Chemical Reaction Extraction from Long Patent Documents

The task of searching through patent documents is crucial for chemical patent recommendation and retrieval. This can be enhanced by creating a patent knowledge base (ChemPatKB) to aid in prior art searches and to provide a platform for domain experts to explore new innovations in chemical compound synthesis and use-cases. An essential foundational component of this KB is the extraction of important reaction snippets from long patents documents which facilitates multiple downstream tasks such as reaction co-reference resolution and chemical entity role identification. In this work, we explore the problem of extracting reactions spans from chemical patents in order to create a reactions resource database. We formulate this task as a paragraph-level sequence tagging problem, where the system is required to return a sequence of paragraphs that contain a description of a reaction. We propose several approaches and modifications of the baseline models and study how different methods generalize across different domains of chemical patents.

Detection of Malaria Vector Breeding Habitats using Topographic Models

Treatment of stagnant water bodies that act as a breeding site for malarial vectors is a fundamental step in most malaria elimination campaigns. However, identification of such water bodies over large areas is expensive, labour-intensive and time-consuming and hence, challenging in countries with limited resources. Practical models that can efficiently locate water bodies can target the limited resources by greatly reducing the area that needs to be scanned by the field workers. To this end, we propose a practical topographic model based on easily available, global, high-resolution DEM data to predict locations of potential vector-breeding water sites. We surveyed the Obuasi region of Ghana to assess the impact of various topographic features on different types of water bodies and uncover the features that significantly influence the formation of aquatic habitats. We further evaluate the effectiveness of multiple models. Our best model significantly outperforms earlier attempts that employ topographic variables for detection of small water sites, even the ones that utilize additional satellite imagery data and demonstrates robustness across different settings.

Variable Rate Video Compression using a Hybrid Recurrent Convolutional Learning Framework

In recent years, neural network-based image compression techniques have been able to outperform traditional codecs and have opened the gates for the development of learning-based video codecs. However, to take advantage of the high temporal correlation in videos, more sophisticated architectures need to be employed. This paper presents PredEncoder, a hybrid video compression framework based on the concept of predictive auto-encoding that models the temporal correlations between consecutive video frames using a prediction network which is then combined with a progressive encoder network to exploit the spatial redundancies. A variable-rate block encoding scheme has been proposed in the paper that leads to remarkably high quality to bit-rate ratios. By joint training and fine-tuning of this hybrid architecture, PredEncoder has been able to gain significant improvement over the MPEG-4 codec and has achieved bit-rate savings over the H.264 codec in the low to medium bit-rate range for HD videos and comparable results over most bit-rates for non-HD videos. This paper serves to demonstrate how neural architectures can be leveraged to perform at par with the highly optimized traditional methodologies in the video compression domain.