BEACON: A Benchmark for Efficient and Accurate Counting of Subgraphs

Subgraph counting the task of determining the number of instances of a query pattern within a large graph lies at the heart of many critical applications, from analyzing financial networks and transportation systems to understanding biological interactions. Despite decades of work yielding efficient algorithmic (AL) solutions and, more recently, machine learning (ML) approaches, a clear comparative understanding is elusive. This gap stems from the absence of a unified evaluation framework, standardized datasets, and accessible ground truths, all of which hinder systematic analysis and fair benchmarking. To overcome these barriers, we introduce BEACON: a comprehensive benchmark designed to rigorously evaluate both AL and ML-based subgraph counting methods. BEACON provides a standardized dataset with verified ground truths, an integrated evaluation environment, and a public leaderboard, enabling reproducible and transparent comparisons across diverse approaches. Our extensive experiments reveal that while AL methods excel in efficiently counting subgraphs on very large graphs, they struggle with complex patterns (e.g., those exceeding six nodes). In contrast, ML methods are capable of handling larger patterns but demand massive graph data inputs and often yield suboptimal accuracy on small, dense graphs. These insights not only highlight the unique strengths and limitations of each approach but also pave the way for future advancements in subgraph counting techniques. Overall, BEACON represents a significant step towards unifying and accelerating research in subgraph counting, encouraging innovative solutions and fostering a deeper understanding of the trade-offs between algorithmic and machine learning paradigms.

TRACE: Intra-visit Clinical Event Nowcasting via Effective Patient Trajectory Encoding

Electronic Health Records (EHR) have become a valuable resource for a wide range of predictive tasks in healthcare. However, existing approaches have largely focused on inter-visit event predictions, overlooking the importance of intra-visit nowcasting, which provides prompt clinical insights during an ongoing patient visit. To address this gap, we introduce the task of laboratory measurement prediction within a hospital visit. We study the laboratory data that, however, remained underexplored in previous work. We propose TRACE, a Transformer-based model designed for clinical event nowcasting by encoding patient trajectories. TRACE effectively handles long sequences and captures temporal dependencies through a novel timestamp embedding that integrates decay properties and periodic patterns of data. Additionally, we introduce a smoothed mask for denoising, improving the robustness of the model. Experiments on two large-scale electronic health record datasets demonstrate that the proposed model significantly outperforms previous methods, highlighting its potential for improving patient care through more accurate laboratory measurement nowcasting. The code is available at https://github.com/Amehi/TRACE.

On Aggregation Queries over Predicted Nearest Neighbors

We introduce Aggregation Queries over Nearest Neighbors (AQNNs), a novel type of aggregation queries over the predicted neighborhood of a designated object. AQNNs are prevalent in modern applications where, for instance, a medical professional may want to compute "the average systolic blood pressure of patients whose predicted condition is similar to a given insomnia patient". Since prediction typically involves an expensive deep learning model or a human expert, we formulate query processing as the problem of returning an approximate aggregate by combining an expensive oracle and a cheaper model (e.g, a simple ML model) to compute the predictions. We design the Sampler with Precision-Recall in Target (SPRinT) framework for answering AQNNs. SPRinT consists of sampling, nearest neighbor refinement, and aggregation, and is tailored for various aggregation functions. It enjoys provable theoretical guarantees, including bounds on sample size and on error in approximate aggregates. Our extensive experiments on medical, e-commerce, and video datasets demonstrate that SPRinT consistently achieves the lowest aggregation error with minimal computation cost compared to its baselines. Scalability results show that SPRinT's execution time and aggregation error remain stable as the dataset size increases, confirming its suitability for large-scale applications.

