MiTREE: Multi-input Transformer Ecoregion Encoder for Species Distribution Modelling

Climate change poses an extreme threat to biodiversity, making it imperative to efficiently model the geographical range of different species. The availability of large-scale remote sensing images and environmental data has facilitated the use of machine learning in Species Distribution Models (SDMs), which aim to predict the presence of a species at any given location. Traditional SDMs, reliant on expert observation, are labor-intensive, but advancements in remote sensing and citizen science data have facilitated machine learning approaches to SDM development. However, these models often struggle with leveraging spatial relationships between different inputs -- for instance, learning how climate data should inform the data present in satellite imagery -- without upsampling or distorting the original inputs. Additionally, location information and ecological characteristics at a location play a crucial role in predicting species distribution models, but these aspects have not yet been incorporated into state-of-the-art approaches. In this work, we introduce MiTREE: a multi-input Vision-Transformer-based model with an ecoregion encoder. MiTREE computes spatial cross-modal relationships without upsampling as well as integrates location and ecological context. We evaluate our model on the SatBird Summer and Winter datasets, the goal of which is to predict bird species encounter rates, and we find that our approach improves upon state-of-the-art baselines.

Context-Aware Trajectory Anomaly Detection

Trajectory anomaly detection is crucial for effective decision-making in urban and human mobility management. Existing methods of trajectory anomaly detection generally focus on training a trajectory generative model and evaluating the likelihood of reconstructing a given trajectory. However, previous work often lacks important contextual information on the trajectory, such as the agent's information (e.g., agent ID) or geographic information (e.g., Points of Interest (POI)), which could provide additional information on accurately capturing anomalous behaviors. To fill this gap, we propose a context-aware anomaly detection approach that models contextual information related to trajectories. The proposed method is based on a trajectory reconstruction framework guided by contextual factors such as agent ID and contextual POI embedding. The injection of contextual information aims to improve the performance of anomaly detection. We conducted experiments in two cities and demonstrated that the proposed approach significantly outperformed existing methods by effectively modeling contextual information. Overall, this paper paves a new direction for advancing trajectory anomaly detection.

Automatic Search of Multiword Place Names on Historical Maps

Historical maps are invaluable sources of information about the past, and scanned historical maps are increasingly accessible in online libraries. To retrieve maps from these large libraries that contain specific places of interest, previous work has applied computer vision techniques to recognize words on historical maps, enabling searches for maps that contain specific place names. However, searching for multiword place names is challenging due to complex layouts of text labels on historical maps. This paper proposes an efficient query method for searching a given multiword place name on historical maps. Using existing methods to recognize words on historical maps, we link single-word text labels into potential multiword phrases by constructing minimum spanning trees. These trees aim to link pairs of text labels that are spatially close and have similar height, angle, and capitalization. We then query these trees for the given multiword place name. We evaluate the proposed method in two experiments: 1) to evaluate the accuracy of the minimum spanning tree approach at linking multiword place names and 2) to evaluate the number and time range of maps retrieved by the query approach. The resulting maps reveal how places using multiword names have changed on a large number of maps from across history.

Anchors Aweigh! Sail for Optimal Unified Multi-Modal Representations

Multimodal learning plays a crucial role in enabling machine learning models to fuse and utilize diverse data sources, such as text, images, and audio, to support a variety of downstream tasks. A unified representation across various modalities is particularly important for improving efficiency and performance. Recent binding methods, such as ImageBind (Girdhar et al., 2023), typically use a fixed anchor modality to align multimodal data in the anchor modal embedding space. In this paper, we mathematically analyze the fixed anchor binding methods and uncover notable limitations: (1) over-reliance on the choice of the anchor modality, (2) failure to capture intra-modal information, and (3) failure to account for inter-modal correlation among non-anchored modalities. To address these limitations, we propose CentroBind, a simple yet powerful approach that eliminates the need for a fixed anchor; instead, it employs dynamically adjustable centroid-based anchors generated from all available modalities, resulting in a balanced and rich representation space. We theoretically demonstrate that our method captures three crucial properties of multimodal learning: intra-modal learning, inter-modal learning, and multimodal alignment, while also constructing a robust unified representation across all modalities. Our experiments on both synthetic and real-world datasets demonstrate the superiority of the proposed method, showing that dynamic anchor methods outperform all fixed anchor binding methods as the former captures more nuanced multimodal interactions.

Dynamic GNNs for Precise Seizure Detection and Classification from EEG Data

Diagnosing epilepsy requires accurate seizure detection and classification, but traditional manual EEG signal analysis is resource-intensive. Meanwhile, automated algorithms often overlook EEG's geometric and semantic properties critical for interpreting brain activity. This paper introduces NeuroGNN, a dynamic Graph Neural Network (GNN) framework that captures the dynamic interplay between the EEG electrode locations and the semantics of their corresponding brain regions. The specific brain region where an electrode is placed critically shapes the nature of captured EEG signals. Each brain region governs distinct cognitive functions, emotions, and sensory processing, influencing both the semantic and spatial relationships within the EEG data. Understanding and modeling these intricate brain relationships are essential for accurate and meaningful insights into brain activity. This is precisely where the proposed NeuroGNN framework excels by dynamically constructing a graph that encapsulates these evolving spatial, temporal, semantic, and taxonomic correlations to improve precision in seizure detection and classification. Our extensive experiments with real-world data demonstrate that NeuroGNN significantly outperforms existing state-of-the-art models.

