SpecPCM: A Low-power PCM-based In-Memory Computing Accelerator for Full-stack Mass Spectrometry Analysis

Mass spectrometry (MS) is essential for proteomics and metabolomics but faces impending challenges in efficiently processing the vast volumes of data. This paper introduces SpecPCM, an in-memory computing (IMC) accelerator designed to achieve substantial improvements in energy and delay efficiency for both MS spectral clustering and database (DB) search. SpecPCM employs analog processing with low-voltage swing and utilizes recently introduced phase change memory (PCM) devices based on superlattice materials, optimized for low-voltage and low-power programming. Our approach integrates contributions across multiple levels: application, algorithm, circuit, device, and instruction sets. We leverage a robust hyperdimensional computing (HD) algorithm with a novel dimension-packing method and develop specialized hardware for the end-to-end MS pipeline to overcome the non-ideal behavior of PCM devices. We further optimize multi-level PCM devices for different tasks by using different materials. We also perform a comprehensive design exploration to improve energy and delay efficiency while maintaining accuracy, exploring various combinations of hardware and software parameters controlled by the instruction set architecture (ISA). SpecPCM, with up to three bits per cell, achieves speedups of up to 82x and 143x for MS clustering and DB search tasks, respectively, along with a four-orders-of-magnitude improvement in energy efficiency compared with state-of-the-art CPU/GPU tools.

FSL-HDnn: A 5.7 TOPS/W End-to-end Few-shot Learning Classifier Accelerator with Feature Extraction and Hyperdimensional Computing

This paper introduces FSL-HDnn, an energy-efficient accelerator that implements the end-to-end pipeline of feature extraction, classification, and on-chip few-shot learning (FSL) through gradient-free learning techniques in a 40 nm CMOS process. At its core, FSL-HDnn integrates two low-power modules: Weight clustering feature extractor and Hyperdimensional Computing (HDC). Feature extractor utilizes advanced weight clustering and pattern reuse strategies for optimized CNN-based feature extraction. Meanwhile, HDC emerges as a novel approach for lightweight FSL classifier, employing hyperdimensional vectors to improve training accuracy significantly compared to traditional distance-based approaches. This dual-module synergy not only simplifies the learning process by eliminating the need for complex gradients but also dramatically enhances energy efficiency and performance. Specifically, FSL-HDnn achieves an Intensity unprecedented energy efficiency of 5.7 TOPS/W for feature 1 extraction and 0.78 TOPS/W for classification and learning Training Intensity phases, achieving improvements of 2.6X and 6.6X, respectively, Storage over current state-of-the-art CNN and FSL processors.

E-QUARTIC: Energy Efficient Edge Ensemble of Convolutional Neural Networks for Resource-Optimized Learning

Ensemble learning is a meta-learning approach that combines the predictions of multiple learners, demonstrating improved accuracy and robustness. Nevertheless, ensembling models like Convolutional Neural Networks (CNNs) result in high memory and computing overhead, preventing their deployment in embedded systems. These devices are usually equipped with small batteries that provide power supply and might include energy-harvesting modules that extract energy from the environment. In this work, we propose E-QUARTIC, a novel Energy Efficient Edge Ensembling framework to build ensembles of CNNs targeting Artificial Intelligence (AI)-based embedded systems. Our design outperforms single-instance CNN baselines and state-of-the-art edge AI solutions, improving accuracy and adapting to varying energy conditions while maintaining similar memory requirements. Then, we leverage the multi-CNN structure of the designed ensemble to implement an energy-aware model selection policy in energy-harvesting AI systems. We show that our solution outperforms the state-of-the-art by reducing system failure rate by up to 40% while ensuring higher average output qualities. Ultimately, we show that the proposed design enables concurrent on-device training and high-quality inference execution at the edge, limiting the performance and energy overheads to less than 0.04%.

