The Wisdom of a Crowd of Brains: A Universal Brain Encoder

Image-to-fMRI encoding is important for both neuroscience research and practical applications. However, such "Brain-Encoders" have been typically trained per-subject and per fMRI-dataset, thus restricted to very limited training data. In this paper we propose a Universal Brain-Encoder, which can be trained jointly on data from many different subjects/datasets/machines. What makes this possible is our new voxel-centric Encoder architecture, which learns a unique "voxel-embedding" per brain-voxel. Our Encoder trains to predict the response of each brain-voxel on every image, by directly computing the cross-attention between the brain-voxel embedding and multi-level deep image features. This voxel-centric architecture allows the functional role of each brain-voxel to naturally emerge from the voxel-image cross-attention. We show the power of this approach to (i) combine data from multiple different subjects (a "Crowd of Brains") to improve each individual brain-encoding, (ii) quick & effective Transfer-Learning across subjects, datasets, and machines (e.g., 3-Tesla, 7-Tesla), with few training examples, and (iii) use the learned voxel-embeddings as a powerful tool to explore brain functionality (e.g., what is encoded where in the brain).

A Penny for Your Thoughts: Self-Supervised Reconstruction of Natural Movies from Brain Activity

Reconstructing natural videos from fMRI brain recordings is very challenging, for two main reasons: (i) As fMRI data acquisition is difficult, we only have a limited amount of supervised samples, which is not enough to cover the huge space of natural videos; and (ii) The temporal resolution of fMRI recordings is much lower than the frame rate of natural videos. In this paper, we propose a self-supervised approach for natural-movie reconstruction. By employing cycle-consistency over Encoding-Decoding natural videos, we can: (i) exploit the full framerate of the training videos, and not be limited only to clips that correspond to fMRI recordings; (ii) exploit massive amounts of external natural videos which the subjects never saw inside the fMRI machine. These enable increasing the applicable training data by several orders of magnitude, introducing natural video priors to the decoding network, as well as temporal coherence. Our approach significantly outperforms competing methods, since those train only on the limited supervised data. We further introduce a new and simple temporal prior of natural videos, which - when folded into our fMRI decoder further - allows us to reconstruct videos at a higher frame-rate (HFR) of up to x8 of the original fMRI sample rate.

From voxels to pixels and back: Self-supervision in natural-image reconstruction from fMRI

Reconstructing observed images from fMRI brain recordings is challenging. Unfortunately, acquiring sufficient "labeled" pairs of {Image, fMRI} (i.e., images with their corresponding fMRI responses) to span the huge space of natural images is prohibitive for many reasons. We present a novel approach which, in addition to the scarce labeled data (training pairs), allows to train fMRI-to-image reconstruction networks also on "unlabeled" data (i.e., images without fMRI recording, and fMRI recording without images). The proposed model utilizes both an Encoder network (image-to-fMRI) and a Decoder network (fMRI-to-image). Concatenating these two networks back-to-back (Encoder-Decoder & Decoder-Encoder) allows augmenting the training with both types of unlabeled data. Importantly, it allows training on the unlabeled test-fMRI data. This self-supervision adapts the reconstruction network to the new input test-data, despite its deviation from the statistics of the scarce training data.