Abstract:Passive acoustic mapping (PAM) is a promising tool for monitoring acoustic cavitation activities in the applications of ultrasound therapy. Data-adaptive beamformers for PAM have better image quality compared to the time exposure acoustics (TEA) algorithms. However, the computational cost of data-adaptive beamformers is considerably expensive. In this work, we develop a deep beamformer based on a generative adversarial network, which can switch between different transducer arrays and reconstruct high-quality PAM images directly from radio frequency ultrasound signals with low computational cost. The deep beamformer was trained on the dataset consisting of simulated and experimental cavitation signals of single and multiple microbubble clouds measured by different (linear and phased) arrays covering 1-15 MHz. We compared the performance of the deep beamformer to TEA and three different data-adaptive beamformers using the simulated and experimental test dataset. Compared with TEA, the deep beamformer reduced the energy spread area by 18.9%-65.0% and improved the image signal-to-noise ratio by 9.3-22.9 dB in average for the different arrays in our data. Compared to the data-adaptive beamformers, the deep beamformer reduced the computational cost by three orders of magnitude achieving 10.5 ms image reconstruction speed in our data, while the image quality was as good as that of the data-adaptive beamformers. These results demonstrated the potential of the deep beamformer for high-resolution monitoring of microbubble cavitation activities for ultrasound therapy.
Abstract:In the diverse field of medical imaging, automatic segmentation has numerous applications and must handle a wide variety of input domains, such as different types of Computed Tomography (CT) scans and Magnetic Resonance (MR) images. This heterogeneity challenges automatic segmentation algorithms to maintain consistent performance across different modalities due to the requirement for spatially aligned and paired images. Typically, segmentation models are trained using a single modality, which limits their ability to generalize to other types of input data without employing transfer learning techniques. Additionally, leveraging complementary information from different modalities to enhance segmentation precision often necessitates substantial modifications to popular encoder-decoder designs, such as introducing multiple branched encoding or decoding paths for each modality. In this work, we propose a simple Multi-Modal Segmentation (MulModSeg) strategy to enhance medical image segmentation across multiple modalities, specifically CT and MR. It incorporates two key designs: a modality-conditioned text embedding framework via a frozen text encoder that adds modality awareness to existing segmentation frameworks without significant structural modifications or computational overhead, and an alternating training procedure that facilitates the integration of essential features from unpaired CT and MR inputs. Through extensive experiments with both Fully Convolutional Network and Transformer-based backbones, MulModSeg consistently outperforms previous methods in segmenting abdominal multi-organ and cardiac substructures for both CT and MR modalities. The code is available in this {\href{https://github.com/ChengyinLee/MulModSeg_2024}{link}}.
Abstract:Recently, an intriguing research trend for automatic target recognition (ATR) from synthetic aperture radar (SAR) imagery has arisen: using simulated data to train ATR models is a feasible solution to the issue of inadequate measured data. To close the domain gap that exists between the real and simulated data, the unsupervised domain adaptation (UDA) techniques are frequently exploited to construct ATR models. However, for UDA, the target domain lacks labeled data to direct the model training, posing a great challenge to ATR performance. To address the above problem, a semi-supervised domain adaptation (SSDA) framework has been proposed adopting progressive multi-level alignments for simulated data-aided SAR ATR. First, a progressive wavelet transform data augmentation (PWTDA) is presented by analyzing the discrepancies of wavelet decomposition sub-bands of two domain images, obtaining the domain-level alignment. Specifically, the domain gap is narrowed by mixing the wavelet transform high-frequency sub-band components. Second, we develop an asymptotic instance-prototype alignment (AIPA) strategy to push the source domain instances close to the corresponding target prototypes, aiming to achieve category-level alignment. Moreover, the consistency alignment is implemented by excavating the strong-weak augmentation consistency of both individual samples and the multi-sample relationship, enhancing the generalization capability of the model. Extensive experiments on the Synthetic and Measured Paired Labeled Experiment (SAMPLE) dataset, indicate that our approach obtains recognition accuracies of 99.63% and 98.91% in two common experimental settings with only one labeled sample per class of the target domain, outperforming the most advanced SSDA techniques.
Abstract:The Segment Anything Model (SAM) has shown impressive performance when applied to natural image segmentation. However, it struggles with geographical images like aerial and satellite imagery, especially when segmenting mobility infrastructure including roads, sidewalks, and crosswalks. This inferior performance stems from the narrow features of these objects, their textures blending into the surroundings, and interference from objects like trees, buildings, vehicles, and pedestrians - all of which can disorient the model to produce inaccurate segmentation maps. To address these challenges, we propose Geographical SAM (GeoSAM), a novel SAM-based framework that implements a fine-tuning strategy using the dense visual prompt from zero-shot learning, and the sparse visual prompt from a pre-trained CNN segmentation model. The proposed GeoSAM outperforms existing approaches for geographical image segmentation, specifically by 20%, 14.29%, and 17.65% for road infrastructure, pedestrian infrastructure, and on average, respectively, representing a momentous leap in leveraging foundation models to segment mobility infrastructure including both road and pedestrian infrastructure in geographical images.