MicroHD: An Accuracy-Driven Optimization of Hyperdimensional Computing Algorithms for TinyML systems

Hyperdimensional computing (HDC) is emerging as a promising AI approach that can effectively target TinyML applications thanks to its lightweight computing and memory requirements. Previous works on HDC showed that limiting the standard 10k dimensions of the hyperdimensional space to much lower values is possible, reducing even more HDC resource requirements. Similarly, other studies demonstrated that binary values can be used as elements of the generated hypervectors, leading to significant efficiency gains at the cost of some degree of accuracy degradation. Nevertheless, current optimization attempts do not concurrently co-optimize HDC hyper-parameters, and accuracy degradation is not directly controlled, resulting in sub-optimal HDC models providing several applications with unacceptable output qualities. In this work, we propose MicroHD, a novel accuracy-driven HDC optimization approach that iteratively tunes HDC hyper-parameters, reducing memory and computing requirements while ensuring user-defined accuracy levels. The proposed method can be applied to HDC implementations using different encoding functions, demonstrates good scalability for larger HDC workloads, and achieves compression and efficiency gains up to 200x when compared to baseline implementations for accuracy degradations lower than 1%.

Lifelong Intelligence Beyond the Edge using Hyperdimensional Computing

On-device learning has emerged as a prevailing trend that avoids the slow response time and costly communication of cloud-based learning. The ability to learn continuously and indefinitely in a changing environment, and with resource constraints, is critical for real sensor deployments. However, existing designs are inadequate for practical scenarios with (i) streaming data input, (ii) lack of supervision and (iii) limited on-board resources. In this paper, we design and deploy the first on-device lifelong learning system called LifeHD for general IoT applications with limited supervision. LifeHD is designed based on a novel neurally-inspired and lightweight learning paradigm called Hyperdimensional Computing (HDC). We utilize a two-tier associative memory organization to intelligently store and manage high-dimensional, low-precision vectors, which represent the historical patterns as cluster centroids. We additionally propose two variants of LifeHD to cope with scarce labeled inputs and power constraints. We implement LifeHD on off-the-shelf edge platforms and perform extensive evaluations across three scenarios. Our measurements show that LifeHD improves the unsupervised clustering accuracy by up to 74.8% compared to the state-of-the-art NN-based unsupervised lifelong learning baselines with as much as 34.3x better energy efficiency. Our code is available at https://github.com/Orienfish/LifeHD.

Federated Hyperdimensional Computing

Federated learning (FL) enables a loose set of participating clients to collaboratively learn a global model via coordination by a central server and with no need for data sharing. Existing FL approaches that rely on complex algorithms with massive models, such as deep neural networks (DNNs), suffer from computation and communication bottlenecks. In this paper, we first propose FedHDC, a federated learning framework based on hyperdimensional computing (HDC). FedHDC allows for fast and light-weight local training on clients, provides robust learning, and has smaller model communication overhead compared to learning with DNNs. However, current HDC algorithms get poor accuracy when classifying larger & more complex images, such as CIFAR10. To address this issue, we design FHDnn, which complements FedHDC with a self-supervised contrastive learning feature extractor. We avoid the transmission of the DNN and instead train only the HDC learner in a federated manner, which accelerates learning, reduces transmission cost, and utilizes the robustness of HDC to tackle network errors. We present a formal analysis of the algorithm and derive its convergence rate both theoretically, and show experimentally that FHDnn converges 3$\times$ faster vs. DNNs. The strategies we propose to improve the communication efficiency enable our design to reduce communication costs by 66$\times$ vs. DNNs, local client compute and energy consumption by ~1.5 - 6$\times$, while being highly robust to network errors. Finally, our proposed strategies for improving the communication efficiency have up to 32$\times$ lower communication costs with good accuracy.

SpecHD: Hyperdimensional Computing Framework for FPGA-based Mass Spectrometry Clustering

Mass spectrometry-based proteomics is a key enabler for personalized healthcare, providing a deep dive into the complex protein compositions of biological systems. This technology has vast applications in biotechnology and biomedicine but faces significant computational bottlenecks. Current methodologies often require multiple hours or even days to process extensive datasets, particularly in the domain of spectral clustering. To tackle these inefficiencies, we introduce SpecHD, a hyperdimensional computing (HDC) framework supplemented by an FPGA-accelerated architecture with integrated near-storage preprocessing. Utilizing streamlined binary operations in an HDC environment, SpecHD capitalizes on the low-latency and parallel capabilities of FPGAs. This approach markedly improves clustering speed and efficiency, serving as a catalyst for real-time, high-throughput data analysis in future healthcare applications. Our evaluations demonstrate that SpecHD not only maintains but often surpasses existing clustering quality metrics while drastically cutting computational time. Specifically, it can cluster a large-scale human proteome dataset-comprising 25 million MS/MS spectra and 131 GB of MS data-in just 5 minutes. With energy efficiency exceeding 31x and a speedup factor that spans a range of 6x to 54x over existing state of-the-art solutions, SpecHD emerges as a promising solution for the rapid analysis of mass spectrometry data with great implications for personalized healthcare.

