Cell Phantom Video Generation in Elliptical Fourier Descriptor Domain

Training Deep Neural Networks for tracking individual cells in biomedical videos requires a large amount of annotated data. The annotation of videos for cell tracking is very time consuming and often requires domain expertise; this explains the limited availability of public annotated data to address important medical problems like tissue repair or cancer treatment. Generating synthetic videos along with their Ground Truth annotations is a promising solution that relies, as a foundational first step, on the synthesis of single cell annotations (or phantoms). Phantoms need to be time consistent, as they have to replicate biological processes that are specific to the cell types. In this work, we propose a novel framework for generating videos of cell phantoms in the Elliptical Fourier Descriptors (EFDs) domain, a compact and geometrically interpretable representation for 2D closed contours. We represent the cell phantom evolution as a multivariate time series of EFD coefficients, introducing a strong prior for cell morphology and enabling the efficient generation of sequences that evolve coherently in time. Our experimental validation proves that modelling the temporal evolution in EFD space enables the generation of biologically plausible phantom videos. Our method can be used in generative pipelines for synthesizing annotated data for cell tracking, thus strongly mitigating the annotation effort for creating new datasets. Our code is available for download here: https://github.com/FrancescoBenedetto99/efd-cell-video-gen.

Latent attention on masked patches for flow reconstruction

Vision transformers have demonstrated outstanding performance on image generation applications, but their adoption in scientific disciplines, like fluid dynamics, has been limited. We introduce the Latent Attention on Masked Patches (LAMP) model, an interpretable regression-based modified vision transformer designed for masked flow reconstruction. LAMP follows a three-fold strategy: (i) partition of each flow snapshot into patches, (ii) dimensionality reduction of each patch via patch-wise proper orthogonal decomposition, and (iii) reconstruction of the full field from a masked input using a single-layer transformer trained via closed-form linear regression. We test the method on two canonical 2D unsteady wakes: a wake past a bluff body, and a chaotic wake past a flat plate. We show that the LAMP accurately reconstructs the full flow field from a 90\%-masked and noisy input, across signal-to-noise ratios between 10 and 30\,dB. Incorporating nonlinear measurement states can reduce the prediction error by up to an order of magnitude. The learned attention matrix yields physically interpretable multi-fidelity optimal sensor-placement maps. The modularity of the framework enables nonlinear compression and deep attention blocks, thereby providing an efficient baseline for nonlinear and high-dimensional masked flow reconstruction.

Efficient Real-Time Adaptation of ROMs for Unsteady Flows Using Data Assimilation

We propose an efficient retraining strategy for a parameterized Reduced Order Model (ROM) that attains accuracy comparable to full retraining while requiring only a fraction of the computational time and relying solely on sparse observations of the full system. The architecture employs an encode-process-decode structure: a Variational Autoencoder (VAE) to perform dimensionality reduction, and a transformer network to evolve the latent states and model the dynamics. The ROM is parameterized by an external control variable, the Reynolds number in the Navier-Stokes setting, with the transformer exploiting attention mechanisms to capture both temporal dependencies and parameter effects. The probabilistic VAE enables stochastic sampling of trajectory ensembles, providing predictive means and uncertainty quantification through the first two moments. After initial training on a limited set of dynamical regimes, the model is adapted to out-of-sample parameter regions using only sparse data. Its probabilistic formulation naturally supports ensemble generation, which we employ within an ensemble Kalman filtering framework to assimilate data and reconstruct full-state trajectories from minimal observations. We further show that, for the dynamical system considered, the dominant source of error in out-of-sample forecasts stems from distortions of the latent manifold rather than changes in the latent dynamics. Consequently, retraining can be limited to the autoencoder, allowing for a lightweight, computationally efficient, real-time adaptation procedure with very sparse fine-tuning data.

LCF3D: A Robust and Real-Time Late-Cascade Fusion Framework for 3D Object Detection in Autonomous Driving

Accurately localizing 3D objects like pedestrians, cyclists, and other vehicles is essential in Autonomous Driving. To ensure high detection performance, Autonomous Vehicles complement RGB cameras with LiDAR sensors, but effectively combining these data sources for 3D object detection remains challenging. We propose LCF3D, a novel sensor fusion framework that combines a 2D object detector on RGB images with a 3D object detector on LiDAR point clouds. By leveraging multimodal fusion principles, we compensate for inaccuracies in the LiDAR object detection network. Our solution combines two key principles: (i) late fusion, to reduce LiDAR False Positives by matching LiDAR 3D detections with RGB 2D detections and filtering out unmatched LiDAR detections; and (ii) cascade fusion, to recover missed objects from LiDAR by generating new 3D frustum proposals corresponding to unmatched RGB detections. Experiments show that LCF3D is beneficial for domain generalization, as it turns out to be successful in handling different sensor configurations between training and testing domains. LCF3D achieves significant improvements over LiDAR-based methods, particularly for challenging categories like pedestrians and cyclists in the KITTI dataset, as well as motorcycles and bicycles in nuScenes. Code can be downloaded from: https://github.com/CarloSgaravatti/LCF3D.

