs in hypothesis formulation and yields an explanation of previously observed but unexplained performance disparities between male and female patients in widely used chest X-ray datasets and models. Our findings indicate shortcut learning in both classification tasks, through the presence of chest drains and ECG wires, respectively. Sex-based differences in the prevalence of these shortcut features appear to cause the observed classification performance gap, representing a previously underappreciated interaction between shortcut learning and model fairness analyses.

Diffusion-based Iterative Counterfactual Explanations for Fetal Ultrasound Image Quality Assessment

Obstetric ultrasound image quality is crucial for accurate diagnosis and monitoring of fetal health. However, producing high-quality standard planes is difficult, influenced by the sonographer's expertise and factors like the maternal BMI or the fetus dynamics. In this work, we propose using diffusion-based counterfactual explainable AI to generate realistic high-quality standard planes from low-quality non-standard ones. Through quantitative and qualitative evaluation, we demonstrate the effectiveness of our method in producing plausible counterfactuals of increased quality. This shows future promise both for enhancing training of clinicians by providing visual feedback, as well as for improving image quality and, consequently, downstream diagnosis and monitoring.

Non-discrimination Criteria for Generative Language Models

Within recent years, generative AI, such as large language models, has undergone rapid development. As these models become increasingly available to the public, concerns arise about perpetuating and amplifying harmful biases in applications. Gender stereotypes can be harmful and limiting for the individuals they target, whether they consist of misrepresentation or discrimination. Recognizing gender bias as a pervasive societal construct, this paper studies how to uncover and quantify the presence of gender biases in generative language models. In particular, we derive generative AI analogues of three well-known non-discrimination criteria from classification, namely independence, separation and sufficiency. To demonstrate these criteria in action, we design prompts for each of the criteria with a focus on occupational gender stereotype, specifically utilizing the medical test to introduce the ground truth in the generative AI context. Our results address the presence of occupational gender bias within such conversational language models.

Shortcut Learning in Medical Image Segmentation

Shortcut learning is a phenomenon where machine learning models prioritize learning simple, potentially misleading cues from data that do not generalize well beyond the training set. While existing research primarily investigates this in the realm of image classification, this study extends the exploration of shortcut learning into medical image segmentation. We demonstrate that clinical annotations such as calipers, and the combination of zero-padded convolutions and center-cropped training sets in the dataset can inadvertently serve as shortcuts, impacting segmentation accuracy. We identify and evaluate the shortcut learning on two different but common medical image segmentation tasks. In addition, we suggest strategies to mitigate the influence of shortcut learning and improve the generalizability of the segmentation models. By uncovering the presence and implications of shortcuts in medical image segmentation, we provide insights and methodologies for evaluating and overcoming this pervasive challenge and call for attention in the community for shortcuts in segmentation.

Fast Diffusion-Based Counterfactuals for Shortcut Removal and Generation

Shortcut learning is when a model -- e.g. a cardiac disease classifier -- exploits correlations between the target label and a spurious shortcut feature, e.g. a pacemaker, to predict the target label based on the shortcut rather than real discriminative features. This is common in medical imaging, where treatment and clinical annotations correlate with disease labels, making them easy shortcuts to predict disease. We propose a novel detection and quantification of the impact of potential shortcut features via a fast diffusion-based counterfactual image generation that can synthetically remove or add shortcuts. Via a novel inpainting-based modification we spatially limit the changes made with no extra inference step, encouraging the removal of spatially constrained shortcut features while ensuring that the shortcut-free counterfactuals preserve their remaining image features to a high degree. Using these, we assess how shortcut features influence model predictions. This is enabled by our second contribution: An efficient diffusion-based counterfactual explanation method with significant inference speed-up at comparable image quality as state-of-the-art. We confirm this on two large chest X-ray datasets, a skin lesion dataset, and CelebA.

An Interpretable and Attention-based Method for Gaze Estimation Using Electroencephalography

Eye movements can reveal valuable insights into various aspects of human mental processes, physical well-being, and actions. Recently, several datasets have been made available that simultaneously record EEG activity and eye movements. This has triggered the development of various methods to predict gaze direction based on brain activity. However, most of these methods lack interpretability, which limits their technology acceptance. In this paper, we leverage a large data set of simultaneously measured Electroencephalography (EEG) and Eye tracking, proposing an interpretable model for gaze estimation from EEG data. More specifically, we present a novel attention-based deep learning framework for EEG signal analysis, which allows the network to focus on the most relevant information in the signal and discard problematic channels. Additionally, we provide a comprehensive evaluation of the presented framework, demonstrating its superiority over current methods in terms of accuracy and robustness. Finally, the study presents visualizations that explain the results of the analysis and highlights the potential of attention mechanism for improving the efficiency and effectiveness of EEG data analysis in a variety of applications.

Are Sex-based Physiological Differences the Cause of Gender Bias for Chest X-ray Diagnosis?

While many studies have assessed the fairness of AI algorithms in the medical field, the causes of differences in prediction performance are often unknown. This lack of knowledge about the causes of bias hampers the efficacy of bias mitigation, as evidenced by the fact that simple dataset balancing still often performs best in reducing performance gaps but is unable to resolve all performance differences. In this work, we investigate the causes of gender bias in machine learning-based chest X-ray diagnosis. In particular, we explore the hypothesis that breast tissue leads to underexposure of the lungs and causes lower model performance. Methodologically, we propose a new sampling method which addresses the highly skewed distribution of recordings per patient in two widely used public datasets, while at the same time reducing the impact of label errors. Our comprehensive analysis of gender differences across diseases, datasets, and gender representations in the training set shows that dataset imbalance is not the sole cause of performance differences. Moreover, relative group performance differs strongly between datasets, indicating important dataset-specific factors influencing male/female group performance. Finally, we investigate the effect of breast tissue more specifically, by cropping out the breasts from recordings, finding that this does not resolve the observed performance gaps. In conclusion, our results indicate that dataset-specific factors, not fundamental physiological differences, are the main drivers of male--female performance gaps in chest X-ray analyses on widely used NIH and CheXpert Dataset.

Will You Ever Become Popular? Learning to Predict Virality of Dance Clips

Dance challenges are going viral in video communities like TikTok nowadays. Once a challenge becomes popular, thousands of short-form videos will be uploaded in merely a couple of days. Therefore, virality prediction from dance challenges is of great commercial value and has a wide range of applications, such as smart recommendation and popularity promotion. In this paper, a novel multi-modal framework which integrates skeletal, holistic appearance, facial and scenic cues is proposed for comprehensive dance virality prediction. To model body movements, we propose a pyramidal skeleton graph convolutional network (PSGCN) which hierarchically refines spatio-temporal skeleton graphs. Meanwhile, we introduce a relational temporal convolutional network (RTCN) to exploit appearance dynamics with non-local temporal relations. An attentive fusion approach is finally proposed to adaptively aggregate predictions from different modalities. To validate our method, we introduce a large-scale viral dance video (VDV) dataset, which contains over 4,000 dance clips of eight viral dance challenges. Extensive experiments on the VDV dataset demonstrate the efficacy of our model. Extensive experiments on the VDV dataset well demonstrate the effectiveness of our approach. Furthermore, we show that short video applications like multi-dimensional recommendation and action feedback can be derived from our model.