Mem-Rec: Memory Efficient Recommendation System using Alternative Representation

Deep learning-based recommendation systems (e.g., DLRMs) are widely used AI models to provide high-quality personalized recommendations. Training data used for modern recommendation systems commonly includes categorical features taking on tens-of-millions of possible distinct values. These categorical tokens are typically assigned learned vector representations, that are stored in large embedding tables, on the order of 100s of GB. Storing and accessing these tables represent a substantial burden in commercial deployments. Our work proposes MEM-REC, a novel alternative representation approach for embedding tables. MEM-REC leverages bloom filters and hashing methods to encode categorical features using two cache-friendly embedding tables. The first table (token embedding) contains raw embeddings (i.e. learned vector representation), and the second table (weight embedding), which is much smaller, contains weights to scale these raw embeddings to provide better discriminative capability to each data point. We provide a detailed architecture, design and analysis of MEM-REC addressing trade-offs in accuracy and computation requirements, in comparison with state-of-the-art techniques. We show that MEM-REC can not only maintain the recommendation quality and significantly reduce the memory footprint for commercial scale recommendation models but can also improve the embedding latency. In particular, based on our results, MEM-REC compresses the MLPerf CriteoTB benchmark DLRM model size by 2900x and performs up to 3.4x faster embeddings while achieving the same AUC as that of the full uncompressed model.

DODEM: DOuble DEfense Mechanism Against Adversarial Attacks Towards Secure Industrial Internet of Things Analytics

Industrial Internet of Things (I-IoT) is a collaboration of devices, sensors, and networking equipment to monitor and collect data from industrial operations. Machine learning (ML) methods use this data to make high-level decisions with minimal human intervention. Data-driven predictive maintenance (PDM) is a crucial ML-based I-IoT application to find an optimal maintenance schedule for industrial assets. The performance of these ML methods can seriously be threatened by adversarial attacks where an adversary crafts perturbed data and sends it to the ML model to deteriorate its prediction performance. The models should be able to stay robust against these attacks where robustness is measured by how much perturbation in input data affects model performance. Hence, there is a need for effective defense mechanisms that can protect these models against adversarial attacks. In this work, we propose a double defense mechanism to detect and mitigate adversarial attacks in I-IoT environments. We first detect if there is an adversarial attack on a given sample using novelty detection algorithms. Then, based on the outcome of our algorithm, marking an instance as attack or normal, we select adversarial retraining or standard training to provide a secondary defense layer. If there is an attack, adversarial retraining provides a more robust model, while we apply standard training for regular samples. Since we may not know if an attack will take place, our adaptive mechanism allows us to consider irregular changes in data. The results show that our double defense strategy is highly efficient where we can improve model robustness by up to 64.6% and 52% compared to standard and adversarial retraining, respectively.

Async-HFL: Efficient and Robust Asynchronous Federated Learning in Hierarchical IoT Networks

Federated Learning (FL) has gained increasing interest in recent years as a distributed on-device learning paradigm. However, multiple challenges remain to be addressed for deploying FL in real-world Internet-of-Things (IoT) networks with hierarchies. Although existing works have proposed various approaches to account data heterogeneity, system heterogeneity, unexpected stragglers and scalibility, none of them provides a systematic solution to address all of the challenges in a hierarchical and unreliable IoT network. In this paper, we propose an asynchronous and hierarchical framework (Async-HFL) for performing FL in a common three-tier IoT network architecture. In response to the largely varied delays, Async-HFL employs asynchronous aggregations at both the gateway and the cloud levels thus avoids long waiting time. To fully unleash the potential of Async-HFL in converging speed under system heterogeneities and stragglers, we design device selection at the gateway level and device-gateway association at the cloud level. Device selection chooses edge devices to trigger local training in real-time while device-gateway association determines the network topology periodically after several cloud epochs, both satisfying bandwidth limitation. We evaluate Async-HFL's convergence speedup using large-scale simulations based on ns-3 and a network topology from NYCMesh. Our results show that Async-HFL converges 1.08-1.31x faster in wall-clock time and saves up to 21.6% total communication cost compared to state-of-the-art asynchronous FL algorithms (with client selection). We further validate Async-HFL on a physical deployment and observe robust convergence under unexpected stragglers.