The Grow-Shrink strategy for learning Markov network structures constrained by context-specific independences

Markov networks are models for compactly representing complex probability distributions. They are composed by a structure and a set of numerical weights. The structure qualitatively describes independences in the distribution, which can be exploited to factorize the distribution into a set of compact functions. A key application for learning structures from data is to automatically discover knowledge. In practice, structure learning algorithms focused on "knowledge discovery" present a limitation: they use a coarse-grained representation of the structure. As a result, this representation cannot describe context-specific independences. Very recently, an algorithm called CSPC was designed to overcome this limitation, but it has a high computational complexity. This work tries to mitigate this downside presenting CSGS, an algorithm that uses the Grow-Shrink strategy for reducing unnecessary computations. On an empirical evaluation, the structures learned by CSGS achieve competitive accuracies and lower computational complexity with respect to those obtained by CSPC.

The IBMAP approach for Markov networks structure learning

In this work we consider the problem of learning the structure of Markov networks from data. We present an approach for tackling this problem called IBMAP, together with an efficient instantiation of the approach: the IBMAP-HC algorithm, designed for avoiding important limitations of existing independence-based algorithms. These algorithms proceed by performing statistical independence tests on data, trusting completely the outcome of each test. In practice tests may be incorrect, resulting in potential cascading errors and the consequent reduction in the quality of the structures learned. IBMAP contemplates this uncertainty in the outcome of the tests through a probabilistic maximum-a-posteriori approach. The approach is instantiated in the IBMAP-HC algorithm, a structure selection strategy that performs a polynomial heuristic local search in the space of possible structures. We present an extensive empirical evaluation on synthetic and real data, showing that our algorithm outperforms significantly the current independence-based algorithms, in terms of data efficiency and quality of learned structures, with equivalent computational complexities. We also show the performance of IBMAP-HC in a real-world application of knowledge discovery: EDAs, which are evolutionary algorithms that use structure learning on each generation for modeling the distribution of populations. The experiments show that when IBMAP-HC is used to learn the structure, EDAs improve the convergence to the optimum.

Learning Markov networks with context-specific independences

Learning the Markov network structure from data is a problem that has received considerable attention in machine learning, and in many other application fields. This work focuses on a particular approach for this purpose called independence-based learning. Such approach guarantees the learning of the correct structure efficiently, whenever data is sufficient for representing the underlying distribution. However, an important issue of such approach is that the learned structures are encoded in an undirected graph. The problem with graphs is that they cannot encode some types of independence relations, such as the context-specific independences. They are a particular case of conditional independences that is true only for a certain assignment of its conditioning set, in contrast to conditional independences that must hold for all its assignments. In this work we present CSPC, an independence-based algorithm for learning structures that encode context-specific independences, and encoding them in a log-linear model, instead of a graph. The central idea of CSPC is combining the theoretical guarantees provided by the independence-based approach with the benefits of representing complex structures by using features in a log-linear model. We present experiments in a synthetic case, showing that CSPC is more accurate than the state-of-the-art IB algorithms when the underlying distribution contains CSIs.

Markov random fields factorization with context-specific independences

Markov random fields provide a compact representation of joint probability distributions by representing its independence properties in an undirected graph. The well-known Hammersley-Clifford theorem uses these conditional independences to factorize a Gibbs distribution into a set of factors. However, an important issue of using a graph to represent independences is that it cannot encode some types of independence relations, such as the context-specific independences (CSIs). They are a particular case of conditional independences that is true only for a certain assignment of its conditioning set; in contrast to conditional independences that must hold for all its assignments. This work presents a method for factorizing a Markov random field according to CSIs present in a distribution, and formally guarantees that this factorization is correct. This is presented in our main contribution, the context-specific Hammersley-Clifford theorem, a generalization to CSIs of the Hammersley-Clifford theorem that applies for conditional independences.