How many patients could we save with LLM priors?

Imagine a world where clinical trials need far fewer patients to achieve the same statistical power, thanks to the knowledge encoded in large language models (LLMs). We present a novel framework for hierarchical Bayesian modeling of adverse events in multi-center clinical trials, leveraging LLM-informed prior distributions. Unlike data augmentation approaches that generate synthetic data points, our methodology directly obtains parametric priors from the model. Our approach systematically elicits informative priors for hyperparameters in hierarchical Bayesian models using a pre-trained LLM, enabling the incorporation of external clinical expertise directly into Bayesian safety modeling. Through comprehensive temperature sensitivity analysis and rigorous cross-validation on real-world clinical trial data, we demonstrate that LLM-derived priors consistently improve predictive performance compared to traditional meta-analytical approaches. This methodology paves the way for more efficient and expert-informed clinical trial design, enabling substantial reductions in the number of patients required to achieve robust safety assessment and with the potential to transform drug safety monitoring and regulatory decision making.

FloraSyntropy-Net: Scalable Deep Learning with Novel FloraSyntropy Archive for Large-Scale Plant Disease Diagnosis

Early diagnosis of plant diseases is critical for global food safety, yet most AI solutions lack the generalization required for real-world agricultural diversity. These models are typically constrained to specific species, failing to perform accurately across the broad spectrum of cultivated plants. To address this gap, we first introduce the FloraSyntropy Archive, a large-scale dataset of 178,922 images across 35 plant species, annotated with 97 distinct disease classes. We establish a benchmark by evaluating numerous existing models on this archive, revealing a significant performance gap. We then propose FloraSyntropy-Net, a novel federated learning framework (FL) that integrates a Memetic Algorithm (MAO) for optimal base model selection (DenseNet201), a novel Deep Block for enhanced feature representation, and a client-cloning strategy for scalable, privacy-preserving training. FloraSyntropy-Net achieves a state-of-the-art accuracy of 96.38% on the FloraSyntropy benchmark. Crucially, to validate its generalization capability, we test the model on the unrelated multiclass Pest dataset, where it demonstrates exceptional adaptability, achieving 99.84% accuracy. This work provides not only a valuable new resource but also a robust and highly generalizable framework that advances the field towards practical, large-scale agricultural AI applications.

FOLC-Net: A Federated-Optimized Lightweight Architecture for Enhanced MRI Disease Diagnosis across Axial, Coronal, and Sagittal Views

The framework is designed to improve performance in the analysis of combined as well as single anatomical perspectives for MRI disease diagnosis. It specifically addresses the performance degradation observed in state-of-the-art (SOTA) models, particularly when processing axial, coronal, and sagittal anatomical planes. The paper introduces the FOLC-Net framework, which incorporates a novel federated-optimized lightweight architecture with approximately 1.217 million parameters and a storage requirement of only 0.9 MB. FOLC-Net integrates Manta-ray foraging optimization (MRFO) mechanisms for efficient model structure generation, global model cloning for scalable training, and ConvNeXt for enhanced client adaptability. The model was evaluated on combined multi-view data as well as individual views, such as axial, coronal, and sagittal, to assess its robustness in various medical imaging scenarios. Moreover, FOLC-Net tests a ShallowFed model on different data to evaluate its ability to generalize beyond the training dataset. The results show that FOLC-Net outperforms existing models, particularly in the challenging sagittal view. For instance, FOLC-Net achieved an accuracy of 92.44% on the sagittal view, significantly higher than the 88.37% accuracy of study method (DL + Residual Learning) and 88.95% of DL models. Additionally, FOLC-Net demonstrated improved accuracy across all individual views, providing a more reliable and robust solution for medical image analysis in decentralized environments. FOLC-Net addresses the limitations of existing SOTA models by providing a framework that ensures better adaptability to individual views while maintaining strong performance in multi-view settings. The incorporation of MRFO, global model cloning, and ConvNeXt ensures that FOLC-Net performs better in real-world medical applications.