GeoLM: Empowering Language Models for Geospatially Grounded Language Understanding

Humans subconsciously engage in geospatial reasoning when reading articles. We recognize place names and their spatial relations in text and mentally associate them with their physical locations on Earth. Although pretrained language models can mimic this cognitive process using linguistic context, they do not utilize valuable geospatial information in large, widely available geographical databases, e.g., OpenStreetMap. This paper introduces GeoLM, a geospatially grounded language model that enhances the understanding of geo-entities in natural language. GeoLM leverages geo-entity mentions as anchors to connect linguistic information in text corpora with geospatial information extracted from geographical databases. GeoLM connects the two types of context through contrastive learning and masked language modeling. It also incorporates a spatial coordinate embedding mechanism to encode distance and direction relations to capture geospatial context. In the experiment, we demonstrate that GeoLM exhibits promising capabilities in supporting toponym recognition, toponym linking, relation extraction, and geo-entity typing, which bridge the gap between natural language processing and geospatial sciences. The code is publicly available at https://github.com/knowledge-computing/geolm.

The mapKurator System: A Complete Pipeline for Extracting and Linking Text from Historical Maps

Scanned historical maps in libraries and archives are valuable repositories of geographic data that often do not exist elsewhere. Despite the potential of machine learning tools like the Google Vision APIs for automatically transcribing text from these maps into machine-readable formats, they do not work well with large-sized images (e.g., high-resolution scanned documents), cannot infer the relation between the recognized text and other datasets, and are challenging to integrate with post-processing tools. This paper introduces the mapKurator system, an end-to-end system integrating machine learning models with a comprehensive data processing pipeline. mapKurator empowers automated extraction, post-processing, and linkage of text labels from large numbers of large-dimension historical map scans. The output data, comprising bounding polygons and recognized text, is in the standard GeoJSON format, making it easily modifiable within Geographic Information Systems (GIS). The proposed system allows users to quickly generate valuable data from large numbers of historical maps for in-depth analysis of the map content and, in turn, encourages map findability, accessibility, interoperability, and reusability (FAIR principles). We deployed the mapKurator system and enabled the processing of over 60,000 maps and over 100 million text/place names in the David Rumsey Historical Map collection. We also demonstrated a seamless integration of mapKurator with a collaborative web platform to enable accessing automated approaches for extracting and linking text labels from historical map scans and collective work to improve the results.

Learning Dynamic Graphs from All Contextual Information for Accurate Point-of-Interest Visit Forecasting

Forecasting the number of visits to Points-of-Interest (POI) in an urban area is critical for planning and decision-making for various application domains, from urban planning and transportation management to public health and social studies. Although this forecasting problem can be formulated as a multivariate time-series forecasting task, the current approaches cannot fully exploit the ever-changing multi-context correlations among POIs. Therefore, we propose Busyness Graph Neural Network (BysGNN), a temporal graph neural network designed to learn and uncover the underlying multi-context correlations between POIs for accurate visit forecasting. Unlike other approaches where only time-series data is used to learn a dynamic graph, BysGNN utilizes all contextual information and time-series data to learn an accurate dynamic graph representation. By incorporating all contextual, temporal, and spatial signals, we observe a significant improvement in our forecasting accuracy over state-of-the-art forecasting models in our experiments with real-world datasets across the United States.

Quantile Extreme Gradient Boosting for Uncertainty Quantification

As the availability, size and complexity of data have increased in recent years, machine learning (ML) techniques have become popular for modeling. Predictions resulting from applying ML models are often used for inference, decision-making, and downstream applications. A crucial yet often overlooked aspect of ML is uncertainty quantification, which can significantly impact how predictions from models are used and interpreted. Extreme Gradient Boosting (XGBoost) is one of the most popular ML methods given its simple implementation, fast computation, and sequential learning, which make its predictions highly accurate compared to other methods. However, techniques for uncertainty determination in ML models such as XGBoost have not yet been universally agreed among its varying applications. We propose enhancements to XGBoost whereby a modified quantile regression is used as the objective function to estimate uncertainty (QXGBoost). Specifically, we included the Huber norm in the quantile regression model to construct a differentiable approximation to the quantile regression error function. This key step allows XGBoost, which uses a gradient-based optimization algorithm, to make probabilistic predictions efficiently. QXGBoost was applied to create 90\% prediction intervals for one simulated dataset and one real-world environmental dataset of measured traffic noise. Our proposed method had comparable or better performance than the uncertainty estimates generated for regular and quantile light gradient boosting. For both the simulated and traffic noise datasets, the overall performance of the prediction intervals from QXGBoost were better than other models based on coverage width-based criterion.

Clustering Human Mobility with Multiple Spaces

Human mobility clustering is an important problem for understanding human mobility behaviors (e.g., work and school commutes). Existing methods typically contain two steps: choosing or learning a mobility representation and applying a clustering algorithm to the representation. However, these methods rely on strict visiting orders in trajectories and cannot take advantage of multiple types of mobility representations. This paper proposes a novel mobility clustering method for mobility behavior detection. First, the proposed method contains a permutation-equivalent operation to handle sub-trajectories that might have different visiting orders but similar impacts on mobility behaviors. Second, the proposed method utilizes a variational autoencoder architecture to simultaneously perform clustering in both latent and original spaces. Also, in order to handle the bias of a single latent space, our clustering assignment prediction considers multiple learned latent spaces at different epochs. This way, the proposed method produces accurate results and can provide reliability estimates of each trajectory's cluster assignment. The experiment shows that the proposed method outperformed state-of-the-art methods in mobility behavior detection from trajectories with better accuracy and more interpretability.