Precision Cancer Classification and Biomarker Identification from mRNA Gene Expression via Dimensionality Reduction and Explainable AI

Gene expression analysis is a critical method for cancer classification, enabling precise diagnoses through the identification of unique molecular signatures associated with various tumors. Identifying cancer-specific genes from gene expression values enables a more tailored and personalized treatment approach. However, the high dimensionality of mRNA gene expression data poses challenges for analysis and data extraction. This research presents a comprehensive pipeline designed to accurately identify 33 distinct cancer types and their corresponding gene sets. It incorporates a combination of normalization and feature selection techniques to reduce dataset dimensionality effectively while ensuring high performance. Notably, our pipeline successfully identifies a substantial number of cancer-specific genes using a reduced feature set of just 500, in contrast to using the full dataset comprising 19,238 features. By employing an ensemble approach that combines three top-performing classifiers, a classification accuracy of 96.61% was achieved. Furthermore, we leverage Explainable AI to elucidate the biological significance of the identified cancer-specific genes, employing Differential Gene Expression (DGE) analysis.

HaSPeR: An Image Repository for Hand Shadow Puppet Recognition

Hand shadow puppetry, also known as shadowgraphy or ombromanie, is a form of theatrical art and storytelling where hand shadows are projected onto flat surfaces to create illusions of living creatures. The skilled performers create these silhouettes by hand positioning, finger movements, and dexterous gestures to resemble shadows of animals and objects. Due to the lack of practitioners and a seismic shift in people's entertainment standards, this art form is on the verge of extinction. To facilitate its preservation and proliferate it to a wider audience, we introduce ${\rm H{\small A}SP{\small E}R}$, a novel dataset consisting of 8,340 images of hand shadow puppets across 11 classes extracted from both professional and amateur hand shadow puppeteer clips. We provide a detailed statistical analysis of the dataset and employ a range of pretrained image classification models to establish baselines. Our findings show a substantial performance superiority of traditional convolutional models over attention-based transformer architectures. We also find that lightweight models, such as MobileNetV2, suited for mobile applications and embedded devices, perform comparatively well. We surmise that such low-latency architectures can be useful in developing ombromanie teaching tools, and we create a prototype application to explore this surmission. Keeping the best-performing model InceptionV3 under the limelight, we conduct comprehensive feature-spatial, explainability, and error analyses to gain insights into its decision-making process. To the best of our knowledge, this is the first documented dataset and research endeavor to preserve this dying art for future generations, with computer vision approaches. Our code and data are publicly available.

DNN-Defender: An in-DRAM Deep Neural Network Defense Mechanism for Adversarial Weight Attack

With deep learning deployed in many security-sensitive areas, machine learning security is becoming progressively important. Recent studies demonstrate attackers can exploit system-level techniques exploiting the RowHammer vulnerability of DRAM to deterministically and precisely flip bits in Deep Neural Networks (DNN) model weights to affect inference accuracy. The existing defense mechanisms are software-based, such as weight reconstruction requiring expensive training overhead or performance degradation. On the other hand, generic hardware-based victim-/aggressor-focused mechanisms impose expensive hardware overheads and preserve the spatial connection between victim and aggressor rows. In this paper, we present the first DRAM-based victim-focused defense mechanism tailored for quantized DNNs, named DNN-Defender that leverages the potential of in-DRAM swapping to withstand the targeted bit-flip attacks. Our results indicate that DNN-Defender can deliver a high level of protection downgrading the performance of targeted RowHammer attacks to a random attack level. In addition, the proposed defense has no accuracy drop on CIFAR-10 and ImageNet datasets without requiring any software training or incurring additional hardware overhead.

MHfit: Mobile Health Data for Predicting Athletics Fitness Using Machine Learning

Mobile phones and other electronic gadgets or devices have aided in collecting data without the need for data entry. This paper will specifically focus on Mobile health data. Mobile health data use mobile devices to gather clinical health data and track patient vitals in real-time. Our study is aimed to give decisions for small or big sports teams on whether one athlete good fit or not for a particular game with the compare several machine learning algorithms to predict human behavior and health using the data collected from mobile devices and sensors placed on patients. In this study, we have obtained the dataset from a similar study done on mhealth. The dataset contains vital signs recordings of ten volunteers from different backgrounds. They had to perform several physical activities with a sensor placed on their bodies. Our study used 5 machine learning algorithms (XGBoost, Naive Bayes, Decision Tree, Random Forest, and Logistic Regression) to analyze and predict human health behavior. XGBoost performed better compared to the other machine learning algorithms and achieved 95.2% accuracy, 99.5% in sensitivity, 99.5% in specificity, and 99.66% in F1 score. Our research indicated a promising future in mhealth being used to predict human behavior and further research and exploration need to be done for it to be available for commercial use specifically in the sports industry.

An Efficient Transfer Learning-based Approach for Apple Leaf Disease Classification

Correct identification and categorization of plant diseases are crucial for ensuring the safety of the global food supply and the overall financial success of stakeholders. In this regard, a wide range of solutions has been made available by introducing deep learning-based classification systems for different staple crops. Despite being one of the most important commercial crops in many parts of the globe, research proposing a smart solution for automatically classifying apple leaf diseases remains relatively unexplored. This study presents a technique for identifying apple leaf diseases based on transfer learning. The system extracts features using a pretrained EfficientNetV2S architecture and passes to a classifier block for effective prediction. The class imbalance issues are tackled by utilizing runtime data augmentation. The effect of various hyperparameters, such as input resolution, learning rate, number of epochs, etc., has been investigated carefully. The competence of the proposed pipeline has been evaluated on the apple leaf disease subset from the publicly available `PlantVillage' dataset, where it achieved an accuracy of 99.21%, outperforming the existing works.

