Abstract:Blood vessel networks in the brain play a crucial role in stroke research, where understanding their topology is essential for analyzing blood flow dynamics. However, extracting detailed topological vessel network information from microscopy data remains a significant challenge, mainly due to the scarcity of labeled training data and the need for high topological accuracy. This work combines synthetic data generation with deep learning to automatically extract vessel networks as graphs from volumetric microscopy data. To combat data scarcity, we introduce a comprehensive pipeline for generating large-scale synthetic datasets that mirror the characteristics of real vessel networks. Our three-stage approach progresses from abstract graph generation through vessel mask creation to realistic medical image synthesis, incorporating biological constraints and imaging artifacts at each stage. Using this synthetic data, we develop a two-stage deep learning pipeline of 3D U-Net-based models for node detection and edge prediction. Fine-tuning on real microscopy data shows promising adaptation, improving edge prediction F1 scores from 0.496 to 0.626 by training on merely 5 manually labeled samples. These results suggest that automated vessel network extraction is becoming practically feasible, opening new possibilities for large-scale vascular analysis in stroke research.
Abstract:Over the past years, advances in artificial intelligence (AI) have demonstrated how AI can solve many perception and generation tasks, such as image classification and text writing, yet reasoning remains a challenge. This paper introduces the FLIP dataset, a benchmark for evaluating AI reasoning capabilities based on human verification tasks on the Idena blockchain. FLIP challenges present users with two orderings of 4 images, requiring them to identify the logically coherent one. By emphasizing sequential reasoning, visual storytelling, and common sense, FLIP provides a unique testbed for multimodal AI systems. Our experiments evaluate state-of-the-art models, leveraging both vision-language models (VLMs) and large language models (LLMs). Results reveal that even the best open-sourced and closed-sourced models achieve maximum accuracies of 75.5% and 77.9%, respectively, in zero-shot settings, compared to human performance of 95.3%. Captioning models aid reasoning models by providing text descriptions of images, yielding better results than when using the raw images directly, 69.6% vs. 75.2% for Gemini 1.5 Pro. Combining the predictions from 15 models in an ensemble increases the accuracy to 85.2%. These findings highlight the limitations of existing reasoning models and the need for robust multimodal benchmarks like FLIP. The full codebase and dataset will be available at https://github.com/aplesner/FLIP-Reasoning-Challenge.
Abstract:Adversarial attacks on image models threaten system robustness by introducing imperceptible perturbations that cause incorrect predictions. We investigate human-aligned learned lossy compression as a defense mechanism, comparing two learned models (HiFiC and ELIC) against traditional JPEG across various quality levels. Our experiments on ImageNet subsets demonstrate that learned compression methods outperform JPEG, particularly for Vision Transformer architectures, by preserving semantically meaningful content while removing adversarial noise. Even in white-box settings where attackers can access the defense, these methods maintain substantial effectiveness. We also show that sequential compression--applying rounds of compression/decompression--significantly enhances defense efficacy while maintaining classification performance. Our findings reveal that human-aligned compression provides an effective, computationally efficient defense that protects the image features most relevant to human and machine understanding. It offers a practical approach to improving model robustness against adversarial threats.
Abstract:The rise of reinforcement learning (RL) in critical real-world applications demands a fundamental rethinking of privacy in AI systems. Traditional privacy frameworks, designed to protect isolated data points, fall short for sequential decision-making systems where sensitive information emerges from temporal patterns, behavioral strategies, and collaborative dynamics. Modern RL paradigms, such as federated RL (FedRL) and RL with human feedback (RLHF) in large language models (LLMs), exacerbate these challenges by introducing complex, interactive, and context-dependent learning environments that traditional methods do not address. In this position paper, we argue for a new privacy paradigm built on four core principles: multi-scale protection, behavioral pattern protection, collaborative privacy preservation, and context-aware adaptation. These principles expose inherent tensions between privacy, utility, and interpretability that must be navigated as RL systems become more pervasive in high-stakes domains like healthcare, autonomous vehicles, and decision support systems powered by LLMs. To tackle these challenges, we call for the development of new theoretical frameworks, practical mechanisms, and rigorous evaluation methodologies that collectively enable effective privacy protection in sequential decision-making systems.
Abstract:Large Language Models (LLMs) have demonstrated remarkable text generation capabilities, and recent advances in training paradigms have led to breakthroughs in their reasoning performance. In this work, we investigate how the reasoning effort of such models scales with problem complexity. We use the infinitely scalable Tents puzzle, which has a known linear-time solution, to analyze this scaling behavior. Our results show that reasoning effort scales with problem size, but only up to a critical problem complexity. Beyond this threshold, the reasoning effort does not continue to increase, and may even decrease. This observation highlights a critical limitation in the logical coherence of current LLMs as problem complexity increases, and underscores the need for strategies to improve reasoning scalability. Furthermore, our results reveal significant performance differences between current state-of-the-art reasoning models when faced with increasingly complex logical puzzles.
