PyG-SSL: A Graph Self-Supervised Learning Toolkit

Graph Self-Supervised Learning (SSL) has emerged as a pivotal area of research in recent years. By engaging in pretext tasks to learn the intricate topological structures and properties of graphs using unlabeled data, these graph SSL models achieve enhanced performance, improved generalization, and heightened robustness. Despite the remarkable achievements of these graph SSL methods, their current implementation poses significant challenges for beginners and practitioners due to the complex nature of graph structures, inconsistent evaluation metrics, and concerns regarding reproducibility hinder further progress in this field. Recognizing the growing interest within the research community, there is an urgent need for a comprehensive, beginner-friendly, and accessible toolkit consisting of the most representative graph SSL algorithms. To address these challenges, we present a Graph SSL toolkit named PyG-SSL, which is built upon PyTorch and is compatible with various deep learning and scientific computing backends. Within the toolkit, we offer a unified framework encompassing dataset loading, hyper-parameter configuration, model training, and comprehensive performance evaluation for diverse downstream tasks. Moreover, we provide beginner-friendly tutorials and the best hyper-parameters of each graph SSL algorithm on different graph datasets, facilitating the reproduction of results. The GitHub repository of the library is https://github.com/iDEA-iSAIL-Lab-UIUC/pyg-ssl.

APEX$^2$: Adaptive and Extreme Summarization for Personalized Knowledge Graphs

Knowledge graphs (KGs), which store an extensive number of relational facts, serve various applications. Recently, personalized knowledge graphs (PKGs) have emerged as a solution to optimize storage costs by customizing their content to align with users' specific interests within particular domains. In the real world, on one hand, user queries and their underlying interests are inherently evolving, requiring PKGs to adapt continuously; on the other hand, the summarization is constantly expected to be as small as possible in terms of storage cost. However, the existing PKG summarization methods implicitly assume that the user's interests are constant and do not shift. Furthermore, when the size constraint of PKG is extremely small, the existing methods cannot distinguish which facts are more of immediate interest and guarantee the utility of the summarized PKG. To address these limitations, we propose APEX$^2$, a highly scalable PKG summarization framework designed with robust theoretical guarantees to excel in adaptive summarization tasks with extremely small size constraints. To be specific, after constructing an initial PKG, APEX$^2$ continuously tracks the interest shift and adjusts the previous summary. We evaluate APEX$^2$ under an evolving query setting on benchmark KGs containing up to 12 million triples, summarizing with compression ratios $\leq 0.1\%$. The experiments show that APEX outperforms state-of-the-art baselines in terms of both query-answering accuracy and efficiency.

Trustworthy Transfer Learning: A Survey

Transfer learning aims to transfer knowledge or information from a source domain to a relevant target domain. In this paper, we understand transfer learning from the perspectives of knowledge transferability and trustworthiness. This involves two research questions: How is knowledge transferability quantitatively measured and enhanced across domains? Can we trust the transferred knowledge in the transfer learning process? To answer these questions, this paper provides a comprehensive review of trustworthy transfer learning from various aspects, including problem definitions, theoretical analysis, empirical algorithms, and real-world applications. Specifically, we summarize recent theories and algorithms for understanding knowledge transferability under (within-domain) IID and non-IID assumptions. In addition to knowledge transferability, we review the impact of trustworthiness on transfer learning, e.g., whether the transferred knowledge is adversarially robust or algorithmically fair, how to transfer the knowledge under privacy-preserving constraints, etc. Beyond discussing the current advancements, we highlight the open questions and future directions for understanding transfer learning in a reliable and trustworthy manner.

Can Graph Neural Networks Learn Language with Extremely Weak Text Supervision?

