Sims: An Interactive Tool for Geospatial Matching and Clustering

Acquiring, processing, and visualizing geospatial data requires significant computing resources, especially for large spatio-temporal domains. This challenge hinders the rapid discovery of predictive features, which is essential for advancing geospatial modeling. To address this, we developed Similarity Search (Sims), a no-code web tool that allows users to visualize, compare, cluster, and perform similarity search over defined regions of interest using Google Earth Engine as a backend. Sims is designed to complement existing modeling tools by focusing on feature exploration rather than model creation. We demonstrate the utility of Sims through a case study analyzing simulated maize yield data in Rwanda, where we evaluate how different combinations of soil, weather, and agronomic features affect the clustering of yield response zones. Sims is open source and available at https://github.com/microsoft/Sims

PGRID: Power Grid Reconstruction in Informal Developments Using High-Resolution Aerial Imagery

As of 2023, a record 117 million people have been displaced worldwide, more than double the number from a decade ago [22]. Of these, 32 million are refugees under the UNHCR mandate, with 8.7 million residing in refugee camps. A critical issue faced by these populations is the lack of access to electricity, with 80% of the 8.7 million refugees and displaced persons in camps globally relying on traditional biomass for cooking and lacking reliable power for essential tasks such as cooking and charging phones. Often, the burden of collecting firewood falls on women and children, who frequently travel up to 20 kilometers into dangerous areas, increasing their vulnerability.[7] Electricity access could significantly alleviate these challenges, but a major obstacle is the lack of accurate power grid infrastructure maps, particularly in resource-constrained environments like refugee camps, needed for energy access planning. Existing power grid maps are often outdated, incomplete, or dependent on costly, complex technologies, limiting their practicality. To address this issue, PGRID is a novel application-based approach, which utilizes high-resolution aerial imagery to detect electrical poles and segment electrical lines, creating precise power grid maps. PGRID was tested in the Turkana region of Kenya, specifically the Kakuma and Kalobeyei Camps, covering 84 km2 and housing over 200,000 residents. Our findings show that PGRID delivers high-fidelity power grid maps especially in unplanned settlements, with F1-scores of 0.71 and 0.82 for pole detection and line segmentation, respectively. This study highlights a practical application for leveraging open data and limited labels to improve power grid mapping in unplanned settlements, where the growing number of displaced persons urgently need sustainable energy infrastructure solutions.

Local vs. Global: Local Land-Use and Land-Cover Models Deliver Higher Quality Maps

Approximately 20% of Africa's population suffered from undernourishment, and 868 million people experienced moderate to severe food insecurity in 2022. Land-use and land-cover maps provide crucial insights for addressing food insecurity, e.g., by mapping croplands. The development of global land-cover maps has been facilitated by the increasing availability of earth observation data and advancements in geospatial machine learning. However, these global maps exhibit lower accuracy and inconsistencies in Africa, partly due to the lack of representative training data. To address this issue, we propose a data-centric framework with a teacher-student model setup, which uses diverse data sources of satellite images and label examples to produce local land-cover maps. Our method trains a high-resolution teacher model on images with a resolution of 0.331 m/pixel and a low-resolution student model on publicly available images with a resolution of 10 m/pixel. The student model also utilizes the teacher model's output as its weak label examples through knowledge distillation. We evaluated our framework using Murang'a County, Kenya, as a use case and achieved significant improvements, i.e., 0.14 in the F1 score and 0.21 in Intersection-over-Union, compared to the best global map. Our evaluation also revealed inconsistencies in existing global maps, with a maximum agreement rate of 0.30 among themselves. Insights obtained from our cross-collaborative work can provide valuable guidance to local and national policymakers in making informed decisions to improve resource utilization and food security.

