Efficient Curation of Invertebrate Image Datasets Using Feature Embeddings and Automatic Size Comparison

The amount of image datasets collected for environmental monitoring purposes has increased in the past years as computer vision assisted methods have gained interest. Computer vision applications rely on high-quality datasets, making data curation important. However, data curation is often done ad-hoc and the methods used are rarely published. We present a method for curating large-scale image datasets of invertebrates that contain multiple images of the same taxa and/or specimens and have relatively uniform background in the images. Our approach is based on extracting feature embeddings with pretrained deep neural networks, and using these embeddings to find visually most distinct images by comparing their embeddings to the group prototype embedding. Also, we show that a simple area-based size comparison approach is able to find a lot of common erroneous images, such as images containing detached body parts and misclassified samples. In addition to the method, we propose using novel metrics for evaluating human-in-the-loop outlier detection methods. The implementations of the proposed curation methods, as well as a benchmark dataset containing annotated erroneous images, are publicly available in https://github.com/mikkoim/taxonomist-studio.

Linear-time One-Class Classification with Repeated Element-wise Folding

This paper proposes an easy-to-use method for one-class classification: Repeated Element-wise Folding (REF). The algorithm consists of repeatedly standardizing and applying an element-wise folding operation on the one-class training data. Equivalent mappings are performed on unknown test items and the classification prediction is based on the item's distance to the origin of the final distribution. As all the included operations have linear time complexity, the proposed algorithm provides a linear-time alternative for the commonly used computationally much more demanding approaches. Furthermore, REF can avoid the challenges of hyperparameter setting in one-class classification by providing robust default settings. The experiments show that the proposed method can produce similar classification performance or even outperform the more complex algorithms on various benchmark datasets. Matlab codes for REF are publicly available at https://github.com/JenniRaitoharju/REF.

Improving Taxonomic Image-based Out-of-distribution Detection With DNA Barcodes

Image-based species identification could help scaling biodiversity monitoring to a global scale. Many challenges still need to be solved in order to implement these systems in real-world applications. A reliable image-based monitoring system must detect out-of-distribution (OOD) classes it has not been presented before. This is challenging especially with fine-grained classes. Emerging environmental monitoring techniques, DNA metabarcoding and eDNA, can help by providing information on OOD classes that are present in a sample. In this paper, we study if DNA barcodes can also support in finding the outlier images based on the outlier DNA sequence's similarity to the seen classes. We propose a re-ordering approach that can be easily applied on any pre-trained models and existing OOD detection methods. We experimentally show that the proposed approach improves taxonomic OOD detection compared to all common baselines. We also show that the method works thanks to a correlation between visual similarity and DNA barcode proximity. The code and data are available at https://github.com/mikkoim/dnaimg-ood.

Convolutional autoencoder-based multimodal one-class classification

One-class classification refers to approaches of learning using data from a single class only. In this paper, we propose a deep learning one-class classification method suitable for multimodal data, which relies on two convolutional autoencoders jointly trained to reconstruct the positive input data while obtaining the data representations in the latent space as compact as possible. During inference, the distance of the latent representation of an input to the origin can be used as an anomaly score. Experimental results using a multimodal macroinvertebrate image classification dataset show that the proposed multimodal method yields better results as compared to the unimodal approach. Furthermore, study the effect of different input image sizes, and we investigate how recently proposed feature diversity regularizers affect the performance of our approach. We show that such regularizers improve performance.

On Feature Diversity in Energy-based Models

Energy-based learning is a powerful learning paradigm that encapsulates various discriminative and generative approaches. An energy-based model (EBM) is typically formed of inner-model(s) that learn a combination of the different features to generate an energy mapping for each input configuration. In this paper, we focus on the diversity of the produced feature set. We extend the probably approximately correct (PAC) theory of EBMs and analyze the effect of redundancy reduction on the performance of EBMs. We derive generalization bounds for various learning contexts, i.e., regression, classification, and implicit regression, with different energy functions and we show that indeed reducing redundancy of the feature set can consistently decrease the gap between the true and empirical expectation of the energy and boosts the performance of the model.