Cross-Modal Consistency in Multimodal Large Language Models

Recent developments in multimodal methodologies have marked the beginning of an exciting era for models adept at processing diverse data types, encompassing text, audio, and visual content. Models like GPT-4V, which merge computer vision with advanced language processing, exhibit extraordinary proficiency in handling intricate tasks that require a simultaneous understanding of both textual and visual information. Prior research efforts have meticulously evaluated the efficacy of these Vision Large Language Models (VLLMs) in various domains, including object detection, image captioning, and other related fields. However, existing analyses have often suffered from limitations, primarily centering on the isolated evaluation of each modality's performance while neglecting to explore their intricate cross-modal interactions. Specifically, the question of whether these models achieve the same level of accuracy when confronted with identical task instances across different modalities remains unanswered. In this study, we take the initiative to delve into the interaction and comparison among these modalities of interest by introducing a novel concept termed cross-modal consistency. Furthermore, we propose a quantitative evaluation framework founded on this concept. Our experimental findings, drawn from a curated collection of parallel vision-language datasets developed by us, unveil a pronounced inconsistency between the vision and language modalities within GPT-4V, despite its portrayal as a unified multimodal model. Our research yields insights into the appropriate utilization of such models and hints at potential avenues for enhancing their design.

Autoregressive + Chain of Thought = Recurrent: Recurrence's Role in Language Models' Computability and a Revisit of Recurrent Transformer

The Transformer architecture excels in a variety of language modeling tasks, outperforming traditional neural architectures such as RNN and LSTM. This is partially due to its elimination of recurrent connections, which allows for parallel training and a smoother flow of gradients. However, this move away from recurrent structures places the Transformer model at the lower end of Chomsky's computational hierarchy, imposing limitations on its computational abilities. Consequently, even advanced Transformer-based models face considerable difficulties in tasks like counting, string reversal, and multiplication. These tasks, though seemingly elementary, require a level of computational complexity that exceeds the capabilities of the Transformer architecture. Concurrently, the emergence of ``Chain of Thought" (CoT) prompting has enabled Transformer-based language models to tackle tasks that were previously impossible or poorly executed. In this work, we thoroughly investigate the influence of recurrent structures in neural models on their reasoning abilities and computability, contrasting the role autoregression plays in the neural models' computational power. We then shed light on how the CoT approach can mimic recurrent computation and act as a bridge between autoregression and recurrence in the context of language models. It is this approximated recurrence that notably improves the model's performance and computational capacity. Moreover, we revisit recent recurrent-based Transformer model designs, focusing on their computational abilities through our proposed concept of ``recurrence-completeness" and identify key theoretical limitations in models like Linear Transformer and RWKV. Through this, we aim to provide insight into the neural model architectures and prompt better model design.

Autoregressive + Chain of Thought (CoT) $\simeq$ Recurrent: Recurrence's Role in Language Models and a Revist of Recurrent Transformer

The Transformer architecture excels in a variety of language modeling tasks, outperforming traditional neural architectures such as RNN and LSTM. This is partially due to its elimination of recurrent connections, which allows for parallel training and a smoother flow of gradients. However, this move away from recurrent structures places the Transformer model at the lower end of Chomsky's computational hierarchy, imposing limitations on its computational abilities. Consequently, even advanced Transformer-based models face considerable difficulties in tasks like counting, string reversal, bracket pairing, and multiplication. These tasks, though seemingly elementary, require a level of computational complexity that exceeds the capabilities of the Transformer architecture. Concurrently, the emergence of ``Chain of Thought" (CoT) prompting has enabled Transformer-based language models to tackle tasks that were previously impossible or poorly executed. Despite some previous research primarily interpreting CoT from a psychological perspective, a comprehensive understanding of \textit{why} CoT proves so effective in the reasoning process remains elusive. In this work, we thoroughly investigate the influence of recurrent structures in language models on their reasoning abilities, shedding light on how the CoT approach can mimic recurrent computation and act as a bridge between autoregression and recurrence. It is this approximated recurrence that notably improves the model's performance and computational capacity. Moreover, we revisit recent recurrent-based Transformer model designs, focusing on their computational abilities through our proposed concept of ``recurrence-completeness" and identify key theoretical limitations in models like Linear Transformer and RWKV. Through this, we aim to provide insight into the neural model architectures and prompt better model design.