IMAGIC-500: IMputation benchmark on A Generative Imaginary Country (500k samples)

Missing data imputation in tabular datasets remains a pivotal challenge in data science and machine learning, particularly within socioeconomic research. However, real-world socioeconomic datasets are typically subject to strict data protection protocols, which often prohibit public sharing, even for synthetic derivatives. This severely limits the reproducibility and accessibility of benchmark studies in such settings. Further, there are very few publicly available synthetic datasets. Thus, there is limited availability of benchmarks for systematic evaluation of imputation methods on socioeconomic datasets, whether real or synthetic. In this study, we utilize the World Bank's publicly available synthetic dataset, Synthetic Data for an Imaginary Country, which closely mimics a real World Bank household survey while being fully public, enabling broad access for methodological research. With this as a starting point, we derived the IMAGIC-500 dataset: we select a subset of 500k individuals across approximately 100k households with 19 socioeconomic features, designed to reflect the hierarchical structure of real-world household surveys. This paper introduces a comprehensive missing data imputation benchmark on IMAGIC-500 under various missing mechanisms (MCAR, MAR, MNAR) and missingness ratios (10\%, 20\%, 30\%, 40\%, 50\%). Our evaluation considers the imputation accuracy for continuous and categorical variables, computational efficiency, and impact on downstream predictive tasks, such as estimating educational attainment at the individual level. The results highlight the strengths and weaknesses of statistical, traditional machine learning, and deep learning imputation techniques, including recent diffusion-based methods. The IMAGIC-500 dataset and benchmark aim to facilitate the development of robust imputation algorithms and foster reproducible social science research.

Robust & Precise Knowledge Distillation-based Novel Context-Aware Predictor for Disease Detection in Brain and Gastrointestinal

Medical disease prediction, particularly through imaging, remains a challenging task due to the complexity and variability of medical data, including noise, ambiguity, and differing image quality. Recent deep learning models, including Knowledge Distillation (KD) methods, have shown promising results in brain tumor image identification but still face limitations in handling uncertainty and generalizing across diverse medical conditions. Traditional KD methods often rely on a context-unaware temperature parameter to soften teacher model predictions, which does not adapt effectively to varying uncertainty levels present in medical images. To address this issue, we propose a novel framework that integrates Ant Colony Optimization (ACO) for optimal teacher-student model selection and a novel context-aware predictor approach for temperature scaling. The proposed context-aware framework adjusts the temperature based on factors such as image quality, disease complexity, and teacher model confidence, allowing for more robust knowledge transfer. Additionally, ACO efficiently selects the most appropriate teacher-student model pair from a set of pre-trained models, outperforming current optimization methods by exploring a broader solution space and better handling complex, non-linear relationships within the data. The proposed framework is evaluated using three publicly available benchmark datasets, each corresponding to a distinct medical imaging task. The results demonstrate that the proposed framework significantly outperforms current state-of-the-art methods, achieving top accuracy rates: 98.01% on the MRI brain tumor (Kaggle) dataset, 92.81% on the Figshare MRI dataset, and 96.20% on the GastroNet dataset. This enhanced performance is further evidenced by the improved results, surpassing existing benchmarks of 97.24% (Kaggle), 91.43% (Figshare), and 95.00% (GastroNet).

When Counterfactual Reasoning Fails: Chaos and Real-World Complexity

Counterfactual reasoning, a cornerstone of human cognition and decision-making, is often seen as the 'holy grail' of causal learning, with applications ranging from interpreting machine learning models to promoting algorithmic fairness. While counterfactual reasoning has been extensively studied in contexts where the underlying causal model is well-defined, real-world causal modeling is often hindered by model and parameter uncertainty, observational noise, and chaotic behavior. The reliability of counterfactual analysis in such settings remains largely unexplored. In this work, we investigate the limitations of counterfactual reasoning within the framework of Structural Causal Models. Specifically, we empirically investigate \emph{counterfactual sequence estimation} and highlight cases where it becomes increasingly unreliable. We find that realistic assumptions, such as low degrees of model uncertainty or chaotic dynamics, can result in counterintuitive outcomes, including dramatic deviations between predicted and true counterfactual trajectories. This work urges caution when applying counterfactual reasoning in settings characterized by chaos and uncertainty. Furthermore, it raises the question of whether certain systems may pose fundamental limitations on the ability to answer counterfactual questions about their behavior.

