This paper introduces a novel probabilistic mapping algorithm, Latent BKI, which enables open-vocabulary mapping with quantifiable uncertainty. Traditionally, semantic mapping algorithms focus on a fixed set of semantic categories which limits their applicability for complex robotic tasks. Vision-Language (VL) models have recently emerged as a technique to jointly model language and visual features in a latent space, enabling semantic recognition beyond a predefined, fixed set of semantic classes. Latent BKI recurrently incorporates neural embeddings from VL models into a voxel map with quantifiable uncertainty, leveraging the spatial correlations of nearby observations through Bayesian Kernel Inference (BKI). Latent BKI is evaluated against similar explicit semantic mapping and VL mapping frameworks on the popular MatterPort-3D and Semantic KITTI data sets, demonstrating that Latent BKI maintains the probabilistic benefits of continuous mapping with the additional benefit of open-dictionary queries. Real-world experiments demonstrate applicability to challenging indoor environments.