Abstract:Distributed Denial of Service (DDoS) attacks pose a significant threat to the stability and reliability of online systems. Effective and early detection of such attacks is pivotal for safeguarding the integrity of networks. In this work, we introduce an enhanced approach for DDoS attack detection by leveraging the capabilities of Deep Residual Neural Networks (ResNets) coupled with synthetic oversampling techniques. Because of the inherent class imbalance in many cyber-security datasets, conventional methods often struggle with false negatives, misclassifying subtle DDoS patterns as benign. By applying the Synthetic Minority Over-sampling Technique (SMOTE) to the CICIDS dataset, we balance the representation of benign and malicious data points, enabling the model to better discern intricate patterns indicative of an attack. Our deep residual network, tailored for this specific task, further refines the detection process. Experimental results on a real-world dataset demonstrate that our approach achieves an accuracy of 99.98%, significantly outperforming traditional methods. This work underscores the potential of combining advanced data augmentation techniques with deep learning models to bolster cyber-security defenses.
Abstract:DNA N6-methylation (6mA) in Adenine nucleotide is a post replication modification and is responsible for many biological functions. Experimental methods for genome wide 6mA site detection is an expensive and manual labour intensive process. Automated and accurate computational methods can help to identify 6mA sites in long genomes saving significant time and money. Our study develops a convolutional neural network based tool i6mA-CNN capable of identifying 6mA sites in the rice genome. Our model coordinates among multiple types of features such as PseAAC inspired customized feature vector, multiple one hot representations and dinucleotide physicochemical properties. It achieves area under the receiver operating characteristic curve of 0.98 with an overall accuracy of 0.94 using 5 fold cross validation on benchmark dataset. Finally, we evaluate our model on two other plant genome 6mA site identification datasets besides rice. Results suggest that our proposed tool is able to generalize its ability of 6mA site identification on plant genomes irrespective of plant species. Web tool for this research can be found at: https://cutt.ly/Co6KuWG. Supplementary data (benchmark dataset, independent test dataset, comparison purpose dataset, trained model, physicochemical property values, attention mechanism details for motif finding) are available at https://cutt.ly/PpDdeDH.
Abstract:Promoter is a short region of DNA which is responsible for initiating transcription of specific genes. Development of computational tools for automatic identification of promoters is in high demand. According to the difference of functions, promoters can be of different types. Promoters may have both intra and inter class variation and similarity in terms of consensus sequences. Accurate classification of various types of sigma promoters still remains a challenge. We present iPromoter-BnCNN for identification and accurate classification of six types of promoters - sigma24, sigma28, sigma32, sigma38, sigma54, sigma70. It is a Convolutional Neural Network (CNN) based classifier which combines local features related to monomer nucleotide sequence, trimer nucleotide sequence, dimer structural properties and trimer structural properties through the use of parallel branching. We conducted experiments on a benchmark dataset and compared with two state-of-the-art tools to show our supremacy on 5-fold cross-validation. Moreover, we tested our classifier on an independent test dataset. Our proposed tool iPromoter-BnCNN along with the source code is freely available at https://cutt.ly/te6XISV.
Abstract:Question classification (QC) is the primary step of the Question Answering (QA) system. Question Classification (QC) system classifies the questions in particular classes so that Question Answering (QA) System can provide correct answers for the questions. Our system categorizes the factoid type questions asked in natural language after extracting features of the questions. We present a two stage QC system for Bengali. It utilizes one dimensional convolutional neural network for classifying questions into coarse classes in the first stage. Word2vec representation of existing words of the question corpus have been constructed and used for assisting 1D CNN. A smart data balancing technique has been employed for giving data hungry convolutional neural network the advantage of a greater number of effective samples to learn from. For each coarse class, a separate Stochastic Gradient Descent (SGD) based classifier has been used in order to differentiate among the finer classes within that coarse class. TF-IDF representation of each word has been used as feature for the SGD classifiers implemented as part of second stage classification. Experiments show the effectiveness of our proposed method for Bengali question classification.