Abstract:We challenge the prevailing assumption that LLMs must rely fully on sub-word tokens for high-quality text generation. To this end, we propose the "Generative Pretrained Thoughtformer" (GPTHF), a hierarchical transformer language model capable of text generation by compressing text into sentence embeddings and employing a sentence attention mechanism. GPTHF retains GPT's architecture, modifying only token interactions via dynamic sparse attention masks. Our experiments show that GPTHF achieves an up to an order of magnitude improvement in FLOPs efficiency and a threefold increase in runtime speed compared to equally-sized GPT models in the low-size regime. This is achieved through a unique generation method that caches and reuses sentence embeddings, allowing significant portions of the input to bypass large parts of the network.
Abstract:This work presents a first evaluation of two state-of-the-art Large Reasoning Models (LRMs), OpenAI's o3-mini and DeepSeek R1, on analogical reasoning, focusing on well-established nonverbal human IQ tests based on Raven's progressive matrices. We benchmark with the I-RAVEN dataset and its more difficult extension, I-RAVEN-X, which tests the ability to generalize to longer reasoning rules and ranges of the attribute values. To assess the influence of visual uncertainties on these nonverbal analogical reasoning tests, we extend the I-RAVEN-X dataset, which otherwise assumes an oracle perception. We adopt a two-fold strategy to simulate this imperfect visual perception: 1) we introduce confounding attributes which, being sampled at random, do not contribute to the prediction of the correct answer of the puzzles and 2) smoothen the distributions of the input attributes' values. We observe a sharp decline in OpenAI's o3-mini task accuracy, dropping from 86.6% on the original I-RAVEN to just 17.0% -- approaching random chance -- on the more challenging I-RAVEN-X, which increases input length and range and emulates perceptual uncertainty. This drop occurred despite spending 3.4x more reasoning tokens. A similar trend is also observed for DeepSeek R1: from 80.6% to 23.2%. On the other hand, a neuro-symbolic probabilistic abductive model, ARLC, that achieves state-of-the-art performances on I-RAVEN, can robustly reason under all these out-of-distribution tests, maintaining strong accuracy with only a modest reduction from 98.6% to 88.0%. Our code is available at https://github.com/IBM/raven-large-language-models.
Abstract:While neural vocoders have made significant progress in high-fidelity speech synthesis, their application on polyphonic music has remained underexplored. In this work, we propose DisCoder, a neural vocoder that leverages a generative adversarial encoder-decoder architecture informed by a neural audio codec to reconstruct high-fidelity 44.1 kHz audio from mel spectrograms. Our approach first transforms the mel spectrogram into a lower-dimensional representation aligned with the Descript Audio Codec (DAC) latent space before reconstructing it to an audio signal using a fine-tuned DAC decoder. DisCoder achieves state-of-the-art performance in music synthesis on several objective metrics and in a MUSHRA listening study. Our approach also shows competitive performance in speech synthesis, highlighting its potential as a universal vocoder.
Abstract:Despite incredible progress, many neural architectures fail to properly generalize beyond their training distribution. As such, learning to reason in a correct and generalizable way is one of the current fundamental challenges in machine learning. In this respect, logic puzzles provide a great testbed, as we can fully understand and control the learning environment. Thus, they allow to evaluate performance on previously unseen, larger and more difficult puzzles that follow the same underlying rules. Since traditional approaches often struggle to represent such scalable logical structures, we propose to model these puzzles using a graph-based approach. Then, we investigate the key factors enabling the proposed models to learn generalizable solutions in a reinforcement learning setting. Our study focuses on the impact of the inductive bias of the architecture, different reward systems and the role of recurrent modeling in enabling sequential reasoning. Through extensive experiments, we demonstrate how these elements contribute to successful extrapolation on increasingly complex puzzles.These insights and frameworks offer a systematic way to design learning-based systems capable of generalizable reasoning beyond interpolation.
Abstract:We are given a set of elements in a metric space. The distribution of the elements is arbitrary, possibly adversarial. Can we weigh the elements in a way that is resistant to such (adversarial) manipulations? This problem arises in various contexts. For instance, the elements could represent data points, requiring robust domain adaptation. Alternatively, they might represent tasks to be aggregated into a benchmark; or questions about personal political opinions in voting advice applications. This article introduces a theoretical framework for dealing with such problems. We propose clone-proof representation functions as a solution concept. These functions distribute importance across elements of a set such that similar objects (``clones'') share (some of) their weights, thus avoiding a potential bias introduced by their multiplicity. Our framework extends the maximum uncertainty principle to accommodate general metric spaces and includes a set of axioms - symmetry, continuity, and clone-proofness - that guide the construction of representation functions. Finally, we address the existence of representation functions satisfying our axioms in the significant case of Euclidean spaces and propose a general method for their construction.