Unsupervised Detection of Fetal Brain Anomalies using Denoising Diffusion Models

Congenital malformations of the brain are among the most common fetal abnormalities that impact fetal development. Previous anomaly detection methods on ultrasound images are based on supervised learning, rely on manual annotations, and risk missing underrepresented categories. In this work, we frame fetal brain anomaly detection as an unsupervised task using diffusion models. To this end, we employ an inpainting-based Noise Agnostic Anomaly Detection approach that identifies the abnormality using diffusion-reconstructed fetal brain images from multiple noise levels. Our approach only requires normal fetal brain ultrasound images for training, addressing the limited availability of abnormal data. Our experiments on a real-world clinical dataset show the potential of using unsupervised methods for fetal brain anomaly detection. Additionally, we comprehensively evaluate how different noise types affect diffusion models in the fetal anomaly detection domain.

Deployment of Deep Learning Model in Real World Clinical Setting: A Case Study in Obstetric Ultrasound

Despite the rapid development of AI models in medical image analysis, their validation in real-world clinical settings remains limited. To address this, we introduce a generic framework designed for deploying image-based AI models in such settings. Using this framework, we deployed a trained model for fetal ultrasound standard plane detection, and evaluated it in real-time sessions with both novice and expert users. Feedback from these sessions revealed that while the model offers potential benefits to medical practitioners, the need for navigational guidance was identified as a key area for improvement. These findings underscore the importance of early deployment of AI models in real-world settings, leading to insights that can guide the refinement of the model and system based on actual user feedback.

Diffusion-based Iterative Counterfactual Explanations for Fetal Ultrasound Image Quality Assessment

Obstetric ultrasound image quality is crucial for accurate diagnosis and monitoring of fetal health. However, producing high-quality standard planes is difficult, influenced by the sonographer's expertise and factors like the maternal BMI or the fetus dynamics. In this work, we propose using diffusion-based counterfactual explainable AI to generate realistic high-quality standard planes from low-quality non-standard ones. Through quantitative and qualitative evaluation, we demonstrate the effectiveness of our method in producing plausible counterfactuals of increased quality. This shows future promise both for enhancing training of clinicians by providing visual feedback, as well as for improving image quality and, consequently, downstream diagnosis and monitoring.

Shortcut Learning in Medical Image Segmentation

Shortcut learning is a phenomenon where machine learning models prioritize learning simple, potentially misleading cues from data that do not generalize well beyond the training set. While existing research primarily investigates this in the realm of image classification, this study extends the exploration of shortcut learning into medical image segmentation. We demonstrate that clinical annotations such as calipers, and the combination of zero-padded convolutions and center-cropped training sets in the dataset can inadvertently serve as shortcuts, impacting segmentation accuracy. We identify and evaluate the shortcut learning on two different but common medical image segmentation tasks. In addition, we suggest strategies to mitigate the influence of shortcut learning and improve the generalizability of the segmentation models. By uncovering the presence and implications of shortcuts in medical image segmentation, we provide insights and methodologies for evaluating and overcoming this pervasive challenge and call for attention in the community for shortcuts in segmentation.

Learning semantic image quality for fetal ultrasound from noisy ranking annotation

We introduce the notion of semantic image quality for applications where image quality relies on semantic requirements. Working in fetal ultrasound, where ranking is challenging and annotations are noisy, we design a robust coarse-to-fine model that ranks images based on their semantic image quality and endow our predicted rankings with an uncertainty estimate. To annotate rankings on training data, we design an efficient ranking annotation scheme based on the merge sort algorithm. Finally, we compare our ranking algorithm to a number of state-of-the-art ranking algorithms on a challenging fetal ultrasound quality assessment task, showing the superior performance of our method on the majority of rank correlation metrics.

An Automatic Guidance and Quality Assessment System for Doppler Imaging of Umbilical Artery

In fetal ultrasound screening, Doppler images on the umbilical artery (UA) are important for monitoring blood supply through the umbilical cord. However, to capture UA Doppler images, a number of steps need to be done correctly: placing the gate at a proper location in the ultrasound image to obtain blood flow waveforms, and judging the Doppler waveform quality. Both of these rely on the operator's experience. The shortage of experienced sonographers thus creates a demand for machine assistance. We propose an automatic system to fill this gap. Using a modified Faster R-CNN we obtain an algorithm that suggests Doppler flow gate locations. We subsequently assess the Doppler waveform quality. We validate the proposed system on 657 scans from a national ultrasound screening database. The experimental results demonstrate that our system is useful in guiding operators for UA Doppler image capture and quality assessment.

Removing confounding information from fetal ultrasound images

Confounding information in the form of text or markings embedded in medical images can severely affect the training of diagnostic deep learning algorithms. However, data collected for clinical purposes often have such markings embedded in them. In dermatology, known examples include drawings or rulers that are overrepresented in images of malignant lesions. In this paper, we encounter text and calipers placed on the images found in national databases containing fetal screening ultrasound scans, which correlate with standard planes to be predicted. In order to utilize the vast amounts of data available in these databases, we develop and validate a series of methods for minimizing the confounding effects of embedded text and calipers on deep learning algorithms designed for ultrasound, using standard plane classification as a test case.