DARWIN: A Highly Flexible Platform for Imaging Research in Radiology

To conduct a radiomics or deep learning research experiment, the radiologists or physicians need to grasp the needed programming skills, which, however, could be frustrating and costly when they have limited coding experience. In this paper, we present DARWIN, a flexible research platform with a graphical user interface for medical imaging research. Our platform is consists of a radiomics module and a deep learning module. The radiomics module can extract more than 1000 dimension features(first-, second-, and higher-order) and provided many draggable supervised and unsupervised machine learning models. Our deep learning module integrates state of the art architectures of classification, detection, and segmentation tasks. It allows users to manually select hyperparameters, or choose an algorithm to automatically search for the best ones. DARWIN also offers the possibility for users to define a custom pipeline for their experiment. These flexibilities enable radiologists to carry out various experiments easily.

Improve bone age assessment by learning from anatomical local regions

Skeletal bone age assessment (BAA), as an essential imaging examination, aims at evaluating the biological and structural maturation of human bones. In the clinical practice, Tanner and Whitehouse (TW2) method is a widely-used method for radiologists to perform BAA. The TW2 method splits the hands into Region Of Interests (ROI) and analyzes each of the anatomical ROI separately to estimate the bone age. Because of considering the analysis of local information, the TW2 method shows accurate results in practice. Following the spirit of TW2, we propose a novel model called Anatomical Local-Aware Network (ALA-Net) for automatic bone age assessment. In ALA-Net, anatomical local extraction module is introduced to learn the hand structure and extract local information. Moreover, we design an anatomical patch training strategy to provide extra regularization during the training process. Our model can detect the anatomical ROIs and estimate bone age jointly in an end-to-end manner. The experimental results show that our ALA-Net achieves a new state-of-the-art single model performance of 3.91 mean absolute error (MAE) on the public available RSNA dataset. Since the design of our model is well consistent with the well recognized TW2 method, it is interpretable and reliable for clinical usage.

Accurate Pulmonary Nodule Detection in Computed Tomography Images Using Deep Convolutional Neural Networks

Early detection of pulmonary cancer is the most promising way to enhance a patient's chance for survival. Accurate pulmonary nodule detection in computed tomography (CT) images is a crucial step in diagnosing pulmonary cancer. In this paper, inspired by the successful use of deep convolutional neural networks (DCNNs) in natural image recognition, we propose a novel pulmonary nodule detection approach based on DCNNs. We first introduce a deconvolutional structure to Faster Region-based Convolutional Neural Network (Faster R-CNN) for candidate detection on axial slices. Then, a three-dimensional DCNN is presented for the subsequent false positive reduction. Experimental results of the LUng Nodule Analysis 2016 (LUNA16) Challenge demonstrate the superior detection performance of the proposed approach on nodule detection(average FROC-score of 0.891, ranking the 1st place over all submitted results).