Holographic generative flows with AdS/CFT

We present a framework for generative machine learning that leverages the holographic principle of quantum gravity, or to be more precise its manifestation as the anti-de Sitter/conformal field theory (AdS/CFT) correspondence, with techniques for deep learning and transport theory. Our proposal is to represent the flow of data from a base distribution to some learned distribution using the bulk-to-boundary mapping of scalar fields in AdS. In the language of machine learning, we are representing and augmenting the flow-matching algorithm with AdS physics. Using a checkerboard toy dataset and MNIST, we find that our model achieves faster and higher quality convergence than comparable physics-free flow-matching models. Our method provides a physically interpretable version of flow matching. More broadly, it establishes the utility of AdS physics and geometry in the development of novel paradigms in generative modeling.

ReMiDi: Reconstruction of Microstructure Using a Differentiable Diffusion MRI Simulator

We propose ReMiDi, a novel method for inferring neuronal microstructure as arbitrary 3D meshes using a differentiable diffusion Magnetic Resonance Imaging (dMRI) simulator. We first implemented in PyTorch a differentiable dMRI simulator that simulates the forward diffusion process using a finite-element method on an input 3D microstructure mesh. To achieve significantly faster simulations, we solve the differential equation semi-analytically using a matrix formalism approach. Given a reference dMRI signal $S_{ref}$, we use the differentiable simulator to iteratively update the input mesh such that it matches $S_{ref}$ using gradient-based learning. Since directly optimizing the 3D coordinates of the vertices is challenging, particularly due to ill-posedness of the inverse problem, we instead optimize a lower-dimensional latent space representation of the mesh. The mesh is first encoded into spectral coefficients, which are further encoded into a latent $\textbf{z}$ using an auto-encoder, and are then decoded back into the true mesh. We present an end-to-end differentiable pipeline that simulates signals that can be tuned to match a reference signal by iteratively updating the latent representation $\textbf{z}$. We demonstrate the ability to reconstruct microstructures of arbitrary shapes represented by finite-element meshes, with a focus on axonal geometries found in the brain white matter, including bending, fanning and beading fibers. Our source code will be made available online.