Increasing the Robustness of Model Predictions to Missing Sensors in Earth Observation

Multi-sensor ML models for EO aim to enhance prediction accuracy by integrating data from various sources. However, the presence of missing data poses a significant challenge, particularly in non-persistent sensors that can be affected by external factors. Existing literature has explored strategies like temporal dropout and sensor-invariant models to address the generalization to missing data issues. Inspired by these works, we study two novel methods tailored for multi-sensor scenarios, namely Input Sensor Dropout (ISensD) and Ensemble Sensor Invariant (ESensI). Through experimentation on three multi-sensor temporal EO datasets, we demonstrate that these methods effectively increase the robustness of model predictions to missing sensors. Particularly, we focus on how the predictive performance of models drops when sensors are missing at different levels. We observe that ensemble multi-sensor models are the most robust to the lack of sensors. In addition, the sensor dropout component in ISensD shows promising robustness results.

XAI-Guided Enhancement of Vegetation Indices for Crop Mapping

Vegetation indices allow to efficiently monitor vegetation growth and agricultural activities. Previous generations of satellites were capturing a limited number of spectral bands, and a few expert-designed vegetation indices were sufficient to harness their potential. New generations of multi- and hyperspectral satellites can however capture additional bands, but are not yet efficiently exploited. In this work, we propose an explainable-AI-based method to select and design suitable vegetation indices. We first train a deep neural network using multispectral satellite data, then extract feature importance to identify the most influential bands. We subsequently select suitable existing vegetation indices or modify them to incorporate the identified bands and retrain our model. We validate our approach on a crop classification task. Our results indicate that models trained on individual indices achieve comparable results to the baseline model trained on all bands, while the combination of two indices surpasses the baseline in certain cases.

In the Search for Optimal Multi-view Learning Models for Crop Classification with Global Remote Sensing Data

Crop classification is of critical importance due to its role in studying crop pattern changes, resource management, and carbon sequestration. When employing data-driven techniques for its prediction, utilizing various temporal data sources is necessary. Deep learning models have proven to be effective for this task by mapping time series data to high-level representation for prediction. However, they face substantial challenges when dealing with multiple input patterns. The literature offers limited guidance for Multi-View Learning (MVL) scenarios, as it has primarily focused on exploring fusion strategies with specific encoders and validating them in local regions. In contrast, we investigate the impact of simultaneous selection of the fusion strategy and the encoder architecture evaluated on a global-scale cropland and crop-type classifications. We use a range of five fusion strategies (Input, Feature, Decision, Ensemble, Hybrid) and five temporal encoder architectures (LSTM, GRU, TempCNN, TAE, L-TAE) as possible MVL model configurations. The validation is on the CropHarvest dataset that provides optical, radar, and weather time series, and topographic information as input data. We found that in scenarios with a limited number of labeled samples, a unique configuration is insufficient for all the cases. Instead, a specialized combination, including encoder and fusion strategy, should be meticulously sought. To streamline this search process, we suggest initially identifying the optimal encoder architecture tailored for a particular fusion strategy, and then determining the most suitable fusion strategy for the classification task. We provide a technical framework for researchers exploring crop classification or related tasks through a MVL approach.

Impact Assessment of Missing Data in Model Predictions for Earth Observation Applications

Earth observation (EO) applications involving complex and heterogeneous data sources are commonly approached with machine learning models. However, there is a common assumption that data sources will be persistently available. Different situations could affect the availability of EO sources, like noise, clouds, or satellite mission failures. In this work, we assess the impact of missing temporal and static EO sources in trained models across four datasets with classification and regression tasks. We compare the predictive quality of different methods and find that some are naturally more robust to missing data. The Ensemble strategy, in particular, achieves a prediction robustness up to 100%. We evidence that missing scenarios are significantly more challenging in regression than classification tasks. Finally, we find that the optical view is the most critical view when it is missing individually.

Adaptive Fusion of Multi-view Remote Sensing data for Optimal Sub-field Crop Yield Prediction

