Tracing Stereotypes in Pre-trained Transformers: From Biased Neurons to Fairer Models

The advent of transformer-based language models has reshaped how AI systems process and generate text. In software engineering (SE), these models now support diverse activities, accelerating automation and decision-making. Yet, evidence shows that these models can reproduce or amplify social biases, raising fairness concerns. Recent work on neuron editing has shown that internal activations in pre-trained transformers can be traced and modified to alter model behavior. Building on the concept of knowledge neurons, neurons that encode factual information, we hypothesize the existence of biased neurons that capture stereotypical associations within pre-trained transformers. To test this hypothesis, we build a dataset of biased relations, i.e., triplets encoding stereotypes across nine bias types, and adapt neuron attribution strategies to trace and suppress biased neurons in BERT models. We then assess the impact of suppression on SE tasks. Our findings show that biased knowledge is localized within small neuron subsets, and suppressing them substantially reduces bias with minimal performance loss. This demonstrates that bias in transformers can be traced and mitigated at the neuron level, offering an interpretable approach to fairness in SE.

Transformer-Based Multi-Modal Temporal Embeddings for Explainable Metabolic Phenotyping in Type 1 Diabetes

Type 1 diabetes (T1D) is a highly metabolically heterogeneous disease that cannot be adequately characterized by conventional biomarkers such as glycated hemoglobin (HbA1c). This study proposes an explainable deep learning framework that integrates continuous glucose monitoring (CGM) data with laboratory profiles to learn multimodal temporal embeddings of individual metabolic status. Temporal dependencies across modalities are modeled using a transformer encoder, while latent metabolic phenotypes are identified via Gaussian mixture modeling. Model interpretability is achieved through transformer attention visualization and SHAP-based feature attribution. Five latent metabolic phenotypes, ranging from metabolic stability to elevated cardiometabolic risk, were identified among 577 individuals with T1D. These phenotypes exhibit distinct biochemical profiles, including differences in glycemic control, lipid metabolism, renal markers, and thyrotropin (TSH) levels. Attention analysis highlights glucose variability as a dominant temporal factor, while SHAP analysis identifies HbA1c, triglycerides, cholesterol, creatinine, and TSH as key contributors to phenotype differentiation. Phenotype membership shows statistically significant, albeit modest, associations with hypertension, myocardial infarction, and heart failure. Overall, this explainable multimodal temporal embedding framework reveals physiologically coherent metabolic subgroups in T1D and supports risk stratification beyond single biomarkers.

A Defect is Being Born: How Close Are We? A Time Sensitive Forecasting Approach

Background. Defect prediction has been a highly active topic among researchers in the Empirical Software Engineering field. Previous literature has successfully achieved the most accurate prediction of an incoming fault and identified the features and anomalies that precede it through just-in-time prediction. As software systems evolve continuously, there is a growing need for time-sensitive methods capable of forecasting defects before they manifest. Aim. Our study seeks to explore the effectiveness of time-sensitive techniques for defect forecasting. Moreover, we aim to investigate the early indicators that precede the occurrence of a defect. Method. We will train multiple time-sensitive forecasting techniques to forecast the future bug density of a software project, as well as identify the early symptoms preceding the occurrence of a defect. Expected results. Our expected results are translated into empirical evidence on the effectiveness of our approach for early estimation of bug proneness.

What Were You Thinking? An LLM-Driven Large-Scale Study of Refactoring Motivations in Open-Source Projects

Context. Code refactoring improves software quality without changing external behavior. Despite its advantages, its benefits are hindered by the considerable cost of time, resources, and continuous effort it demands. Aim. Understanding why developers refactor, and which metrics capture these motivations, may support wider and more effective use of refactoring in practice. Method. We performed a large-scale empirical study to analyze developers refactoring activity, leveraging Large Language Models (LLMs) to identify underlying motivations from version control data, comparing our findings with previous motivations reported in the literature. Results. LLMs matched human judgment in 80% of cases, but aligned with literature-based motivations in only 47%. They enriched 22% of motivations with more detailed rationale, often highlighting readability, clarity, and structural improvements. Most motivations were pragmatic, focused on simplification and maintainability. While metrics related to developer experience and code readability ranked highest, their correlation with motivation categories was weak. Conclusions. We conclude that LLMs effectively capture surface-level motivations but struggle with architectural reasoning. Their value lies in providing localized explanations, which, when combined with software metrics, can form hybrid approaches. Such integration offers a promising path toward prioritizing refactoring more systematically and balancing short-term improvements with long-term architectural goals.

Do Prompt Patterns Affect Code Quality? A First Empirical Assessment of ChatGPT-Generated Code

Large Language Models (LLMs) have rapidly transformed software development, especially in code generation. However, their inconsistent performance, prone to hallucinations and quality issues, complicates program comprehension and hinders maintainability. Research indicates that prompt engineering-the practice of designing inputs to direct LLMs toward generating relevant outputs-may help address these challenges. In this regard, researchers have introduced prompt patterns, structured templates intended to guide users in formulating their requests. However, the influence of prompt patterns on code quality has yet to be thoroughly investigated. An improved understanding of this relationship would be essential to advancing our collective knowledge on how to effectively use LLMs for code generation, thereby enhancing their understandability in contemporary software development. This paper empirically investigates the impact of prompt patterns on code quality, specifically maintainability, security, and reliability, using the Dev-GPT dataset. Results show that Zero-Shot prompting is most common, followed by Zero-Shot with Chain-of-Thought and Few-Shot. Analysis of 7583 code files across quality metrics revealed minimal issues, with Kruskal-Wallis tests indicating no significant differences among patterns, suggesting that prompt structure may not substantially impact these quality metrics in ChatGPT-assisted code generation.

