RAP: KV-Cache Compression via RoPE-Aligned Pruning

Long-context inference in large language models is increasingly bottlenecked by the memory and compute cost of the KV-Cache. Low-rank factorization compresses KV projections by writing $W \approx A * B$, where A produces latent KV states and B can be absorbed into downstream weights. In modern RoPE-based LLMs, this absorption fails: RoPE forces latent KV states to be reconstructed to full dimension, reintroducing substantial memory and compute overhead. We propose RoPE-Aligned Pruning (RAP), which prunes entire RoPE-aligned column pairs to preserve RoPE's 2x2 rotation structure, restore B absorption, and eliminate reconstruction. Our evaluation on LLaMA-3-8B and Mistral-7B shows that RAP enables joint reduction of KV-Cache, attention parameters, and FLOPs by 20-30%, all at once, while maintaining strong accuracy. Notably, RAP reduces attention latency to 83% (prefill) and 77% (decode) of baseline.

Toward Capturing Genetic Epistasis From Multivariate Genome-Wide Association Studies Using Mixed-Precision Kernel Ridge Regression

We exploit the widening margin in tensor-core performance between [FP64/FP32/FP16/INT8,FP64/FP32/FP16/FP8/INT8] on NVIDIA [Ampere,Hopper] GPUs to boost the performance of output accuracy-preserving mixed-precision computation of Genome-Wide Association Studies (GWAS) of 305K patients from the UK BioBank, the largest-ever GWAS cohort studied for genetic epistasis using a multivariate approach. Tile-centric adaptive-precision linear algebraic techniques motivated by reducing data motion gain enhanced significance with low-precision GPU arithmetic. At the core of Kernel Ridge Regression (KRR) techniques for GWAS lie compute-bound cubic-complexity matrix operations that inhibit scaling to aspirational dimensions of the population, genotypes, and phenotypes. We accelerate KRR matrix generation by redesigning the computation for Euclidean distances to engage INT8 tensor cores while exploiting symmetry.We accelerate solution of the regularized KRR systems by deploying a new four-precision Cholesky-based solver, which, at 1.805 mixed-precision ExaOp/s on a nearly full Alps system, outperforms the state-of-the-art CPU-only REGENIE GWAS software by five orders of magnitude.