Abstract:Recent research put a big effort in the development of deep learning architectures and optimizers obtaining impressive results in areas ranging from vision to language processing. However little attention has been addressed to the need of a methodological process of data collection. In this work we show that high quality data for supervised learning can be selected in an unsupervised manner and that by doing so one can obtain models capable to generalize better than in the case of random training set construction.
Abstract:Skull-stripping methods aim to remove the non-brain tissue from acquisition of brain scans in magnetic resonance (MR) imaging. Although several methods sharing this common purpose have been presented in literature, they all suffer from the great variability of the MR images. In this work we propose a novel approach based on Convolutional Neural Networks to automatically perform the brain extraction obtaining cutting-edge performance in the NFBS public database. Additionally, we focus on the efficient training of the neural network designing an effective data augmentation pipeline. Obtained results are evaluated through Dice metric, obtaining a value of 96.5%, and processing time, with 4.5s per volume.