DataVisT5: A Pre-trained Language Model for Jointly Understanding Text and Data Visualization

Data visualization (DV) is the fundamental and premise tool to improve the efficiency in conveying the insights behind the big data, which has been widely accepted in existing data-driven world. Task automation in DV, such as converting natural language queries to visualizations (i.e., text-to-vis), generating explanations from visualizations (i.e., vis-to-text), answering DV-related questions in free form (i.e. FeVisQA), and explicating tabular data (i.e., table-to-text), is vital for advancing the field. Despite their potential, the application of pre-trained language models (PLMs) like T5 and BERT in DV has been limited by high costs and challenges in handling cross-modal information, leading to few studies on PLMs for DV. We introduce \textbf{DataVisT5}, a novel PLM tailored for DV that enhances the T5 architecture through a hybrid objective pre-training and multi-task fine-tuning strategy, integrating text and DV datasets to effectively interpret cross-modal semantics. Extensive evaluations on public datasets show that DataVisT5 consistently outperforms current state-of-the-art models on various DV-related tasks. We anticipate that DataVisT5 will not only inspire further research on vertical PLMs but also expand the range of applications for PLMs.

TransFlower: An Explainable Transformer-Based Model with Flow-to-Flow Attention for Commuting Flow Prediction

Understanding the link between urban planning and commuting flows is crucial for guiding urban development and policymaking. This research, bridging computer science and urban studies, addresses the challenge of integrating these fields with their distinct focuses. Traditional urban studies methods, like the gravity and radiation models, often underperform in complex scenarios due to their limited handling of multiple variables and reliance on overly simplistic and unrealistic assumptions, such as spatial isotropy. While deep learning models offer improved accuracy, their black-box nature poses a trade-off between performance and explainability -- both vital for analyzing complex societal phenomena like commuting flows. To address this, we introduce TransFlower, an explainable, transformer-based model employing flow-to-flow attention to predict urban commuting patterns. It features a geospatial encoder with an anisotropy-aware relative location encoder for nuanced flow representation. Following this, the transformer-based flow predictor enhances this by leveraging attention mechanisms to efficiently capture flow interactions. Our model outperforms existing methods by up to 30.8% Common Part of Commuters, offering insights into mobility dynamics crucial for urban planning and policy decisions.

Medical Image Debiasing by Learning Adaptive Agreement from a Biased Council

Deep learning could be prone to learning shortcuts raised by dataset bias and result in inaccurate, unreliable, and unfair models, which impedes its adoption in real-world clinical applications. Despite its significance, there is a dearth of research in the medical image classification domain to address dataset bias. Furthermore, the bias labels are often agnostic, as identifying biases can be laborious and depend on post-hoc interpretation. This paper proposes learning Adaptive Agreement from a Biased Council (Ada-ABC), a debiasing framework that does not rely on explicit bias labels to tackle dataset bias in medical images. Ada-ABC develops a biased council consisting of multiple classifiers optimized with generalized cross entropy loss to learn the dataset bias. A debiasing model is then simultaneously trained under the guidance of the biased council. Specifically, the debiasing model is required to learn adaptive agreement with the biased council by agreeing on the correctly predicted samples and disagreeing on the wrongly predicted samples by the biased council. In this way, the debiasing model could learn the target attribute on the samples without spurious correlations while also avoiding ignoring the rich information in samples with spurious correlations. We theoretically demonstrated that the debiasing model could learn the target features when the biased model successfully captures dataset bias. Moreover, to our best knowledge, we constructed the first medical debiasing benchmark from four datasets containing seven different bias scenarios. Our extensive experiments practically showed that our proposed Ada-ABC outperformed competitive approaches, verifying its effectiveness in mitigating dataset bias for medical image classification. The codes and organized benchmark datasets will be made publicly available.

GAEI-UNet: Global Attention and Elastic Interaction U-Net for Vessel Image Segmentation

Vessel image segmentation plays a pivotal role in medical diagnostics, aiding in the early detection and treatment of vascular diseases. While segmentation based on deep learning has shown promising results, effectively segmenting small structures and maintaining connectivity between them remains challenging. To address these limitations, we propose GAEI-UNet, a novel model that combines global attention and elastic interaction-based techniques. GAEI-UNet leverages global spatial and channel context information to enhance high-level semantic understanding within the U-Net architecture, enabling precise segmentation of small vessels. Additionally, we adopt an elastic interaction-based loss function to improve connectivity among these fine structures. By capturing the forces generated by misalignment between target and predicted shapes, our model effectively learns to preserve the correct topology of vessel networks. Evaluation on retinal vessel dataset -- DRIVE demonstrates the superior performance of GAEI-UNet in terms of SE and connectivity of small structures, without significantly increasing computational complexity. This research aims to advance the field of vessel image segmentation, providing more accurate and reliable diagnostic tools for the medical community. The implementation code is available on Code.