Benchmarking Spectral Graph Neural Networks: A Comprehensive Study on Effectiveness and Efficiency

With the recent advancements in graph neural networks (GNNs), spectral GNNs have received increasing popularity by virtue of their specialty in capturing graph signals in the frequency domain, demonstrating promising capability in specific tasks. However, few systematic studies have been conducted on assessing their spectral characteristics. This emerging family of models also varies in terms of designs and settings, leading to difficulties in comparing their performance and deciding on the suitable model for specific scenarios, especially for large-scale tasks. In this work, we extensively benchmark spectral GNNs with a focus on the frequency perspective. We analyze and categorize over 30 GNNs with 27 corresponding filters. Then, we implement these spectral models under a unified framework with dedicated graph computations and efficient training schemes. Thorough experiments are conducted on the spectral models with inclusive metrics on effectiveness and efficiency, offering practical guidelines on evaluating and selecting spectral GNNs with desirable performance. Our implementation enables application on larger graphs with comparable performance and less overhead, which is available at: https://github.com/gdmnl/Spectral-GNN-Benchmark.

Predicting Cascading Failures with a Hyperparametric Diffusion Model

In this paper, we study cascading failures in power grids through the lens of information diffusion models. Similar to the spread of rumors or influence in an online social network, it has been observed that failures (outages) in a power grid can spread contagiously, driven by viral spread mechanisms. We employ a stochastic diffusion model that is Markovian (memoryless) and local (the activation of one node, i.e., transmission line, can only be caused by its neighbors). Our model integrates viral diffusion principles with physics-based concepts, by correlating the diffusion weights (contagion probabilities between transmission lines) with the hyperparametric Information Cascades (IC) model. We show that this diffusion model can be learned from traces of cascading failures, enabling accurate modeling and prediction of failure propagation. This approach facilitates actionable information through well-understood and efficient graph analysis methods and graph diffusion simulations. Furthermore, by leveraging the hyperparametric model, we can predict diffusion and mitigate the risks of cascading failures even in unseen grid configurations, whereas existing methods falter due to a lack of training data. Extensive experiments based on a benchmark power grid and simulations therein show that our approach effectively captures the failure diffusion phenomena and guides decisions to strengthen the grid, reducing the risk of large-scale cascading failures. Additionally, we characterize our model's sample complexity, improving upon the existing bound.

OCCAM: Towards Cost-Efficient and Accuracy-Aware Image Classification Inference

Image classification is a fundamental building block for a majority of computer vision applications. With the growing popularity and capacity of machine learning models, people can easily access trained image classifiers as a service online or offline. However, model use comes with a cost and classifiers of higher capacity usually incur higher inference costs. To harness the respective strengths of different classifiers, we propose a principled approach, OCCAM, to compute the best classifier assignment strategy over image classification queries (termed as the optimal model portfolio) so that the aggregated accuracy is maximized, under user-specified cost budgets. Our approach uses an unbiased and low-variance accuracy estimator and effectively computes the optimal solution by solving an integer linear programming problem. On a variety of real-world datasets, OCCAM achieves 40% cost reduction with little to no accuracy drop.

Hybrid LLM: Cost-Efficient and Quality-Aware Query Routing

Large language models (LLMs) excel in most NLP tasks but also require expensive cloud servers for deployment due to their size, while smaller models that can be deployed on lower cost (e.g., edge) devices, tend to lag behind in terms of response quality. Therefore in this work we propose a hybrid inference approach which combines their respective strengths to save cost and maintain quality. Our approach uses a router that assigns queries to the small or large model based on the predicted query difficulty and the desired quality level. The desired quality level can be tuned dynamically at test time to seamlessly trade quality for cost as per the scenario requirements. In experiments our approach allows us to make up to 40% fewer calls to the large model, with no drop in response quality.