In this paper, we propose a novel joint intelligent trajectory design and resource allocation algorithm based on user's mobility and their requested services for unmanned aerial vehicles (UAVs) assisted networks, where UAVs act as nodes of a network function virtualization (NFV) enabled network. Our objective is to maximize energy efficiency and minimize the average delay on all services by allocating the limited radio and NFV resources. In addition, due to the traffic conditions and mobility of users, we let some Virtual Network Functions (VNFs) to migrate from their current locations to other locations to satisfy the Quality of Service requirements. We formulate our problem to find near-optimal locations of UAVs, transmit power, subcarrier assignment, placement, and scheduling the requested service's functions over the UAVs and perform suitable VNF migration. Then we propose a novel Hierarchical Hybrid Continuous and Discrete Action (HHCDA) deep reinforcement learning method to solve our problem. Finally, the convergence and computational complexity of the proposed algorithm and its performance analyzed for different parameters. Simulation results show that our proposed HHCDA method decreases the request reject rate and average delay by 31.5% and 20% and increases the energy efficiency by 40% compared to DDPG method.