Abstract:Solving variational image segmentation problems with hidden physics is often expensive and requires different algorithms and manually tunes model parameter. The deep learning methods based on the U-Net structure have obtained outstanding performances in many different medical image segmentation tasks, but designing such networks requires a lot of parameters and training data, not always available for practical problems. In this paper, inspired by traditional multi-phase convexity Mumford-Shah variational model and full approximation scheme (FAS) solving the nonlinear systems, we propose a novel variational-model-informed network (denoted as FAS-Unet) that exploits the model and algorithm priors to extract the multi-scale features. The proposed model-informed network integrates image data and mathematical models, and implements them through learning a few convolution kernels. Based on the variational theory and FAS algorithm, we first design a feature extraction sub-network (FAS-Solution module) to solve the model-driven nonlinear systems, where a skip-connection is employed to fuse the multi-scale features. Secondly, we further design a convolution block to fuse the extracted features from the previous stage, resulting in the final segmentation possibility. Experimental results on three different medical image segmentation tasks show that the proposed FAS-Unet is very competitive with other state-of-the-art methods in qualitative, quantitative and model complexity evaluations. Moreover, it may also be possible to train specialized network architectures that automatically satisfy some of the mathematical and physical laws in other image problems for better accuracy, faster training and improved generalization.The code is available at \url{https://github.com/zhuhui100/FASUNet}.
Abstract:Automated social behaviour analysis of mice has become an increasingly popular research area in behavioural neuroscience. Recently, pose information (i.e., locations of keypoints or skeleton) has been used to interpret social behaviours of mice. Nevertheless, effective encoding and decoding of social interaction information underlying the keypoints of mice has been rarely investigated in the existing methods. In particular, it is challenging to model complex social interactions between mice due to highly deformable body shapes and ambiguous movement patterns. To deal with the interaction modelling problem, we here propose a Cross-Skeleton Interaction Graph Aggregation Network (CS-IGANet) to learn abundant dynamics of freely interacting mice, where a Cross-Skeleton Node-level Interaction module (CS-NLI) is used to model multi-level interactions (i.e., intra-, inter- and cross-skeleton interactions). Furthermore, we design a novel Interaction-Aware Transformer (IAT) to dynamically learn the graph-level representation of social behaviours and update the node-level representation, guided by our proposed interaction-aware self-attention mechanism. Finally, to enhance the representation ability of our model, an auxiliary self-supervised learning task is proposed for measuring the similarity between cross-skeleton nodes. Experimental results on the standard CRMI13-Skeleton and our PDMB-Skeleton datasets show that our proposed model outperforms several other state-of-the-art approaches.
Abstract:With the development of intelligent vehicle systems, a high-precision road map is increasingly needed in many aspects. The automatic lane lines extraction and modeling are the most essential steps for the generation of a precise lane-level road map. In this paper, an automatic lane-level road map generation system is proposed. To extract the road markings on the ground, the multi-region Otsu thresholding method is applied, which calculates the intensity value of laser data that maximizes the variance between background and road markings. The extracted road marking points are then projected to the raster image and clustered using a two-stage clustering algorithm. Lane lines are subsequently recognized from these clusters by the shape features of their minimum bounding rectangle. To ensure the storage efficiency of the map, the lane lines are approximated to cubic polynomial curves using a Bayesian estimation approach. The proposed lane-level road map generation system has been tested on urban and expressway conditions in Hefei, China. The experimental results on the datasets show that our method can achieve excellent extraction and clustering effect, and the fitted lines can reach a high position accuracy with an error of less than 10 cm
Abstract:Dropout regularization has been widely used in deep learning but performs less effective for convolutional neural networks since the spatially correlated features allow dropped information to still flow through the networks. Some structured forms of dropout have been proposed to address this but prone to result in over or under regularization as features are dropped randomly. In this paper, we propose a targeted regularization method named TargetDrop which incorporates the attention mechanism to drop the discriminative feature units. Specifically, it masks out the target regions of the feature maps corresponding to the target channels. Experimental results compared with the other methods or applied for different networks demonstrate the regularization effect of our method.
Abstract:Existing Online Knowledge Distillation (OKD) aims to perform collaborative and mutual learning among multiple peer networks in terms of probabilistic outputs, but ignores the representational knowledge. We thus introduce Multi-view Contrastive Learning (MCL) for OKD to implicitly capture correlations of representations encoded by multiple peer networks, which provide various views for understanding the input data samples. Contrastive loss is applied for maximizing the consensus of positive data pairs, while pushing negative data pairs apart in embedding space among various views. Benefit from MCL, we can learn a more discriminative representation for classification than previous OKD methods. Experimental results on image classification and few-shot learning demonstrate that our MCL-OKD outperforms other state-of-the-art methods of both OKD and KD by large margins without sacrificing additional inference cost.
Abstract:Public intelligent services enabled by machine learning algorithms are vulnerable to model extraction attacks that can steal confidential information of the learning models through public queries. Differential privacy (DP) has been considered a promising technique to mitigate this attack. However, we find that the vulnerability persists when regression models are being protected by current DP solutions. We show that the adversary can launch a query-flooding parameter duplication (QPD) attack to infer the model information by repeated queries. To defend against the QPD attack on logistic and linear regression models, we propose a novel High-Dimensional Gaussian (HDG) mechanism to prevent unauthorized information disclosure without interrupting the intended services. In contrast to prior work, the proposed HDG mechanism will dynamically generate the privacy budget and random noise for different queries and their results to enhance the obfuscation. Besides, for the first time, HDG enables an optimal privacy budget allocation that automatically determines the minimum amount of noise to be added per user-desired privacy level on each dimension. We comprehensively evaluate the performance of HDG using real-world datasets and shows that HDG effectively mitigates the QPD attack while satisfying the privacy requirements. We also prepare to open-source the relevant codes to the community for further research.