AI-Driven Diabetic Retinopathy Diagnosis Enhancement through Image Processing and Salp Swarm Algorithm-Optimized Ensemble Network

Diabetic retinopathy is a leading cause of blindness in diabetic patients and early detection plays a crucial role in preventing vision loss. Traditional diagnostic methods are often time-consuming and prone to errors. The emergence of deep learning techniques has provided innovative solutions to improve diagnostic efficiency. However, single deep learning models frequently face issues related to extracting key features from complex retinal images. To handle this problem, we present an effective ensemble method for DR diagnosis comprising four main phases: image pre-processing, selection of backbone pre-trained models, feature enhancement, and optimization. Our methodology initiates with the pre-processing phase, where we apply CLAHE to enhance image contrast and Gamma correction is then used to adjust the brightness for better feature recognition. We then apply Discrete Wavelet Transform (DWT) for image fusion by combining multi-resolution details to create a richer dataset. Then, we selected three pre-trained models with the best performance named DenseNet169, MobileNetV1, and Xception for diverse feature extraction. To further improve feature extraction, an improved residual block is integrated into each model. Finally, the predictions from these base models are then aggregated using weighted ensemble approach, with the weights optimized by using Salp Swarm Algorithm (SSA).SSA intelligently explores the weight space and finds the optimal configuration of base architectures to maximize the performance of the ensemble model. The proposed model is evaluated on the multiclass Kaggle APTOS 2019 dataset and obtained 88.52% accuracy.

Neural Spatiotemporal Point Processes: Trends and Challenges

Spatiotemporal point processes (STPPs) are probabilistic models for events occurring in continuous space and time. Real-world event data often exhibit intricate dependencies and heterogeneous dynamics. By incorporating modern deep learning techniques, STPPs can model these complexities more effectively than traditional approaches. Consequently, the fusion of neural methods with STPPs has become an active and rapidly evolving research area. In this review, we categorize existing approaches, unify key design choices, and explain the challenges of working with this data modality. We further highlight emerging trends and diverse application domains. Finally, we identify open challenges and gaps in the literature.

CleanSurvival: Automated data preprocessing for time-to-event models using reinforcement learning

Data preprocessing is a critical yet frequently neglected aspect of machine learning, often paid little attention despite its potentially significant impact on model performance. While automated machine learning pipelines are starting to recognize and integrate data preprocessing into their solutions for classification and regression tasks, this integration is lacking for more specialized tasks like survival or time-to-event models. As a result, survival analysis not only faces the general challenges of data preprocessing but also suffers from the lack of tailored, automated solutions in this area. To address this gap, this paper presents 'CleanSurvival', a reinforcement-learning-based solution for optimizing preprocessing pipelines, extended specifically for survival analysis. The framework can handle continuous and categorical variables, using Q-learning to select which combination of data imputation, outlier detection and feature extraction techniques achieves optimal performance for a Cox, random forest, neural network or user-supplied time-to-event model. The package is available on GitHub: https://github.com/datasciapps/CleanSurvival Experimental benchmarks on real-world datasets show that the Q-learning-based data preprocessing results in superior predictive performance to standard approaches, finding such a model up to 10 times faster than undirected random grid search. Furthermore, a simulation study demonstrates the effectiveness in different types and levels of missingness and noise in the data.

Quantitative knowledge retrieval from large language models

Large language models (LLMs) have been extensively studied for their abilities to generate convincing natural language sequences, however their utility for quantitative information retrieval is less well understood. In this paper we explore the feasibility of LLMs as a mechanism for quantitative knowledge retrieval to aid data analysis tasks such as elicitation of prior distributions for Bayesian models and imputation of missing data. We present a prompt engineering framework, treating an LLM as an interface to a latent space of scientific literature, comparing responses in different contexts and domains against more established approaches. Implications and challenges of using LLMs as 'experts' are discussed.