Fields of The World: A Machine Learning Benchmark Dataset For Global Agricultural Field Boundary Segmentation

Crop field boundaries are foundational datasets for agricultural monitoring and assessments but are expensive to collect manually. Machine learning (ML) methods for automatically extracting field boundaries from remotely sensed images could help realize the demand for these datasets at a global scale. However, current ML methods for field instance segmentation lack sufficient geographic coverage, accuracy, and generalization capabilities. Further, research on improving ML methods is restricted by the lack of labeled datasets representing the diversity of global agricultural fields. We present Fields of The World (FTW) -- a novel ML benchmark dataset for agricultural field instance segmentation spanning 24 countries on four continents (Europe, Africa, Asia, and South America). FTW is an order of magnitude larger than previous datasets with 70,462 samples, each containing instance and semantic segmentation masks paired with multi-date, multi-spectral Sentinel-2 satellite images. We provide results from baseline models for the new FTW benchmark, show that models trained on FTW have better zero-shot and fine-tuning performance in held-out countries than models that aren't pre-trained with diverse datasets, and show positive qualitative zero-shot results of FTW models in a real-world scenario -- running on Sentinel-2 scenes over Ethiopia.

Pytorch-Wildlife: A Collaborative Deep Learning Framework for Conservation

The alarming decline in global biodiversity, driven by various factors, underscores the urgent need for large-scale wildlife monitoring. In response, scientists have turned to automated deep learning methods for data processing in wildlife monitoring. However, applying these advanced methods in real-world scenarios is challenging due to their complexity and the need for specialized knowledge, primarily because of technical challenges and interdisciplinary barriers. To address these challenges, we introduce Pytorch-Wildlife, an open-source deep learning platform built on PyTorch. It is designed for creating, modifying, and sharing powerful AI models. This platform emphasizes usability and accessibility, making it accessible to individuals with limited or no technical background. It also offers a modular codebase to simplify feature expansion and further development. Pytorch-Wildlife offers an intuitive, user-friendly interface, accessible through local installation or Hugging Face, for animal detection and classification in images and videos. As two real-world applications, Pytorch-Wildlife has been utilized to train animal classification models for species recognition in the Amazon Rainforest and for invasive opossum recognition in the Galapagos Islands. The Opossum model achieves 98% accuracy, and the Amazon model has 92% recognition accuracy for 36 animals in 90% of the data. As Pytorch-Wildlife evolves, we aim to integrate more conservation tasks, addressing various environmental challenges. Pytorch-Wildlife is available at https://github.com/microsoft/CameraTraps.

Analyzing Decades-Long Environmental Changes in Namibia Using Archival Aerial Photography and Deep Learning

This study explores object detection in historical aerial photographs of Namibia to identify long-term environmental changes. Specifically, we aim to identify key objects -- \textit{Waterholes}, \textit{Omuti homesteads}, and \textit{Big trees} -- around Oshikango in Namibia using sub-meter gray-scale aerial imagery from 1943 and 1972. In this work, we propose a workflow for analyzing historical aerial imagery using a deep semantic segmentation model on sparse hand-labels. To this end, we employ a number of strategies including class-weighting, pseudo-labeling and empirical p-value-based filtering to balance skewed and sparse representations of objects in the ground truth data. Results demonstrate the benefits of these different training strategies resulting in an average $F_1=0.661$ and $F_1=0.755$ over the three objects of interest for the 1943 and 1972 imagery, respectively. We also identified that the average size of Waterhole and Big trees increased while the average size of Omutis decreased between 1943 and 1972 reflecting some of the local effects of the massive post-Second World War economic, agricultural, demographic, and environmental changes. This work also highlights the untapped potential of historical aerial photographs in understanding long-term environmental changes beyond Namibia (and Africa). With the lack of adequate satellite technology in the past, archival aerial photography offers a great alternative to uncover decades-long environmental changes.

