Explainable AI Methods for Multi-Omics Analysis: A Survey

Advancements in high-throughput technologies have led to a shift from traditional hypothesis-driven methodologies to data-driven approaches. Multi-omics refers to the integrative analysis of data derived from multiple 'omes', such as genomics, proteomics, transcriptomics, metabolomics, and microbiomics. This approach enables a comprehensive understanding of biological systems by capturing different layers of biological information. Deep learning methods are increasingly utilized to integrate multi-omics data, offering insights into molecular interactions and enhancing research into complex diseases. However, these models, with their numerous interconnected layers and nonlinear relationships, often function as black boxes, lacking transparency in decision-making processes. To overcome this challenge, explainable artificial intelligence (xAI) methods are crucial for creating transparent models that allow clinicians to interpret and work with complex data more effectively. This review explores how xAI can improve the interpretability of deep learning models in multi-omics research, highlighting its potential to provide clinicians with clear insights, thereby facilitating the effective application of such models in clinical settings.

ALMRR: Anomaly Localization Mamba on Industrial Textured Surface with Feature Reconstruction and Refinement

Unsupervised anomaly localization on industrial textured images has achieved remarkable results through reconstruction-based methods, yet existing approaches based on image reconstruction and feature reconstruc-tion each have their own shortcomings. Firstly, image-based methods tend to reconstruct both normal and anomalous regions well, which lead to over-generalization. Feature-based methods contain a large amount of distin-guishable semantic information, however, its feature structure is redundant and lacks anomalous information, which leads to significant reconstruction errors. In this paper, we propose an Anomaly Localization method based on Mamba with Feature Reconstruction and Refinement(ALMRR) which re-constructs semantic features based on Mamba and then refines them through a feature refinement module. To equip the model with prior knowledge of anomalies, we enhance it by adding artificially simulated anomalies to the original images. Unlike image reconstruction or repair, the features of synthesized defects are repaired along with those of normal areas. Finally, the aligned features containing rich semantic information are fed in-to the refinement module to obtain the anomaly map. Extensive experiments have been conducted on the MVTec-AD-Textured dataset and other real-world industrial dataset, which has demonstrated superior performance com-pared to state-of-the-art (SOTA) methods.

VCP-CLIP: A visual context prompting model for zero-shot anomaly segmentation

Recently, large-scale vision-language models such as CLIP have demonstrated immense potential in zero-shot anomaly segmentation (ZSAS) task, utilizing a unified model to directly detect anomalies on any unseen product with painstakingly crafted text prompts. However, existing methods often assume that the product category to be inspected is known, thus setting product-specific text prompts, which is difficult to achieve in the data privacy scenarios. Moreover, even the same type of product exhibits significant differences due to specific components and variations in the production process, posing significant challenges to the design of text prompts. In this end, we propose a visual context prompting model (VCP-CLIP) for ZSAS task based on CLIP. The insight behind VCP-CLIP is to employ visual context prompting to activate CLIP's anomalous semantic perception ability. In specific, we first design a Pre-VCP module to embed global visual information into the text prompt, thus eliminating the necessity for product-specific prompts. Then, we propose a novel Post-VCP module, that adjusts the text embeddings utilizing the fine-grained features of the images. In extensive experiments conducted on 10 real-world industrial anomaly segmentation datasets, VCP-CLIP achieved state-of-the-art performance in ZSAS task. The code is available at https://github.com/xiaozhen228/VCP-CLIP.

Integration of Self-Supervised BYOL in Semi-Supervised Medical Image Recognition

Image recognition techniques heavily rely on abundant labeled data, particularly in medical contexts. Addressing the challenges associated with obtaining labeled data has led to the prominence of self-supervised learning and semi-supervised learning, especially in scenarios with limited annotated data. In this paper, we proposed an innovative approach by integrating self-supervised learning into semi-supervised models to enhance medical image recognition. Our methodology commences with pre-training on unlabeled data utilizing the BYOL method. Subsequently, we merge pseudo-labeled and labeled datasets to construct a neural network classifier, refining it through iterative fine-tuning. Experimental results on three different datasets demonstrate that our approach optimally leverages unlabeled data, outperforming existing methods in terms of accuracy for medical image recognition.