WLD-Reg: A Data-dependent Within-layer Diversity Regularizer

Neural networks are composed of multiple layers arranged in a hierarchical structure jointly trained with a gradient-based optimization, where the errors are back-propagated from the last layer back to the first one. At each optimization step, neurons at a given layer receive feedback from neurons belonging to higher layers of the hierarchy. In this paper, we propose to complement this traditional 'between-layer' feedback with additional 'within-layer' feedback to encourage the diversity of the activations within the same layer. To this end, we measure the pairwise similarity between the outputs of the neurons and use it to model the layer's overall diversity. We present an extensive empirical study confirming that the proposed approach enhances the performance of several state-of-the-art neural network models in multiple tasks. The code is publically available at \url{https://github.com/firasl/AAAI-23-WLD-Reg}

1st Workshop on Maritime Computer Vision 2023: Challenge Results

The 1$^{\text{st}}$ Workshop on Maritime Computer Vision (MaCVi) 2023 focused on maritime computer vision for Unmanned Aerial Vehicles (UAV) and Unmanned Surface Vehicle (USV), and organized several subchallenges in this domain: (i) UAV-based Maritime Object Detection, (ii) UAV-based Maritime Object Tracking, (iii) USV-based Maritime Obstacle Segmentation and (iv) USV-based Maritime Obstacle Detection. The subchallenges were based on the SeaDronesSee and MODS benchmarks. This report summarizes the main findings of the individual subchallenges and introduces a new benchmark, called SeaDronesSee Object Detection v2, which extends the previous benchmark by including more classes and footage. We provide statistical and qualitative analyses, and assess trends in the best-performing methodologies of over 130 submissions. The methods are summarized in the appendix. The datasets, evaluation code and the leaderboard are publicly available at https://seadronessee.cs.uni-tuebingen.de/macvi.

Computer Vision on X-ray Data in Industrial Production and Security Applications: A survey

X-ray imaging technology has been used for decades in clinical tasks to reveal the internal condition of different organs, and in recent years, it has become more common in other areas such as industry, security, and geography. The recent development of computer vision and machine learning techniques has also made it easier to automatically process X-ray images and several machine learning-based object (anomaly) detection, classification, and segmentation methods have been recently employed in X-ray image analysis. Due to the high potential of deep learning in related image processing applications, it has been used in most of the studies. This survey reviews the recent research on using computer vision and machine learning for X-ray analysis in industrial production and security applications and covers the applications, techniques, evaluation metrics, datasets, and performance comparison of those techniques on publicly available datasets. We also highlight some drawbacks in the published research and give recommendations for future research in computer vision-based X-ray analysis.

Habitat classification from satellite observations with sparse annotations

Remote sensing benefits habitat conservation by making monitoring of large areas easier compared to field surveying especially if the remote sensed data can be automatically analyzed. An important aspect of monitoring is classifying and mapping habitat types present in the monitored area. Automatic classification is a difficult task, as classes have fine-grained differences and their distributions are long-tailed and unbalanced. Usually training data used for automatic land cover classification relies on fully annotated segmentation maps, annotated from remote sensed imagery to a fairly high-level taxonomy, i.e., classes such as forest, farmland, or urban area. A challenge with automatic habitat classification is that reliable data annotation requires field-surveys. Therefore, full segmentation maps are expensive to produce, and training data is often sparse, point-like, and limited to areas accessible by foot. Methods for utilizing these limited data more efficiently are needed. We address these problems by proposing a method for habitat classification and mapping, and apply this method to classify the entire northern Finnish Lapland area into Natura2000 classes. The method is characterized by using finely-grained, sparse, single-pixel annotations collected from the field, combined with large amounts of unannotated data to produce segmentation maps. Supervised, unsupervised and semi-supervised methods are compared, and the benefits of transfer learning from a larger out-of-domain dataset are demonstrated. We propose a \ac{CNN} biased towards center pixel classification ensembled with a random forest classifier, that produces higher quality classifications than the models themselves alone. We show that cropping augmentations, test-time augmentation and semi-supervised learning can help classification even further.

Efficient CNN with uncorrelated Bag of Features pooling

Despite the superior performance of CNN, deploying them on low computational power devices is still limited as they are typically computationally expensive. One key cause of the high complexity is the connection between the convolution layers and the fully connected layers, which typically requires a high number of parameters. To alleviate this issue, Bag of Features (BoF) pooling has been recently proposed. BoF learns a dictionary, that is used to compile a histogram representation of the input. In this paper, we propose an approach that builds on top of BoF pooling to boost its efficiency by ensuring that the items of the learned dictionary are non-redundant. We propose an additional loss term, based on the pair-wise correlation of the items of the dictionary, which complements the standard loss to explicitly regularize the model to learn a more diverse and rich dictionary. The proposed strategy yields an efficient variant of BoF and further boosts its performance, without any additional parameters.