HyperGraphRAG: Retrieval-Augmented Generation with Hypergraph-Structured Knowledge Representation

While standard Retrieval-Augmented Generation (RAG) based on chunks, GraphRAG structures knowledge as graphs to leverage the relations among entities. However, previous GraphRAG methods are limited by binary relations: one edge in the graph only connects two entities, which cannot well model the n-ary relations among more than two entities that widely exist in reality. To address this limitation, we propose HyperGraphRAG, a novel hypergraph-based RAG method that represents n-ary relational facts via hyperedges, modeling the complicated n-ary relations in the real world. To retrieve and generate over hypergraphs, we introduce a complete pipeline with a hypergraph construction method, a hypergraph retrieval strategy, and a hypergraph-guided generation mechanism. Experiments across medicine, agriculture, computer science, and law demonstrate that HyperGraphRAG outperforms standard RAG and GraphRAG in accuracy and generation quality.