DQSSA: A Quantum-Inspired Solution for Maximizing Influence in Online Social Networks (Student Abstract)

Influence Maximization is the task of selecting optimal nodes maximising the influence spread in social networks. This study proposes a Discretized Quantum-based Salp Swarm Algorithm (DQSSA) for optimizing influence diffusion in social networks. By discretizing meta-heuristic algorithms and infusing them with quantum-inspired enhancements, we address issues like premature convergence and low efficacy. The proposed method, guided by quantum principles, offers a promising solution for Influence Maximisation. Experiments on four real-world datasets reveal DQSSA's superior performance as compared to established cutting-edge algorithms.

Self-Supervised Object Segmentation with a Cut-and-Pasting GAN

This paper proposes a novel self-supervised based Cut-and-Paste GAN to perform foreground object segmentation and generate realistic composite images without manual annotations. We accomplish this goal by a simple yet effective self-supervised approach coupled with the U-Net based discriminator. The proposed method extends the ability of the standard discriminators to learn not only the global data representations via classification (real/fake) but also learn semantic and structural information through pseudo labels created using the self-supervised task. The proposed method empowers the generator to create meaningful masks by forcing it to learn informative per-pixel as well as global image feedback from the discriminator. Our experiments demonstrate that our proposed method significantly outperforms the state-of-the-art methods on the standard benchmark datasets.

An Emotion-guided Approach to Domain Adaptive Fake News Detection using Adversarial Learning

Recent works on fake news detection have shown the efficacy of using emotions as a feature for improved performance. However, the cross-domain impact of emotion-guided features for fake news detection still remains an open problem. In this work, we propose an emotion-guided, domain-adaptive, multi-task approach for cross-domain fake news detection, proving the efficacy of emotion-guided models in cross-domain settings for various datasets.

Emotion-guided Cross-domain Fake News Detection using Adversarial Domain Adaptation

Recent works on fake news detection have shown the efficacy of using emotions as a feature or emotions-based features for improved performance. However, the impact of these emotion-guided features for fake news detection in cross-domain settings, where we face the problem of domain shift, is still largely unexplored. In this work, we evaluate the impact of emotion-guided features for cross-domain fake news detection, and further propose an emotion-guided, domain-adaptive approach using adversarial learning. We prove the efficacy of emotion-guided models in cross-domain settings for various combinations of source and target datasets from FakeNewsAMT, Celeb, Politifact and Gossipcop datasets.

A Spreader Ranking Algorithm for Extremely Low-budget Influence Maximization in Social Networks using Community Bridge Nodes

In recent years, social networking platforms have gained significant popularity among the masses like connecting with people and propagating ones thoughts and opinions. This has opened the door to user-specific advertisements and recommendations on these platforms, bringing along a significant focus on Influence Maximisation (IM) on social networks due to its wide applicability in target advertising, viral marketing, and personalized recommendations. The aim of IM is to identify certain nodes in the network which can help maximize the spread of certain information through a diffusion cascade. While several works have been proposed for IM, most were inefficient in exploiting community structures to their full extent. In this work, we propose a community structures-based approach, which employs a K-Shell algorithm in order to generate a score for the connections between seed nodes and communities for low-budget scenarios. Further, our approach employs entropy within communities to ensure the proper spread of information within the communities. We choose the Independent Cascade (IC) model to simulate information spread and evaluate it on four evaluation metrics. We validate our proposed approach on eight publicly available networks and find that it significantly outperforms the baseline approaches on these metrics, while still being relatively efficient.

The Effectiveness of Social Media Engagement Strategy on Disaster Fundraising

Social media has been a powerful tool and an integral part of communication, especially during natural disasters. Social media platforms help nonprofits in effective disaster management by disseminating crucial information to various communities at the earliest. Besides spreading information to every corner of the world, various platforms incorporate many features that give access to host online fundraising events, process online donations, etc. The current literature lacks the theoretical structure investigating the correlation between social media engagement and crisis management. Large nonprofit organisations like the Australian Red Cross have upscaled their operations to help nearly 6,000 bushfire survivors through various grants and helped 21,563 people with psychological support and other assistance through their recovery program (Australian Red Cross, 2021). This paper considers the case of bushfires in Australia 2019-2020 to inspect the role of social media in escalating fundraising via analysing the donation data of the Australian Red Cross from October 2019 - March 2020 and analysing the level of public interaction with their Facebook page and its content in the same period.