Huruf: An Application for Arabic Handwritten Character Recognition Using Deep Learning

Handwriting Recognition has been a field of great interest in the Artificial Intelligence domain. Due to its broad use cases in real life, research has been conducted widely on it. Prominent work has been done in this field focusing mainly on Latin characters. However, the domain of Arabic handwritten character recognition is still relatively unexplored. The inherent cursive nature of the Arabic characters and variations in writing styles across individuals makes the task even more challenging. We identified some probable reasons behind this and proposed a lightweight Convolutional Neural Network-based architecture for recognizing Arabic characters and digits. The proposed pipeline consists of a total of 18 layers containing four layers each for convolution, pooling, batch normalization, dropout, and finally one Global average pooling and a Dense layer. Furthermore, we thoroughly investigated the different choices of hyperparameters such as the choice of the optimizer, kernel initializer, activation function, etc. Evaluating the proposed architecture on the publicly available 'Arabic Handwritten Character Dataset (AHCD)' and 'Modified Arabic handwritten digits Database (MadBase)' datasets, the proposed model respectively achieved an accuracy of 96.93% and 99.35% which is comparable to the state-of-the-art and makes it a suitable solution for real-life end-level applications.

Rethinking Cooking State Recognition with Vision Transformers

To ensure proper knowledge representation of the kitchen environment, it is vital for kitchen robots to recognize the states of the food items that are being cooked. Although the domain of object detection and recognition has been extensively studied, the task of object state classification has remained relatively unexplored. The high intra-class similarity of ingredients during different states of cooking makes the task even more challenging. Researchers have proposed adopting Deep Learning based strategies in recent times, however, they are yet to achieve high performance. In this study, we utilized the self-attention mechanism of the Vision Transformer (ViT) architecture for the Cooking State Recognition task. The proposed approach encapsulates the globally salient features from images, while also exploiting the weights learned from a larger dataset. This global attention allows the model to withstand the similarities between samples of different cooking objects, while the employment of transfer learning helps to overcome the lack of inductive bias by utilizing pretrained weights. To improve recognition accuracy, several augmentation techniques have been employed as well. Evaluation of our proposed framework on the `Cooking State Recognition Challenge Dataset' has achieved an accuracy of 94.3%, which significantly outperforms the state-of-the-art.

Performance Analysis of YOLO-based Architectures for Vehicle Detection from Traffic Images in Bangladesh

The task of locating and classifying different types of vehicles has become a vital element in numerous applications of automation and intelligent systems ranging from traffic surveillance to vehicle identification and many more. In recent times, Deep Learning models have been dominating the field of vehicle detection. Yet, Bangladeshi vehicle detection has remained a relatively unexplored area. One of the main goals of vehicle detection is its real-time application, where `You Only Look Once' (YOLO) models have proven to be the most effective architecture. In this work, intending to find the best-suited YOLO architecture for fast and accurate vehicle detection from traffic images in Bangladesh, we have conducted a performance analysis of different variants of the YOLO-based architectures such as YOLOV3, YOLOV5s, and YOLOV5x. The models were trained on a dataset containing 7390 images belonging to 21 types of vehicles comprising samples from the DhakaAI dataset, the Poribohon-BD dataset, and our self-collected images. After thorough quantitative and qualitative analysis, we found the YOLOV5x variant to be the best-suited model, performing better than YOLOv3 and YOLOv5s models respectively by 7 & 4 percent in mAP, and 12 & 8.5 percent in terms of Accuracy.

Fruit Quality Assessment with Densely Connected Convolutional Neural Network

Accurate recognition of food items along with quality assessment is of paramount importance in the agricultural industry. Such automated systems can speed up the wheel of the food processing sector and save tons of manual labor. In this connection, the recent advancement of Deep learning-based architectures has introduced a wide variety of solutions offering remarkable performance in several classification tasks. In this work, we have exploited the concept of Densely Connected Convolutional Neural Networks (DenseNets) for fruit quality assessment. The feature propagation towards the deeper layers has enabled the network to tackle the vanishing gradient problems and ensured the reuse of features to learn meaningful insights. Evaluating on a dataset of 19,526 images containing six fruits having three quality grades for each, the proposed pipeline achieved a remarkable accuracy of 99.67%. The robustness of the model was further tested for fruit classification and quality assessment tasks where the model produced a similar performance, which makes it suitable for real-life applications.

Two Decades of Bengali Handwritten Digit Recognition: A Survey

Handwritten Digit Recognition (HDR) is one of the most challenging tasks in the domain of Optical Character Recognition (OCR). Irrespective of language, there are some inherent challenges of HDR, which mostly arise due to the variations in writing styles across individuals, writing medium and environment, inability to maintain the same strokes while writing any digit repeatedly, etc. In addition to that, the structural complexities of the digits of a particular language may lead to ambiguous scenarios of HDR. Over the years, researchers have developed numerous offline and online HDR pipelines, where different image processing techniques are combined with traditional Machine Learning (ML)-based and/or Deep Learning (DL)-based architectures. Although evidence of extensive review studies on HDR exists in the literature for languages, such as: English, Arabic, Indian, Farsi, Chinese, etc., few surveys on Bengali HDR (BHDR) can be found, which lack a comprehensive analysis of the challenges, the underlying recognition process, and possible future directions. In this paper, the characteristics and inherent ambiguities of Bengali handwritten digits along with a comprehensive insight of two decades of the state-of-the-art datasets and approaches towards offline BHDR have been analyzed. Furthermore, several real-life application-specific studies, which involve BHDR, have also been discussed in detail. This paper will also serve as a compendium for researchers interested in the science behind offline BHDR, instigating the exploration of newer avenues of relevant research that may further lead to better offline recognition of Bengali handwritten digits in different application areas.