One target to align them all: LiDAR, RGB and event cameras extrinsic calibration for Autonomous Driving

We present a novel multi-modal extrinsic calibration framework designed to simultaneously estimate the relative poses between event cameras, LiDARs, and RGB cameras, with particular focus on the challenging event camera calibration. Core of our approach is a novel 3D calibration target, specifically designed and constructed to be concurrently perceived by all three sensing modalities. The target encodes features in planes, ChArUco, and active LED patterns, each tailored to the unique characteristics of LiDARs, RGB cameras, and event cameras respectively. This unique design enables a one-shot, joint extrinsic calibration process, in contrast to existing approaches that typically rely on separate, pairwise calibrations. Our calibration pipeline is designed to accurately calibrate complex vision systems in the context of autonomous driving, where precise multi-sensor alignment is critical. We validate our approach through an extensive experimental evaluation on a custom built dataset, recorded with an advanced autonomous driving sensor setup, confirming the accuracy and robustness of our method.

Hashing for Structure-based Anomaly Detection

We focus on the problem of identifying samples in a set that do not conform to structured patterns represented by low-dimensional manifolds. An effective way to solve this problem is to embed data in a high dimensional space, called Preference Space, where anomalies can be identified as the most isolated points. In this work, we employ Locality Sensitive Hashing to avoid explicit computation of distances in high dimensions and thus improve Anomaly Detection efficiency. Specifically, we present an isolation-based anomaly detection technique designed to work in the Preference Space which achieves state-of-the-art performance at a lower computational cost. Code is publicly available at https://github.com/ineveLoppiliF/Hashing-for-Structure-based-Anomaly-Detection.

MultiLink: Multi-class Structure Recovery via Agglomerative Clustering and Model Selection

We address the problem of recovering multiple structures of different classes in a dataset contaminated by noise and outliers. In particular, we consider geometric structures defined by a mixture of underlying parametric models (e.g. planes and cylinders, homographies and fundamental matrices), and we tackle the robust fitting problem by preference analysis and clustering. We present a new algorithm, termed MultiLink, that simultaneously deals with multiple classes of models. MultiLink combines on-the-fly model fitting and model selection in a novel linkage scheme that determines whether two clusters are to be merged. The resulting method features many practical advantages with respect to methods based on preference analysis, being faster, less sensitive to the inlier threshold, and able to compensate limitations deriving from hypotheses sampling. Experiments on several public datasets demonstrate that Multi-Link favourably compares with state of the art alternatives, both in multi-class and single-class problems. Code is publicly made available for download.

Preference Isolation Forest for Structure-based Anomaly Detection

We address the problem of detecting anomalies as samples that do not conform to structured patterns represented by low-dimensional manifolds. To this end, we conceive a general anomaly detection framework called Preference Isolation Forest (PIF), that combines the benefits of adaptive isolation-based methods with the flexibility of preference embedding. The key intuition is to embed the data into a high-dimensional preference space by fitting low-dimensional manifolds, and to identify anomalies as isolated points. We propose three isolation approaches to identify anomalies: $i$) Voronoi-iForest, the most general solution, $ii$) RuzHash-iForest, that avoids explicit computation of distances via Local Sensitive Hashing, and $iii$) Sliding-PIF, that leverages a locality prior to improve efficiency and effectiveness.

PIF: Anomaly detection via preference embedding

We address the problem of detecting anomalies with respect to structured patterns. To this end, we conceive a novel anomaly detection method called PIF, that combines the advantages of adaptive isolation methods with the flexibility of preference embedding. Specifically, we propose to embed the data in a high dimensional space where an efficient tree-based method, PI-Forest, is employed to compute an anomaly score. Experiments on synthetic and real datasets demonstrate that PIF favorably compares with state-of-the-art anomaly detection techniques, and confirm that PI-Forest is better at measuring arbitrary distances and isolate points in the preference space.

A Multimodal Hybrid Late-Cascade Fusion Network for Enhanced 3D Object Detection

We present a new way to detect 3D objects from multimodal inputs, leveraging both LiDAR and RGB cameras in a hybrid late-cascade scheme, that combines an RGB detection network and a 3D LiDAR detector. We exploit late fusion principles to reduce LiDAR False Positives, matching LiDAR detections with RGB ones by projecting the LiDAR bounding boxes on the image. We rely on cascade fusion principles to recover LiDAR False Negatives leveraging epipolar constraints and frustums generated by RGB detections of separate views. Our solution can be plugged on top of any underlying single-modal detectors, enabling a flexible training process that can take advantage of pre-trained LiDAR and RGB detectors, or train the two branches separately. We evaluate our results on the KITTI object detection benchmark, showing significant performance improvements, especially for the detection of Pedestrians and Cyclists.