Graph Neural Networks for Edge Signals: Orientation Equivariance and Invariance

Many applications in traffic, civil engineering, or electrical engineering revolve around edge-level signals. Such signals can be categorized as inherently directed, for example, the water flow in a pipe network, and undirected, like the diameter of a pipe. Topological methods model edge signals with inherent direction by representing them relative to a so-called orientation assigned to each edge. These approaches can neither model undirected edge signals nor distinguish if an edge itself is directed or undirected. We address these shortcomings by (i) revising the notion of orientation equivariance to enable edge direction-aware topological models, (ii) proposing orientation invariance as an additional requirement to describe signals without inherent direction, and (iii) developing EIGN, an architecture composed of novel direction-aware edge-level graph shift operators, that provably fulfills the aforementioned desiderata. It is the first general-purpose topological GNN for edge-level signals that can model directed and undirected signals while distinguishing between directed and undirected edges. A comprehensive evaluation shows that EIGN outperforms prior work in edge-level tasks, for example, improving in RMSE on flow simulation tasks by up to 43.5%.

Energy-based Epistemic Uncertainty for Graph Neural Networks

In domains with interdependent data, such as graphs, quantifying the epistemic uncertainty of a Graph Neural Network (GNN) is challenging as uncertainty can arise at different structural scales. Existing techniques neglect this issue or only distinguish between structure-aware and structure-agnostic uncertainty without combining them into a single measure. We propose GEBM, an energy-based model (EBM) that provides high-quality uncertainty estimates by aggregating energy at different structural levels that naturally arise from graph diffusion. In contrast to logit-based EBMs, we provably induce an integrable density in the data space by regularizing the energy function. We introduce an evidential interpretation of our EBM that significantly improves the predictive robustness of the GNN. Our framework is a simple and effective post hoc method applicable to any pre-trained GNN that is sensitive to various distribution shifts. It consistently achieves the best separation of in-distribution and out-of-distribution data on 6 out of 7 anomaly types while having the best average rank over shifts on \emph{all} datasets.

Uncertainty for Active Learning on Graphs

Uncertainty Sampling is an Active Learning strategy that aims to improve the data efficiency of machine learning models by iteratively acquiring labels of data points with the highest uncertainty. While it has proven effective for independent data its applicability to graphs remains under-explored. We propose the first extensive study of Uncertainty Sampling for node classification: (1) We benchmark Uncertainty Sampling beyond predictive uncertainty and highlight a significant performance gap to other Active Learning strategies. (2) We develop ground-truth Bayesian uncertainty estimates in terms of the data generating process and prove their effectiveness in guiding Uncertainty Sampling toward optimal queries. We confirm our results on synthetic data and design an approximate approach that consistently outperforms other uncertainty estimators on real datasets. (3) Based on this analysis, we relate pitfalls in modeling uncertainty to existing methods. Our analysis enables and informs the development of principled uncertainty estimation on graphs.