HGTDP-DTA: Hybrid Graph-Transformer with Dynamic Prompt for Drug-Target Binding Affinity Prediction

Drug target binding affinity (DTA) is a key criterion for drug screening. Existing experimental methods are time-consuming and rely on limited structural and domain information. While learning-based methods can model sequence and structural information, they struggle to integrate contextual data and often lack comprehensive modeling of drug-target interactions. In this study, we propose a novel DTA prediction method, termed HGTDP-DTA, which utilizes dynamic prompts within a hybrid Graph-Transformer framework. Our method generates context-specific prompts for each drug-target pair, enhancing the model's ability to capture unique interactions. The introduction of prompt tuning further optimizes the prediction process by filtering out irrelevant noise and emphasizing task-relevant information, dynamically adjusting the input features of the molecular graph. The proposed hybrid Graph-Transformer architecture combines structural information from Graph Convolutional Networks (GCNs) with sequence information captured by Transformers, facilitating the interaction between global and local information. Additionally, we adopted the multi-view feature fusion method to project molecular graph views and affinity subgraph views into a common feature space, effectively combining structural and contextual information. Experiments on two widely used public datasets, Davis and KIBA, show that HGTDP-DTA outperforms state-of-the-art DTA prediction methods in both prediction performance and generalization ability.

SKGHOI: Spatial-Semantic Knowledge Graph for Human-Object Interaction Detection

Detecting human-object interactions (HOIs) is a challenging problem in computer vision. Existing techniques for HOI detection heavily rely on appearance-based features, which may not capture other essential characteristics for accurate detection. Furthermore, the use of transformer-based models for sentiment representation of human-object pairs can be computationally expensive. To address these challenges, we propose a novel graph-based approach, SKGHOI (Spatial-Semantic Knowledge Graph for Human-Object Interaction Detection), that effectively captures the sentiment representation of HOIs by integrating both spatial and semantic knowledge. In a graph, SKGHOI takes the components of interaction as nodes, and the spatial relationships between them as edges. Our approach employs a spatial encoder and a semantic encoder to extract spatial and semantic information, respectively, and then combines these encodings to create a knowledge graph that captures the sentiment representation of HOIs. Compared to existing techniques, SKGHOI is computationally efficient and allows for the incorporation of prior knowledge, making it practical for use in real-world applications. We demonstrate the effectiveness of our proposed method on the widely-used HICO-DET datasets, where it outperforms existing state-of-the-art graph-based methods by a significant margin. Our results indicate that the SKGHOI approach has the potential to significantly improve the accuracy and efficiency of HOI detection, and we anticipate that it will be of great interest to researchers and practitioners working on this challenging task.