While great success has been achieved in building vision models with Contrastive Language-Image Pre-training (CLIP) over Internet-scale image-text pairs, building transferable Graph Neural Networks (GNNs) with CLIP pipeline is challenging because of three fundamental issues: the scarcity of labeled data and text supervision, different levels of downstream tasks, and the conceptual gaps between domains. In this work, to address these issues, we leverage multi-modal prompt learning to effectively adapt pre-trained GNN to downstream tasks and data, given only a few semantically labeled samples, each with extremely weak text supervision. Our new paradigm embeds the graphs directly in the same space as the Large Language Models (LLMs) by learning both graph prompts and text prompts simultaneously. To accomplish this, we improve state-of-the-art graph prompt method, and then propose the first graph-language multi-modal prompt learning approach for exploiting the knowledge in pre-trained models. Notably, due to the insufficient supervision for fine-tuning, in our paradigm, the pre-trained GNN and the LLM are kept frozen, so the learnable parameters are much fewer than fine-tuning any pre-trained model. Through extensive experiments on real-world datasets, we demonstrate the superior performance of our paradigm in few-shot, multi-task-level, and cross-domain settings. Moreover, we build the first CLIP-style zero-shot classification prototype that can generalize GNNs to unseen classes with extremely weak text supervision.

Provably Extending PageRank-based Local Clustering Algorithm to Weighted Directed Graphs with Self-Loops and to Hypergraphs

Local clustering aims to find a compact cluster near the given starting instances. This work focuses on graph local clustering, which has broad applications beyond graphs because of the internal connectivities within various modalities. While most existing studies on local graph clustering adopt the discrete graph setting (i.e., unweighted graphs without self-loops), real-world graphs can be more complex. In this paper, we extend the non-approximating Andersen-Chung-Lang ("ACL") algorithm beyond discrete graphs and generalize its quadratic optimality to a wider range of graphs, including weighted, directed, and self-looped graphs and hypergraphs. Specifically, leveraging PageRank, we propose two algorithms: GeneralACL for graphs and HyperACL for hypergraphs. We theoretically prove that, under two mild conditions, both algorithms can identify a quadratically optimal local cluster in terms of conductance with at least 1/2 probability. On the property of hypergraphs, we address a fundamental gap in the literature by defining conductance for hypergraphs from the perspective of hypergraph random walks. Additionally, we provide experiments to validate our theoretical findings.

Transforming the Hybrid Cloud for Emerging AI Workloads

This white paper, developed through close collaboration between IBM Research and UIUC researchers within the IIDAI Institute, envisions transforming hybrid cloud systems to meet the growing complexity of AI workloads through innovative, full-stack co-design approaches, emphasizing usability, manageability, affordability, adaptability, efficiency, and scalability. By integrating cutting-edge technologies such as generative and agentic AI, cross-layer automation and optimization, unified control plane, and composable and adaptive system architecture, the proposed framework addresses critical challenges in energy efficiency, performance, and cost-effectiveness. Incorporating quantum computing as it matures will enable quantum-accelerated simulations for materials science, climate modeling, and other high-impact domains. Collaborative efforts between academia and industry are central to this vision, driving advancements in foundation models for material design and climate solutions, scalable multimodal data processing, and enhanced physics-based AI emulators for applications like weather forecasting and carbon sequestration. Research priorities include advancing AI agentic systems, LLM as an Abstraction (LLMaaA), AI model optimization and unified abstractions across heterogeneous infrastructure, end-to-end edge-cloud transformation, efficient programming model, middleware and platform, secure infrastructure, application-adaptive cloud systems, and new quantum-classical collaborative workflows. These ideas and solutions encompass both theoretical and practical research questions, requiring coordinated input and support from the research community. This joint initiative aims to establish hybrid clouds as secure, efficient, and sustainable platforms, fostering breakthroughs in AI-driven applications and scientific discovery across academia, industry, and society.

