Connected and autonomous vehicles (CAVs) have garnered significant attention due to their extended perception range and enhanced sensing coverage. To address challenges such as blind spots and obstructions, CAVs employ vehicle-to-vehicle (V2V) communications to aggregate sensory data from surrounding vehicles. However, cooperative perception is often constrained by the limitations of achievable network throughput and channel quality. In this paper, we propose a channel-aware throughput maximization approach to facilitate CAV data fusion, leveraging a self-supervised autoencoder for adaptive data compression. We formulate the problem as a mixed integer programming (MIP) model, which we decompose into two sub-problems to derive optimal data rate and compression ratio solutions under given link conditions. An autoencoder is then trained to minimize bitrate with the determined compression ratio, and a fine-tuning strategy is employed to further reduce spectrum resource consumption. Experimental evaluation on the OpenCOOD platform demonstrates the effectiveness of our proposed algorithm, showing more than 20.19\% improvement in network throughput and a 9.38\% increase in average precision (AP@IoU) compared to state-of-the-art methods, with an optimal latency of 19.99 ms.