Abstract:Large language models (LLMs) can capture rich representations of concepts that are useful for real-world tasks. However, language alone is limited. While existing LLMs excel at text-based inferences, health applications require that models be grounded in numerical data (e.g., vital signs, laboratory values in clinical domains; steps, movement in the wellness domain) that is not easily or readily expressed as text in existing training corpus. We demonstrate that with only few-shot tuning, a large language model is capable of grounding various physiological and behavioral time-series data and making meaningful inferences on numerous health tasks for both clinical and wellness contexts. Using data from wearable and medical sensor recordings, we evaluate these capabilities on the tasks of cardiac signal analysis, physical activity recognition, metabolic calculation (e.g., calories burned), and estimation of stress reports and mental health screeners.
Abstract:Tremor is a key diagnostic feature of Parkinson's Disease (PD), Essential Tremor (ET), and other central nervous system (CNS) disorders. Clinicians or trained raters assess tremor severity with TETRAS scores by observing patients. Lacking quantitative measures, inter- or intra- observer variabilities are almost inevitable as the distinction between adjacent tremor scores is subtle. Moreover, clinician assessments also require patient visits, which limits the frequency of disease progress evaluation. Therefore it is beneficial to develop an automated assessment that can be performed remotely and repeatably at patients' convenience for continuous monitoring. In this work, we proposed to train a deep neural network (DNN) with rank-consistent ordinal regression using 276 clinical videos from 36 essential tremor patients. The videos are coupled with clinician assessed TETRAS scores, which are used as ground truth labels to train the DNN. To tackle the challenge of limited training data, optical flows are used to eliminate irrelevant background and statistic objects from RGB frames. In addition to optical flows, transfer learning is also applied to leverage pre-trained network weights from a related task of tremor frequency estimate. The approach was evaluated by splitting the clinical videos into training (67%) and testing sets (0.33%). The mean absolute error on TETRAS score of the testing results is 0.45, indicating that most of the errors were from the mismatch of adjacent labels, which is expected and acceptable. The model predications also agree well with clinical ratings. This model is further applied to smart phone videos collected from a PD patient who has an implanted device to turn "On" or "Off" tremor. The model outputs were consistent with the patient tremor states. The results demonstrate that our trained model can be used as a means to assess and track tremor severity.