Co-clustering for Federated Recommender System

As data privacy and security attract increasing attention, Federated Recommender System (FRS) offers a solution that strikes a balance between providing high-quality recommendations and preserving user privacy. However, the presence of statistical heterogeneity in FRS, commonly observed due to personalized decision-making patterns, can pose challenges. To address this issue and maximize the benefit of collaborative filtering (CF) in FRS, it is intuitive to consider clustering clients (users) as well as items into different groups and learning group-specific models. Existing methods either resort to client clustering via user representations-risking privacy leakage, or employ classical clustering strategies on item embeddings or gradients, which we found are plagued by the curse of dimensionality. In this paper, we delve into the inefficiencies of the K-Means method in client grouping, attributing failures due to the high dimensionality as well as data sparsity occurring in FRS, and propose CoFedRec, a novel Co-clustering Federated Recommendation mechanism, to address clients heterogeneity and enhance the collaborative filtering within the federated framework. Specifically, the server initially formulates an item membership from the client-provided item networks. Subsequently, clients are grouped regarding a specific item category picked from the item membership during each communication round, resulting in an intelligently aggregated group model. Meanwhile, to comprehensively capture the global inter-relationships among items, we incorporate an additional supervised contrastive learning term based on the server-side generated item membership into the local training phase for each client. Extensive experiments on four datasets are provided, which verify the effectiveness of the proposed CoFedRec.

PageRank Bandits for Link Prediction

Link prediction is a critical problem in graph learning with broad applications such as recommender systems and knowledge graph completion. Numerous research efforts have been directed at solving this problem, including approaches based on similarity metrics and Graph Neural Networks (GNN). However, most existing solutions are still rooted in conventional supervised learning, which makes it challenging to adapt over time to changing customer interests and to address the inherent dilemma of exploitation versus exploration in link prediction. To tackle these challenges, this paper reformulates link prediction as a sequential decision-making process, where each link prediction interaction occurs sequentially. We propose a novel fusion algorithm, PRB (PageRank Bandits), which is the first to combine contextual bandits with PageRank for collaborative exploitation and exploration. We also introduce a new reward formulation and provide a theoretical performance guarantee for PRB. Finally, we extensively evaluate PRB in both online and offline settings, comparing it with bandit-based and graph-based methods. The empirical success of PRB demonstrates the value of the proposed fusion approach. Our code is released at https://github.com/jiaruzouu/PRB.

LLM-Forest for Health Tabular Data Imputation

Missing data imputation is a critical challenge in tabular datasets, especially in healthcare, where data completeness is vital for accurate analysis. Large language models (LLMs), trained on vast corpora, have shown strong potential in data generation, making them a promising tool for tabular data imputation. However, challenges persist in designing effective prompts for a finetuning-free process and in mitigating the risk of LLM hallucinations. To address these issues, we propose a novel framework, LLM-Forest, which introduces a "forest" of few-shot learning LLM "trees" with confidence-based weighted voting. This framework is established on a new concept of bipartite information graphs to identify high-quality relevant neighboring entries with both feature and value granularity. Extensive experiments on four real-world healthcare datasets demonstrate the effectiveness and efficiency of LLM-Forest.

Hypergraphs as Weighted Directed Self-Looped Graphs: Spectral Properties, Clustering, Cheeger Inequality

Hypergraphs naturally arise when studying group relations and have been widely used in the field of machine learning. There has not been a unified formulation of hypergraphs, yet the recently proposed edge-dependent vertex weights (EDVW) modeling is one of the most generalized modeling methods of hypergraphs, i.e., most existing hypergraphs can be formulated as EDVW hypergraphs without any information loss to the best of our knowledge. However, the relevant algorithmic developments on EDVW hypergraphs remain nascent: compared to spectral graph theories, the formulations are incomplete, the spectral clustering algorithms are not well-developed, and one result regarding hypergraph Cheeger Inequality is even incorrect. To this end, deriving a unified random walk-based formulation, we propose our definitions of hypergraph Rayleigh Quotient, NCut, boundary/cut, volume, and conductance, which are consistent with the corresponding definitions on graphs. Then, we prove that the normalized hypergraph Laplacian is associated with the NCut value, which inspires our HyperClus-G algorithm for spectral clustering on EDVW hypergraphs. Finally, we prove that HyperClus-G can always find an approximately linearly optimal partitioning in terms of Both NCut and conductance. Additionally, we provide extensive experiments to validate our theoretical findings from an empirical perspective.