Accurate crop yield prediction is of utmost importance for informed decision-making in agriculture, aiding farmers, and industry stakeholders. However, this task is complex and depends on multiple factors, such as environmental conditions, soil properties, and management practices. Combining heterogeneous data views poses a fusion challenge, like identifying the view-specific contribution to the predictive task. We present a novel multi-view learning approach to predict crop yield for different crops (soybean, wheat, rapeseed) and regions (Argentina, Uruguay, and Germany). Our multi-view input data includes multi-spectral optical images from Sentinel-2 satellites and weather data as dynamic features during the crop growing season, complemented by static features like soil properties and topographic information. To effectively fuse the data, we introduce a Multi-view Gated Fusion (MVGF) model, comprising dedicated view-encoders and a Gated Unit (GU) module. The view-encoders handle the heterogeneity of data sources with varying temporal resolutions by learning a view-specific representation. These representations are adaptively fused via a weighted sum. The fusion weights are computed for each sample by the GU using a concatenation of the view-representations. The MVGF model is trained at sub-field level with 10 m resolution pixels. Our evaluations show that the MVGF outperforms conventional models on the same task, achieving the best results by incorporating all the data sources, unlike the usual fusion results in the literature. For Argentina, the MVGF model achieves an R2 value of 0.68 at sub-field yield prediction, while at field level evaluation (comparing field averages), it reaches around 0.80 across different countries. The GU module learned different weights based on the country and crop-type, aligning with the variable significance of each data source to the prediction task.

Predicting Crop Yield With Machine Learning: An Extensive Analysis Of Input Modalities And Models On a Field and sub-field Level

We introduce a simple yet effective early fusion method for crop yield prediction that handles multiple input modalities with different temporal and spatial resolutions. We use high-resolution crop yield maps as ground truth data to train crop and machine learning model agnostic methods at the sub-field level. We use Sentinel-2 satellite imagery as the primary modality for input data with other complementary modalities, including weather, soil, and DEM data. The proposed method uses input modalities available with global coverage, making the framework globally scalable. We explicitly highlight the importance of input modalities for crop yield prediction and emphasize that the best-performing combination of input modalities depends on region, crop, and chosen model.

A Comparative Assessment of Multi-view fusion learning for Crop Classification

With a rapidly increasing amount and diversity of remote sensing (RS) data sources, there is a strong need for multi-view learning modeling. This is a complex task when considering the differences in resolution, magnitude, and noise of RS data. The typical approach for merging multiple RS sources has been input-level fusion, but other - more advanced - fusion strategies may outperform this traditional approach. This work assesses different fusion strategies for crop classification in the CropHarvest dataset. The fusion methods proposed in this work outperform models based on individual views and previous fusion methods. We do not find one single fusion method that consistently outperforms all other approaches. Instead, we present a comparison of multi-view fusion methods for three different datasets and show that, depending on the test region, different methods obtain the best performance. Despite this, we suggest a preliminary criterion for the selection of fusion methods.

Common Practices and Taxonomy in Deep Multi-view Fusion for Remote Sensing Applications

The advances in remote sensing technologies have boosted applications for Earth observation. These technologies provide multiple observations or views with different levels of information. They might contain static or temporary views with different levels of resolution, in addition to having different types and amounts of noise due to sensor calibration or deterioration. A great variety of deep learning models have been applied to fuse the information from these multiple views, known as deep multi-view or multi-modal fusion learning. However, the approaches in the literature vary greatly since different terminology is used to refer to similar concepts or different illustrations are given to similar techniques. This article gathers works on multi-view fusion for Earth observation by focusing on the common practices and approaches used in the literature. We summarize and structure insights from several different publications concentrating on unifying points and ideas. In this manuscript, we provide a harmonized terminology while at the same time mentioning the various alternative terms that are used in literature. The topics covered by the works reviewed focus on supervised learning with the use of neural network models. We hope this review, with a long list of recent references, can support future research and lead to a unified advance in the area.

Self-Supervised Bernoulli Autoencoders for Semi-Supervised Hashing

Semantic hashing is an emerging technique for large-scale similarity search based on representing high-dimensional data using similarity-preserving binary codes used for efficient indexing and search. It has recently been shown that variational autoencoders, with Bernoulli latent representations parametrized by neural nets, can be successfully trained to learn such codes in supervised and unsupervised scenarios, improving on more traditional methods thanks to their ability to handle the binary constraints architecturally. However, the scenario where labels are scarce has not been studied yet. This paper investigates the robustness of hashing methods based on variational autoencoders to the lack of supervision, focusing on two semi-supervised approaches currently in use. The first augments the variational autoencoder's training objective to jointly model the distribution over the data and the class labels. The second approach exploits the annotations to define an additional pairwise loss that enforces consistency between the similarity in the code (Hamming) space and the similarity in the label space. Our experiments show that both methods can significantly increase the hash codes' quality. The pairwise approach can exhibit an advantage when the number of labelled points is large. However, we found that this method degrades quickly and loses its advantage when labelled samples decrease. To circumvent this problem, we propose a novel supervision method in which the model uses its label distribution predictions to implement the pairwise objective. Compared to the best baseline, this procedure yields similar performance in fully supervised settings but improves the results significantly when labelled data is scarce. Our code is made publicly available at https://github.com/amacaluso/SSB-VAE.