A slice classification neural network for automated classification of axial PET/CT slices from a multi-centric lymphoma dataset

Automated slice classification is clinically relevant since it can be incorporated into medical image segmentation workflows as a preprocessing step that would flag slices with a higher probability of containing tumors, thereby directing physicians attention to the important slices. In this work, we train a ResNet-18 network to classify axial slices of lymphoma PET/CT images (collected from two institutions) depending on whether the slice intercepted a tumor (positive slice) in the 3D image or if the slice did not (negative slice). Various instances of the network were trained on 2D axial datasets created in different ways: (i) slice-level split and (ii) patient-level split; inputs of different types were used: (i) only PET slices and (ii) concatenated PET and CT slices; and different training strategies were employed: (i) center-aware (CAW) and (ii) center-agnostic (CAG). Model performances were compared using the area under the receiver operating characteristic curve (AUROC) and the area under the precision-recall curve (AUPRC), and various binary classification metrics. We observe and describe a performance overestimation in the case of slice-level split as compared to the patient-level split training. The model trained using patient-level split data with the network input containing only PET slices in the CAG training regime was the best performing/generalizing model on a majority of metrics. Our models were additionally more closely compared using the sensitivity metric on the positive slices from their respective test sets.

Bootstrapping Rare Object Detection in High-Resolution Satellite Imagery

Rare object detection is a fundamental task in applied geospatial machine learning, however is often challenging due to large amounts of high-resolution satellite or aerial imagery and few or no labeled positive samples to start with. This paper addresses the problem of bootstrapping such a rare object detection task assuming there is no labeled data and no spatial prior over the area of interest. We propose novel offline and online cluster-based approaches for sampling patches that are significantly more efficient, in terms of exposing positive samples to a human annotator, than random sampling. We apply our methods for identifying bomas, or small enclosures for herd animals, in the Serengeti Mara region of Kenya and Tanzania. We demonstrate a significant enhancement in detection efficiency, achieving a positive sampling rate increase from 2% (random) to 30%. This advancement enables effective machine learning mapping even with minimal labeling budgets, exemplified by an F1 score on the boma detection task of 0.51 with a budget of 300 total patches.

Weak Labeling for Cropland Mapping in Africa

Cropland mapping can play a vital role in addressing environmental, agricultural, and food security challenges. However, in the context of Africa, practical applications are often hindered by the limited availability of high-resolution cropland maps. Such maps typically require extensive human labeling, thereby creating a scalability bottleneck. To address this, we propose an approach that utilizes unsupervised object clustering to refine existing weak labels, such as those obtained from global cropland maps. The refined labels, in conjunction with sparse human annotations, serve as training data for a semantic segmentation network designed to identify cropland areas. We conduct experiments to demonstrate the benefits of the improved weak labels generated by our method. In a scenario where we train our model with only 33 human-annotated labels, the F_1 score for the cropland category increases from 0.53 to 0.84 when we add the mined negative labels.

Seeing the roads through the trees: A benchmark for modeling spatial dependencies with aerial imagery

Fully understanding a complex high-resolution satellite or aerial imagery scene often requires spatial reasoning over a broad relevant context. The human object recognition system is able to understand object in a scene over a long-range relevant context. For example, if a human observes an aerial scene that shows sections of road broken up by tree canopy, then they will be unlikely to conclude that the road has actually been broken up into disjoint pieces by trees and instead think that the canopy of nearby trees is occluding the road. However, there is limited research being conducted to understand long-range context understanding of modern machine learning models. In this work we propose a road segmentation benchmark dataset, Chesapeake Roads Spatial Context (RSC), for evaluating the spatial long-range context understanding of geospatial machine learning models and show how commonly used semantic segmentation models can fail at this task. For example, we show that a U-Net trained to segment roads from background in aerial imagery achieves an 84% recall on unoccluded roads, but just 63.5% recall on roads covered by tree canopy despite being trained to model both the same way. We further analyze how the performance of models changes as the relevant context for a decision (unoccluded roads in our case) varies in distance. We release the code to reproduce our experiments and dataset of imagery and masks to encourage future research in this direction -- https://github.com/isaaccorley/ChesapeakeRSC.