Towards Transparent and Accurate Diabetes Prediction Using Machine Learning and Explainable Artificial Intelligence

Diabetes mellitus (DM) is a global health issue of significance that must be diagnosed as early as possible and managed well. This study presents a framework for diabetes prediction using Machine Learning (ML) models, complemented with eXplainable Artificial Intelligence (XAI) tools, to investigate both the predictive accuracy and interpretability of the predictions from ML models. Data Preprocessing is based on the Synthetic Minority Oversampling Technique (SMOTE) and feature scaling used on the Diabetes Binary Health Indicators dataset to deal with class imbalance and variability of clinical features. The ensemble model provided high accuracy, with a test accuracy of 92.50% and an ROC-AUC of 0.975. BMI, Age, General Health, Income, and Physical Activity were the most influential predictors obtained from the model explanations. The results of this study suggest that ML combined with XAI is a promising means of developing accurate and computationally transparent tools for use in healthcare systems.

Data Preparation for Fairness-Performance Trade-Offs: A Practitioner-Friendly Alternative?

As machine learning (ML) systems are increasingly adopted across industries, addressing fairness and bias has become essential. While many solutions focus on ethical challenges in ML, recent studies highlight that data itself is a major source of bias. Pre-processing techniques, which mitigate bias before training, are effective but may impact model performance and pose integration difficulties. In contrast, fairness-aware Data Preparation practices are both familiar to practitioners and easier to implement, providing a more accessible approach to reducing bias. Objective. This registered report proposes an empirical evaluation of how optimally selected fairness-aware practices, applied in early ML lifecycle stages, can enhance both fairness and performance, potentially outperforming standard pre-processing bias mitigation methods. Method. To this end, we will introduce FATE, an optimization technique for selecting 'Data Preparation' pipelines that optimize fairness and performance. Using FATE, we will analyze the fairness-performance trade-off, comparing pipelines selected by FATE with results by pre-processing bias mitigation techniques.

Advances in Artificial Intelligence forDiabetes Prediction: Insights from a Systematic Literature Review

This systematic review explores the use of machine learning (ML) in predicting diabetes, focusing on datasets, algorithms, training methods, and evaluation metrics. It examines datasets like the Singapore National Diabetic Retinopathy Screening program, REPLACE-BG, National Health and Nutrition Examination Survey, and Pima Indians Diabetes Database. The review assesses the performance of ML algorithms like CNN, SVM, Logistic Regression, and XGBoost in predicting diabetes outcomes. The study emphasizes the importance of interdisciplinary collaboration and ethical considerations in ML-based diabetes prediction models.

From Expectation to Habit: Why Do Software Practitioners Adopt Fairness Toolkits?

As the adoption of machine learning (ML) systems continues to grow across industries, concerns about fairness and bias in these systems have taken center stage. Fairness toolkits, designed to mitigate bias in ML models, serve as critical tools for addressing these ethical concerns. However, their adoption in the context of software development remains underexplored, especially regarding the cognitive and behavioral factors driving their usage. As a deeper understanding of these factors could be pivotal in refining tool designs and promoting broader adoption, this study investigates the factors influencing the adoption of fairness toolkits from an individual perspective. Guided by the Unified Theory of Acceptance and Use of Technology (UTAUT2), we examined the factors shaping the intention to adopt and actual use of fairness toolkits. Specifically, we employed Partial Least Squares Structural Equation Modeling (PLS-SEM) to analyze data from a survey study involving practitioners in the software industry. Our findings reveal that performance expectancy and habit are the primary drivers of fairness toolkit adoption. These insights suggest that by emphasizing the effectiveness of these tools in mitigating bias and fostering habitual use, organizations can encourage wider adoption. Practical recommendations include improving toolkit usability, integrating bias mitigation processes into routine development workflows, and providing ongoing support to ensure professionals see clear benefits from regular use.

A Catalog of Fairness-Aware Practices in Machine Learning Engineering

Machine learning's widespread adoption in decision-making processes raises concerns about fairness, particularly regarding the treatment of sensitive features and potential discrimination against minorities. The software engineering community has responded by developing fairness-oriented metrics, empirical studies, and approaches. However, there remains a gap in understanding and categorizing practices for engineering fairness throughout the machine learning lifecycle. This paper presents a novel catalog of practices for addressing fairness in machine learning derived from a systematic mapping study. The study identifies and categorizes 28 practices from existing literature, mapping them onto different stages of the machine learning lifecycle. From this catalog, the authors extract actionable items and implications for both researchers and practitioners in software engineering. This work aims to provide a comprehensive resource for integrating fairness considerations into the development and deployment of machine learning systems, enhancing their reliability, accountability, and credibility.